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Report for CCDS54646.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54646.1 Public Homo sapiens 3 ARMC8 24 110 108 CCDS HistoryNCBI Gene:25852Re-query CCDS DB by CCDS ID:54646.1Re-query CCDS DB by GeneID:25852See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54646.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000481646.5 ENSP00000420333.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481646.5Link to Ensembl Protein Viewer:ENSP00000420333.1Re-query CCDS DB by Nucleotide ID:ENST00000481646Re-query CCDS DB by Protein ID:ENSP00000420333
Original member Current member NCBI NM_015396.6 NP_056211.2 Accepted alive Link to Nucleotide Sequence:NM_015396.6Link to Protein Sequence:NP_056211.2Re-query CCDS DB by Nucleotide ID:NM_015396Re-query CCDS DB by Protein ID:NP_056211Link to BLAST:NP_056211.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056211.2 659 Q8IUR7-2 659 100% 0 0

Chromosomal Locations for CCDS 54646.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138188528 138188530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138209817 138209893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138221926 138221997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138223389 138223531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138223636 138223733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138228918 138229010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138235034 138235114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138237309 138237384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138237482 138237572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138239468 138239528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138241783 138241983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138245088 138245183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138263739 138263821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138264131 138264212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138267155 138267241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138270040 138270132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138272967 138273116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138274449 138274544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138284431 138284526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138289048 138289120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138290546 138290639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138295859 138295892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1980 nt):
ATGGAAGTAACAGCTAGCAGTCGCCACTATGTTGACAGGCTATTTGACCCTGATCCCCAGAAAGTTCTAC
AAGGTGTCATAGACATGAAAAATGCTGTAATTGGAAACAACAAGCAGAAAGCCAATCTCATTGTTTTAGG
AGCTGTTCCAAGATTGTTGTACTTGCTTCAGCAAGAAACCTCAAGCACAGAGCTGAAAACTGAATGTGCA
GTGGTGTTGGGAAGTCTTGCTATGGGTACTGAAAACAATGTCAAGTCTCTACTGGACTGCCATATTATCC
CTGCCTTATTGCAAGGACTACTGTCCCCAGACCTGAAGTTTATTGAAGCTTGCCTCCGATGCCTGCGTAC
CATCTTCACCAGTCCTGTCACTCCAGAGGAGCTACTGTATACAGATGCCACAGTGATACCACACCTCATG
GCACTGCTTAGCAGGTCCCGCTATACCCAGGAGTACATCTGTCAGATCTTCTCACACTGCTGTAAAGGGC
CAGATCATCAAACAATTTTATTTAACCACGGTGCAGTTCAGAATATTGCTCACCTACTAACCTCACTGTC
CTACAAAGTTCGAATGCAAGCACTGAAATGTTTCTCAGTTTTAGCTTTTGAAAACCCCCAGGTATCGATG
ACCCTGGTAAATGTTTTGGTTGATGGAGAATTGTTACCACAGATTTTTGTGAAGATGTTACAGAGGGATA
AGCCTATTGAGATGCAGCTCACATCAGCAAAATGTTTAACTTACATGTGTAGAGCTGGAGCAATTCGGAC
AGATGATAACTGTATTGTATTAAAGACATTACCTTGTTTGGTTCGAATGTGCAGTAAGGAGAGATTACTA
GAGGAGAGAGTTGAAGGAGCTGAGACACTTGCCTATCTGATTGAACCAGATGTTGAGCTACAGAGAATCG
CTAGCATAACTGATCACCTCATTGCCATGCTTGCTGATTATTTCAAGTATCCCAGCTCAGTGAGTGCCAT
CACTGATATTAAAAGGCTTGATCATGATTTAAAACATGCTCACGAACTCCGCCAGGCTGCATTCAAGCTC
TATGCCTCTCTTGGAGCAAATGATGAAGACATCCGGAAGAAGATCATTGAGACTGAAAATATGATGGACC
GAATTGTGACTGGCTTGTCTGAGTCTAGTGTCAAGGTGCGGTTAGCTGCCGTCAGATGTTTGCACAGTTT
ATCCAGATCTGTGCAGCAGCTTCGAACCAGTTTCCAGGATCATGCTGTTTGGAAACCTTTAATGAAGGTT
TTACAAAATGCACCAGATGAAATCCTAGTGGTAGCATCTTCCATGCTGTGTAATCTTCTTCTTGAATTTT
CTCCAAGCAAAGAGCCAATTTTGGAATCAGGAGCCGTAGAGCTACTTTGTGGATTAACTCAGAGTGAAAA
TCCTGCTTTACGAGTGAATGGAATTTGGGCTTTAATGAATATGGCATTTCAGGCTGAACAAAAAATAAAA
GCAGATATTTTACGAAGCTTGAGTACTGAACAGCTATTCCGGTTATTATCAGATTCAGATTTGAATGTGC
TGATGAAGACATTGGGACTTCTTAGAAATCTCCTCTCCACTCGTCCTCATATAGATAAAATAATGAGTAC
TCATGGAAAGCAAATTATGCAAGCCGTCACTCTTATTCTAGAAGGGGAACATAACATTGAGGTCAAAGAG
CAGACACTGTGCATCTTAGCCAACATAGCGGATGGGACAACAGCAAAAGATCTTATTATGACCAATGATG
ATATCCTACAGAAAATCAAGTATTACATGGGCCATTCACATGTTAAACTGCAGCTTGCAGCCATGTTTTG
TATATCAAACCTCATATGGAATGAAGAGGAAGGTTCACAAGAACGCCAGGATAAATTACGAGACATGGGC
ATCGTAGATATTCTACACAAACTGAGTCAGTCACCAGATTCAAACCTTTGTGACAAGGCAAAGATGGCAC
TGCAGCAGTACCTGGCATGA

Translation (659 aa):
MEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLLQQETSSTELKTECA
VVLGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLKFIEACLRCLRTIFTSPVTPEELLYTDATVIPHLM
ALLSRSRYTQEYICQIFSHCCKGPDHQTILFNHGAVQNIAHLLTSLSYKVRMQALKCFSVLAFENPQVSM
TLVNVLVDGELLPQIFVKMLQRDKPIEMQLTSAKCLTYMCRAGAIRTDDNCIVLKTLPCLVRMCSKERLL
EERVEGAETLAYLIEPDVELQRIASITDHLIAMLADYFKYPSSVSAITDIKRLDHDLKHAHELRQAAFKL
YASLGANDEDIRKKIIETENMMDRIVTGLSESSVKVRLAAVRCLHSLSRSVQQLRTSFQDHAVWKPLMKV
LQNAPDEILVVASSMLCNLLLEFSPSKEPILESGAVELLCGLTQSENPALRVNGIWALMNMAFQAEQKIK
ADILRSLSTEQLFRLLSDSDLNVLMKTLGLLRNLLSTRPHIDKIMSTHGKQIMQAVTLILEGEHNIEVKE
QTLCILANIADGTTAKDLIMTNDDILQKIKYYMGHSHVKLQLAAMFCISNLIWNEEEGSQERQDKLRDMG
IVDILHKLSQSPDSNLCDKAKMALQQYLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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