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Report for CCDS55982.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55982.1 Public Homo sapiens 16 CORO7 24 110 108 CCDS HistoryNCBI Gene:79585Re-query CCDS DB by CCDS ID:55982.1Re-query CCDS DB by GeneID:79585See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55982.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000574025.5 ENSP00000461702.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574025.5Link to Ensembl Protein Viewer:ENSP00000461702.1Re-query CCDS DB by Nucleotide ID:ENST00000574025Re-query CCDS DB by Protein ID:ENSP00000461702
Original member Current member NCBI NM_001201473.2 NP_001188402.1 Accepted alive Link to Nucleotide Sequence:NM_001201473.2Link to Protein Sequence:NP_001188402.1Re-query CCDS DB by Nucleotide ID:NM_001201473Re-query CCDS DB by Protein ID:NP_001188402Link to BLAST:NP_001188402.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001188402.1 840 P57737-2 840 100% 0 0

Chromosomal Locations for CCDS 55982.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4355158 4355163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4355286 4355372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4357168 4357259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4357968 4358103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4358367 4358483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4359296 4359385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4359480 4359621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4360278 4360363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4360444 4360548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4360943 4361085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4361162 4361248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4361361 4361469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4361985 4362160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4362612 4362738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4364276 4364413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4364597 4364689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4364775 4364920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4365003 4365060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4365491 4365545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4387986 4388068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4388545 4388631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4395289 4395339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4405491 4405567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4412356 4412430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4413308 4413404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4416459 4416518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2523 nt):
ATGAACCGCTTCAGGGTGTCCAAGTTCCGGCACACCGAGGCTCGGCCGCCCCGCCGCGAGTCCTGGATCA
GTGACATTCGAGCAGGAACCGCCCCTTCATGCAGGAACCACATCAAATCAAGCTGCAGCTTGATCGCCTT
CAACTCCGACCGTCCTGGTGTACTGGGCATTGTGCCTCTGCAAGGCCAAGGAGAGGACAAGCGACGCGTG
GCCCACCTGGGCTGCCATTCAGAGCTGGCAGCCCATGGGGACCTGGTGCAGAGCGCCGTCTGGAGCCGAG
ATGGAGCCCTGGTGGGCACGGCGTGCAAGGACAAGCAGCTGCGGATCTTTGACCCCAGAACAAAGCCGCG
GGCCTCTCAGAGCACGCAGGCCCATGAGAACAGCAGGGATAGCCGGCTGGCATGGATGGGCACCTGGGAG
CACCTTGTGTCTACTGGATTCAACCAGATGCGTGAGCGCGAAGTGAAGCTGTGGGACACGCGGTTCTTCT
CCAGCGCCCTGGCCTCCCTCACCTTGGACACCTCGCTTGGGTGTCTCGTGCCTCTGCTGGACCCTGACTC
TGGGCTCCTGGTCCTGGCAGGAAAGGGCGAGAGGCAGCTGTACTGTTACGAGGTGGTCCCGCAGCAGCCG
GCGCTGAGCCCAGTGACCCAGTGTGTCCTGGAGAGCGTGCTGCGTGGGGCTGCCCTTGTGCCCCGGCAGG
CGCTGGCCGTCATGAGCTGCGAGGTACTCCGCGTCCTACAGCTGAGCGACACAGCCATCGTGCCCATCGG
CTACCATGTGCCCCGCAAGGCTGTGGAGTTCCACGAGGACCTGTTCCCGGACACTGCCGGCTGTGTGCCT
GCCACCGACCCCCATAGCTGGTGGGCTGGGGACAACCAGCAGGTGCAGAAGGTCAGCCTCAACCCCGCCT
GCCGGCCCCACCCGAGCTTCACTTCCTGTCTGGTGCCCCCTGCGGAGCCCCTCCCTGACACAGCCCAGCC
TGCGGTGATGGAGACACCCGTGGGTGATGCAGACGCAAGCGAGGGTTTCTCTTCCCCTCCCAGTTCGCTG
ACCTCGCCCTCCACGCCCTCCAGCCTGGGGCCCTCACTCTCCAGCACCAGTGGCATCGGGACCAGCCCCA
GTTTGAGGTCGCTGCAGAGCCTGCTGGGCCCCAGTTCCAAGTTCCGCCATGCTCAGGGCACTGTCCTGCA
CCGAGACAGCCACATCACCAACCTCAAGGGGCTCAACCTCACCACACCTGGTGAGAGTGACGGCTTCTGT
GCCAACAAGCTGCGTGTGGCCGTGCCGCTGCTCAGCAGCGGGGGACAGGTGGCTGTGCTTGAGCTACGGA
AGCCTGGCCGCCTGCCCGACACGGCACTGCCCACGCTGCAGAATGGGGCAGCTGTGACTGATCTGGCCTG
GGACCCCTTTGACCCCCATCGCCTCGCTGTGGCTGGTGAGGACGCCAGGATCCGACTGTGGCGGGTACCC
GCAGAGGGCCTGGAAGAGGTGCTCACCACGCCAGAGACTGTGCTCACAGGCCACACGGAGAAGATCTGCT
CCCTGCGCTTCCACCCACTGGCAGCCAATGTGCTGGCCTCGTCCTCCTATGACCTCACTGTTCGCATCTG
GGACCTTCAGGCTGGAGCTGATCGGCTGAAGCTGCAGGGCCACCAAGACCAGATCTTCAGCCTGGCCTGG
AGTCCTGATGGGCAGCAGCTGGCCACTGTCTGCAAGGATGGGCGTGTGCGGGTCTACAGGCCCCGGAGTG
GCCCTGAGCCCCTGCAGGAAGGCCCAGGGCCCAAGGGAGGACGCGGAGCTCGCATTGTCTGGGTATGTGA
TGGTCGCTGTCTGCTGGTGTCTGGCTTTGACAGCCAAAGTGAGCGCCAGCTGCTCCTATATGAAGCTGAG
GCCCTGGCCGGCGGACCCTTGGCAGTGTTGGGCCTGGACGTGGCTCCCTCAACCCTGCTGCCCAGCTACG
ACCCAGACACTGGCCTGGTGCTCCTGACCGGCAAGGGCGACACCCGTGTATTCCTGTACGAGCTGCTCCC
CGAGTCCCCTTTCTTCCTGGAGTGCAACAGCTTCACGTCGCCTGACCCCCACAAGGGCCTCGTCCTCCTG
CCTAAGACGGAGTGCGACGTGCGGGAAGTGGAGCTGATGCGGTGCCTGCGGCTGCGTCAGTCCTCCCTGG
AGCCTGTGGCCTTCCGGCTGCCCCGAGTCCGGAAAGAGTTCTTCCAGGATGACGTGTTCCCAGACACGGC
TGTGATCTGGGAGCCTGTGCTCAGTGCCGAGGCCTGGCTGCAAGGCGCTAATGGGCAGCCCTGGCTTCTC
AGCCTGCAGCCTCCTGACATGAGCCCAGTGAGCCAAGCCCCCCGAGAGGCCCCTGCTCGTCGGGCCCCAT
CCTCAGCGCAGTACCTGGAAGAAAAGTCTGACCAGCAAAAGAAGGAGGAGCTGCTGAATGCCATGGTGGC
AAAACTGGGGAACCGGGAGGACCCACTCCCCCAGGACTCCTTTGAAGGCGTGGACGAGGACGAGTGGGAC
TAG

Translation (840 aa):
MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPLQGQGEDKRRV
AHLGCHSELAAHGDLVQSAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWE
HLVSTGFNQMREREVKLWDTRFFSSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQP
ALSPVTQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVP
ATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVGDADASEGFSSPPSSL
TSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSHITNLKGLNLTTPGESDGFC
ANKLRVAVPLLSSGGQVAVLELRKPGRLPDTALPTLQNGAAVTDLAWDPFDPHRLAVAGEDARIRLWRVP
AEGLEEVLTTPETVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAW
SPDGQQLATVCKDGRVRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVSGFDSQSERQLLLYEAE
ALAGGPLAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPESPFFLECNSFTSPDPHKGLVLL
PKTECDVREVELMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLL
SLQPPDMSPVSQAPREAPARRAPSSAQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFEGVDEDEWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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