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Report for CCDS5613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5613.1 Public Homo sapiens 7 ZNF804B 24 110 108 CCDS HistoryNCBI Gene:219578Re-query CCDS DB by CCDS ID:5613.1Re-query CCDS DB by GeneID:219578See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333190.5 ENSP00000329638.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333190.5Link to Ensembl Protein Viewer:ENSP00000329638.4Re-query CCDS DB by Nucleotide ID:ENST00000333190Re-query CCDS DB by Protein ID:ENSP00000329638
Original member Current member NCBI NM_181646.5 NP_857597.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181646.5Link to Protein Sequence:NP_857597.1Re-query CCDS DB by Nucleotide ID:NM_181646Re-query CCDS DB by Protein ID:NP_857597Link to BLAST:NP_857597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_857597.1 1349 A4D1E1 1349 100% 0 0

Chromosomal Locations for CCDS 5613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 88759977 88760084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89218155 89218295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89327344 89327474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 89333363 89337032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4050 nt):
ATGGCTTGTTACCTGGTCATCAGTTCGAGACATCTCAGCAATGGGCACTACCGGGGCATTAAAGGAGTCT
TCAGGGGACCCCTGTGCAAGAACGGATCTCCCTCTCCGGATTTTGCAGAAAAGAAGTCCACAGCAAAGGC
CCTGGAAGATGTAAAGGCAAACTTTTACTGTGAATTATGTGACAAGCAGTATCACAAACACCAGGAGTTT
GACAATCATATTAATTCTTATGACCATGCTCATAAGCAGAGACTGAAAGAATTAAAGCAACGGGAATTTG
CTCGAAATGTAGCTTCTAAGTCATGGAAAGATGAGAAAAAACAAGAAAAAGCACTTAAACGACTTCATCA
GCTGGCTGAGTTAAGGCAGCAATCTGAATGTGTTTCTGGAAATGGACCAGCATACAAAGCCCCCAGGGTA
GCCATAGAAAAGCAACTCCAGCAAGGAATTTTCCCCATTAAGAATGGCAGAAAGGTATCATGCATGAAGA
GTGCTCTTCTCCTTAAAGGAAAAAATCTCCCCAGAATCATATCCGATAAACAGCGGTCCACCATGCCAAA
TCGACACCAATTACAATCAGACAGGCGTTGTTTGTTTGGAAATCAGGTACTGCAAACATCTTCAGATCTC
AGCAATGCAAATCACAGAACAGGAGTATCATTTACTTTTTCCAAAAAAGTGCACCTAAAATTAGAATCTT
CAGCATCAGTTTTCAGTGAGAACACAGAAGAAACCCATGATTGTAACAAGTCACCCATTTATAAAACAAA
ACAAACTGCAGATAAGTGCAAGTGCTGCAGGTTTGCAAATAAAGATACACACCTTACCAAGGAAAAAGAG
GTAAATATCTCACCAAGCCATCTGGAAAGTGTTTTACACAATACCATCTCCATAAACTCTAAAATTTTGC
AAGACAAACACGACTCTATTGATGAGACACTAGAAGATTCAATTGGCATTCATGCTTCATTCTCTAAATC
TAACATTCATCTTTCAGATGTAGATTTTACTCCTACCAGCAGAGAAAAAGAAACTAGAAATACATTGAAG
AACACTTTAGAAAATTGTGTTAATCACCCATGCCAAGCAAATGCTTCCTTCAGCCCACCAAACATTTACA
ACCATAGTGATGCCAGGATATCTGAATGCCTGGATGAGTTTTCATCACTGGAGCCAAGTGAACAAAAGAG
TACAGTGCATCTGAATCCAAATTCCAGAATAGAGAACAGAGAAAAATCTTTAGATAAAACAGAAAGAGTT
AGCAAAAATGTTCAAAGACTTGTAAAAGAAGCATGTACCCATAATGTGGCATCTAAACCACTACCTTTTC
TCCACGTTCAAAGCAAGGATGGCCACACCACTCTTCAATGGCCTACGGAACTTCTGCTCTTTACAAAAAC
AGAACCCTGTATCTCTTATGGCTGCAACCCACTGTATTTTGATTTTAAGCTTTCTCGGAACACAAAGGAA
GACCACAATCTAGAGGACTTAAAAACAGAATTGGGTAAGAAGCCCTTGGAATTGAAGACTAAAAGAGAGA
GCCAAGTCTCAGGTTTAACTGAAGACCAACAAAAATTGATCCAAGAAGATTATCAATATCCGAAACCAAA
GACGATGATAGCTAATCCGGATTGGGAAAAATTCCAGAGGAAATATAATTTGGACTACAGTGATTCTGAG
CCAAATAAGAGTGAATATACTTTCAGTGCAAATGATTTGGAAATGAAAAATCCTAAAGTGCCTCTTTACC
TCAACACATCTCTAAAGGATTGTGCTGGAAAGAATAATAGTAGTGAGAACAAACTTAAGGAAGCTTCAAG
GGCCCATTGGCAAGGCTGCAGAAAGGCAGTTCTAAATGATATAGATGAGGACCTATCTTTTCCTTCCTAC
ATCTCTAGGTTTAAAAAGCATAAATTGATTCCCTGCAGTCCTCATTTGGAATTTGAAGATGAAAGACAAT
TCAACTGCAAGTCCAGTCCTTGTACAGTAGGGGGTCACAGTGACCATGGGAAAGACTTCAGTGTAATTTT
GAAGAGTAACCACATCAGCATGACCAGCAAGGTTTCCGGATGTGGAAACCAAAGATACAAGAGATACTCT
CCACAGTCATGTTTGAGTAGATATTCTTCCTCTTTGGACACATCCCCTAGCAGCATGTCTAGCTTGAGAA
GTACTTGTTCAAGTCATAGATTCAATGGTAATAGCAGAGGTAATTTGCTCTGCTTCCATAAAAGAGAACA
CCACTCAGTTGAAAGGCACAAACGGAAATGTCTAAAGCACAACTGCTTCTACTTGTCTGATGATATAACA
AAGAGCAGCCAAATGCAGTCTGAACCACAGAAAGAGAGGAACTGCAAATTGTGGGAATCATTTAAAAATG
AAAAATACTCAAAACGTAGATATTGTCACTGCAGAGAAAGACAAAAACTGGGCAAAAATCAACAACAATT
TTCAGGGCTAAAATCTACGAGAATCATCTATTGTGATTCTAACTCACAGATTTCCTGTACTGGAAGCAGT
AAAAAACCACCTAATTGCCAGGGAACTCAGCACGACAGATTGGACTCTTACTCAATAGAGAAAATGTATT
ACTTGAATAAAAGCAAGAGAAATCAAGAGTCTTTGGGCAGCCCTCACATTTGTGATCTGGGAAAAGTCAG
GCCCATGAAGTGTAACTCCGGGAATATCAGCTGCCTTCTAAAGAACTGTTCCAGTGGCCCTTCAGAAACC
ACAGAATCAAACACTGCAGAAGGAGAGAGGACCCCTCTAACAGCAAAAATCCTTTTAGAAAGAGTACAAG
CCAAGAAATGTCAAGAACAATCAAGTAATGTTGAGATCTCTTCAAACAGTTGTAAAAGTGAATTAGAGGC
TCCTTCGCAAGTCCCATGCACAATTCAACTTGCACCATCAGGCTGTAACAGACAAGCATTGCCTTTGTCT
GAAAAAATACAGTATGCAAGTGAGAGCAGAAATGATCAAGACAGTGCAATTCCAAGGACTACGGAGAAAG
ACAAAAGCAAAAGTTCACACACAAATAATTTTACAATTTTAGCAGACACTGATTGTGATAACCATCTTTC
TAAAGGTATAATTCACCTAGTAACAGAGTCTCAGTCACTAAACATAAAAAGGGATGCAACAACAAAAGAA
CAATCAAAACCTTTAATTAGTGAAATCCAACCTTTTATTCAAAGCTGTGACCCAGTACCAAATGAATTCC
CTGGTGCTTTTCCGTCTAATAAATATACTGGTGTGACTGATTCAACAGAGACCCAAGAAGACCAAATAAA
TCTAGACTTACAGGATGTAAGCATGCATATAAATCATGTAGAGGGAAATATAAACTCTTACTATGACAGA
ACTATGCAGAAACCTGACAAAGTCGAAGACGGATTAGAAATGTGTCATAAATCTATCTCTCCCCCTTTAA
TTCAACAGCCCATAACATTTTCTCCTGACGAAATAGATAAATATAAGATCCTACAGCTACAAGCCCAGCA
GCATATGCAGAAGCAACTCCTATCAAAGCATCTTCGAGTTTTGCCTGCTGCAGGGCCTACTGCCTTCTCT
CCGGCCTCAACCGTACAGACAGTTCCAGTTCACCAGCACACTTCTATCACCACCATCCACCACACGTTCC
TGCAGCATTTTGCTGTTTCTGCTTCCTTAAGTTCTCATAGCAGTCACCTCCCTATTGCTCATCTACATCC
TCTTTCACAGGCACATTTCAGTCCTATTTCATTTTCGACTCTGACTCCAACCATTATCCCTGCACACCCC
ACTTTCTTAGCAGGTCATCCCCTGCATTTAGTAGCTGCTACCCCCTTCCACCCATCTCACATAACACTTC
AGCCTCTGCCCCCTACAGCATTTATTCCTACATTGTTTGGTCCTCACTTAAATCCAGCCACAACTTCTAT
CATCCACTTGAATCCTTTAATCCAACCAGTATTCCAAGGTCAAGATTTTTGCCATCATTCTTGCTCTAGC
CAGATGCAACAGCTAAATGAAGTGAAAGAGGCCTTAAATGTGTCCACACACTTGAACTAA

Translation (1349 aa):
MACYLVISSRHLSNGHYRGIKGVFRGPLCKNGSPSPDFAEKKSTAKALEDVKANFYCELCDKQYHKHQEF
DNHINSYDHAHKQRLKELKQREFARNVASKSWKDEKKQEKALKRLHQLAELRQQSECVSGNGPAYKAPRV
AIEKQLQQGIFPIKNGRKVSCMKSALLLKGKNLPRIISDKQRSTMPNRHQLQSDRRCLFGNQVLQTSSDL
SNANHRTGVSFTFSKKVHLKLESSASVFSENTEETHDCNKSPIYKTKQTADKCKCCRFANKDTHLTKEKE
VNISPSHLESVLHNTISINSKILQDKHDSIDETLEDSIGIHASFSKSNIHLSDVDFTPTSREKETRNTLK
NTLENCVNHPCQANASFSPPNIYNHSDARISECLDEFSSLEPSEQKSTVHLNPNSRIENREKSLDKTERV
SKNVQRLVKEACTHNVASKPLPFLHVQSKDGHTTLQWPTELLLFTKTEPCISYGCNPLYFDFKLSRNTKE
DHNLEDLKTELGKKPLELKTKRESQVSGLTEDQQKLIQEDYQYPKPKTMIANPDWEKFQRKYNLDYSDSE
PNKSEYTFSANDLEMKNPKVPLYLNTSLKDCAGKNNSSENKLKEASRAHWQGCRKAVLNDIDEDLSFPSY
ISRFKKHKLIPCSPHLEFEDERQFNCKSSPCTVGGHSDHGKDFSVILKSNHISMTSKVSGCGNQRYKRYS
PQSCLSRYSSSLDTSPSSMSSLRSTCSSHRFNGNSRGNLLCFHKREHHSVERHKRKCLKHNCFYLSDDIT
KSSQMQSEPQKERNCKLWESFKNEKYSKRRYCHCRERQKLGKNQQQFSGLKSTRIIYCDSNSQISCTGSS
KKPPNCQGTQHDRLDSYSIEKMYYLNKSKRNQESLGSPHICDLGKVRPMKCNSGNISCLLKNCSSGPSET
TESNTAEGERTPLTAKILLERVQAKKCQEQSSNVEISSNSCKSELEAPSQVPCTIQLAPSGCNRQALPLS
EKIQYASESRNDQDSAIPRTTEKDKSKSSHTNNFTILADTDCDNHLSKGIIHLVTESQSLNIKRDATTKE
QSKPLISEIQPFIQSCDPVPNEFPGAFPSNKYTGVTDSTETQEDQINLDLQDVSMHINHVEGNINSYYDR
TMQKPDKVEDGLEMCHKSISPPLIQQPITFSPDEIDKYKILQLQAQQHMQKQLLSKHLRVLPAAGPTAFS
PASTVQTVPVHQHTSITTIHHTFLQHFAVSASLSSHSSHLPIAHLHPLSQAHFSPISFSTLTPTIIPAHP
TFLAGHPLHLVAATPFHPSHITLQPLPPTAFIPTLFGPHLNPATTSIIHLNPLIQPVFQGQDFCHHSCSS
QMQQLNEVKEALNVSTHLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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