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Report for CCDS55386.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55386.1 Public Homo sapiens X MAP7D2 24 110 108 CCDS HistoryNCBI Gene:256714Re-query CCDS DB by CCDS ID:55386.1Re-query CCDS DB by GeneID:256714See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55386.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379643.10 ENSP00000368964.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379643.10Link to Ensembl Protein Viewer:ENSP00000368964.5Re-query CCDS DB by Nucleotide ID:ENST00000379643Re-query CCDS DB by Protein ID:ENSP00000368964
Original member Current member NCBI NM_001168465.2 NP_001161937.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001168465.2Link to Protein Sequence:NP_001161937.1Re-query CCDS DB by Nucleotide ID:NM_001168465Re-query CCDS DB by Protein ID:NP_001161937Link to BLAST:NP_001161937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161937.1 773 Q96T17-2 773 100% 0 0

Chromosomal Locations for CCDS 55386.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 20010803 20011052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20012349 20012535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20013054 20013132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20013569 20013625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20015223 20015327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20016094 20016325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20024951 20025083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20025681 20025952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20042502 20042629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20044364 20044524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20050824 20050946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20052878 20052988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20056680 20056791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20063414 20063577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20064728 20064805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20116750 20116879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2322 nt):
ATGGAGCGCGGCGGCGGCGGCTCCGGGACGGGATCCCGGCCTGAGGGGACTGCGCGGGGAACCTCTCTCC
CAGGGAAGATCGCAGAACCGGGCGCGGTGCGGACCTCTCAGCCCAACTACCGGCCTCAAGGCATGGAGGG
ATTTTTGAAATCAGATGAGAGGCAGAGATTGGCCAAAGAAAGACGAGAAGAAAGAGAAAAATGTCTGGCT
GCTCGGGAGCAACAGATCCTGGAGAAACAGAAAAGAGCCAGGCTGCAGTACGAAAAGCAAATGGAGGAGC
GATGGCGAAAACTGGAAGAGCAGCGGCAGCGGGAGGACCAAAAGAGAGCTGCTGTGGAAGAGAAAAGGAA
ACAGAAGCTCCGGGAGGAGGAGGAACGGCTGGAGGCGATGATGCGCCGGTCCCTGGAGCGCACACAGCAG
CTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCATGTG
ACAAACTTTCAACATCAACTATGAGTTTGCCAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGTCTTC
ATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCATCACATGCACCTTAGTCCAATGGAAGCCATT
CTTGTTTCGCGACTGTTGACACCCACACAGTCTTCTTTAGCCAGAAGCAGAGCTTCAGTCATGCTCTCTG
GGCAGGCCAATGATTCAGTATTCCATGTCTGTCCTCGTTTAGCTCCTCTTGGCCCTCTTAACCCTTCTTA
CAAGTCTTCACCCACTCGAAACATTGAGAAGAAGAAAGCTACATCTACGTCTACATCTGGTGCAGGAGAT
GTTGGGAAAGAAGCCCTTTCAGGAGGAGAGGCCTCTCTGGTGGAGAAGGTGAAGCGGGGGCAACGAACAG
CAACTTCTCTTCCTGTTGTGAACTTCGGGTCCCCTCTGAGAAGATGTGAGTTTTCTGGAGGCATTCCTAA
GAGACCATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACAACGAAA
CCTCCCTACCCAGGGTCTCCTGTGAAGTACCGCTTACCTGCCCTTTCTGGCCAAGACATGCCCAAGAGGA
AAGCGGAGAAAGAGAAGAGCAACAAGGAAAGGGAAGGTACCTTGGCTCAGCAGGCTGCTGGCCCGCAAGG
AGAGGAAGCCCTAGAGAAGCATGTAGTGGACAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGGAGGG
AAAGCCGAAAACAGCGCAGCCTTGGGGAAGCCCACAGCAGGCACCACTGATGCAGGAGAGGCTGCGAAGA
TCTTGGCTGAAAAGAGAAGACAGGCCCGGCTGCAGAAGGAACAGGAGGAGCAAGAACGACTGGAGAAGGA
AGAACAAGATAGGCTGGAGAGAGAGGAATTGAAAAGAAAGGCAGAGGAGGAAAGGCTTCGCCTAGAAGAG
GAAGCCCGAAAGCAGGAAGAAGAAAGGAAGCGGCAGGAAGAGGAAAAGAAAAAACAGGAAGGGGAAGAGA
AAAGAAAGGCAGGCGAGGAGGCCAAGCGGAAGGCTGAGGAGGAGCTGTTGTTGAAAGAAAAGCAAGAACA
AGAAAAACAAGAGAAAGCCATGATTGAAAAGCAGAAAGAAGCAGCAGAAACAAAGGCCCGGGAGGTAGCT
GAACAGATGCGTCTCGAGAGAGAACAGATTATGCTGCAGATTGAGCAGGAGAGACTGGAGAGAAAGAAGA
GAATAGATGAAATCATGAAGAGAACAAGGAAAAGTGATGTGTCTCCACAAGTGAAGAAAGAAGACCCCAA
AGTGGGGGTCCAGCCTGCTGTGTGTGTGGAAAAGAAGACAAAACTGGTTGTCCCCAACAAAATGGAAATC
AATGGATTGAACACCTGCCAGGAAGTTAATGGTGTGGATCACGCTGCCCCAGAAACTTATCCCCAAGACA
TTTTCTCTAATGGGCTTAAGCCAGCTGGGGGACTCATTCATCTGGATGCCCTTGATGGGAAATCAAATAG
CCTGGATGATTCAACTGAAGAAGTTCAGTCTATGGATGTGAGTCCTGTTTCAAAAGAAGAGCTTATCTCT
ATCCCGGAATTTTCACCAGTGAGTGAAATGATTCCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAATG
CCCGAGCACTTCAAGATCTCTTAGATTTCACTGGTCCCCCGACATTCCCCAAGAGATCCAGTGAAAATCT
CAGCCTGGACGACTGTAACAAAAACCTTATCGAAGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAAC
ACCTTCTGTTGA

Translation (773 aa):
MERGGGGSGTGSRPEGTARGTSLPGKIAEPGAVRTSQPNYRPQGMEGFLKSDERQRLAKERREEREKCLA
AREQQILEKQKRARLQYEKQMEERWRKLEEQRQREDQKRAAVEEKRKQKLREEEERLEAMMRRSLERTQQ
LELKKKYSWGAPLAIGPGGHDACDKLSTSTMSLPKPTEPPMNKRLSSSTVAISYSPDRAHHMHLSPMEAI
LVSRLLTPTQSSLARSRASVMLSGQANDSVFHVCPRLAPLGPLNPSYKSSPTRNIEKKKATSTSTSGAGD
VGKEALSGGEASLVEKVKRGQRTATSLPVVNFGSPLRRCEFSGGIPKRPSSPVISKTATKAYPQSPKTTK
PPYPGSPVKYRLPALSGQDMPKRKAEKEKSNKEREGTLAQQAAGPQGEEALEKHVVDKHASEKHAAAAGG
KAENSAALGKPTAGTTDAGEAAKILAEKRRQARLQKEQEEQERLEKEEQDRLEREELKRKAEEERLRLEE
EARKQEEERKRQEEEKKKQEGEEKRKAGEEAKRKAEEELLLKEKQEQEKQEKAMIEKQKEAAETKAREVA
EQMRLEREQIMLQIEQERLERKKRIDEIMKRTRKSDVSPQVKKEDPKVGVQPAVCVEKKTKLVVPNKMEI
NGLNTCQEVNGVDHAAPETYPQDIFSNGLKPAGGLIHLDALDGKSNSLDDSTEEVQSMDVSPVSKEELIS
IPEFSPVSEMIPGVSLDQNGTGNARALQDLLDFTGPPTFPKRSSENLSLDDCNKNLIEGFNSPGQETPLN
TFC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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