NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5391.1 Public Homo sapiens 7 OSBPL3 24 110 108 CCDS HistoryNCBI Gene:26031Re-query CCDS DB by CCDS ID:5391.1Re-query CCDS DB by GeneID:26031See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396431.5 ENSP00000379708.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396431.5Link to Ensembl Protein Viewer:ENSP00000379708.1Re-query CCDS DB by Nucleotide ID:ENST00000396431Re-query CCDS DB by Protein ID:ENSP00000379708
Original member Current member NCBI NM_145320.2 NP_663160.1 Accepted alive Link to Nucleotide Sequence:NM_145320.2Link to Protein Sequence:NP_663160.1Re-query CCDS DB by Nucleotide ID:NM_145320Re-query CCDS DB by Protein ID:NP_663160Link to BLAST:NP_663160.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663160.1 856 Q9H4L5-2 856 100% 0 0

Chromosomal Locations for CCDS 5391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24800183 24800279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24804315 24804437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24806776 24806902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24809807 24809951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24815059 24815203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24816610 24816688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24820175 24820238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24830768 24830905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24834486 24834736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24840690 24840783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24842279 24842413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24849069 24849176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24852504 24852634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24861613 24861769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24863496 24863599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24865342 24865465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24866070 24866237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24870732 24870845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24871742 24871795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24871953 24872069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24892377 24892472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2571 nt):
ATGATGAGTGATGAGAAGAACCTTGGTGTGTCCCAAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT
GC
TCTTCCAAGCAAGGAAGTCGACAGGACAGCTGGGAAGTGGTGGAAGGACTGAGGGGGGAGATGAATTA
C
ACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCTGAAAAAGAGGAAGTGGCCCTTAAAAGGCTGGCAT
AAG
AGATTCTTCTATCTGGACAAAGGAATCTTGAAATATGCCAAGAGCCAAACCGATATAGAGAGAGAGA
AG
CTGCATGGCTGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAGAAGTCATCAAAATGCATAGACCT
T
GACACCGAGGAGCACATCTACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGATGAGTGGGTATCGAAA
CTT
CGCCACCACAGAATGTATCGTCAGAATGAAATTGCCATGTTTCCACATGAAGTTAACCACTTTTTCT
CA
GGGTCCACCATCACAGACTCTTCATCTGGGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCAGTAT
A
TCAAAGCAGAATTTATTTCAAACTGGAAGCAATGTATCATTTTCTTGTGGTGGTGAGACACGAGTTCCA
TTA
TGGTTACAGTCTTCAGAGGACATGGAAAAATGCTCCAAAGACCTGGCGCACTGTCATGCCTACCTGG
TA
GAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGC
C
ATCCAGGTCCCGAAACCTTTTTCTGGCCCAGTAAGACTACACTCCTCCAATCCTAATTTGTCAACACTA
GAT
TTTGGAGAAGAGAAAAATTATTCTGATGGCTCTGAAACCTCATCAGAGTTTTCTAAAATGCAAGAAG
AT
CTGTGTCATATTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCTTTTAATATCATGTCAGCGGAGAG
A
GAGAAACTGAAGCAGCTGATGGAGCAGGATGCCTCCTCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAG
AAC
GCCCTGTCATCCGCCCTAGCACAAAACACAGATCTTAAAGAACGCTTACGCAGAATCCATGCCGAGT
CT
CTGCTCCTCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCTGGCAGAGGAAAACTCCAGAGATGA
A
AACCGAGCTCTAGTTCATCAGCTTTCTAATGAAAGTAGACTCTCCATCACTGACTCCCTTTCTGAGTTT
TTT
GATGCTCAGGAAGTTCTGTTATCTCCAAGCTCTTCAGAAAACGAGATTTCTGATGATGACTCATATG
TC
AGTGACATAAGTGATAATCTTTCCTTAGATAATCTCAGTAATGATTTAGATAATGAGAGACAGACCTT
G
GGGCCTGTCCTTGATAGTGGTCGGGAAGCGAAGTCCCGGAGAAGAACGTGCCTGCCGGCGCCCTGCCCG
AGC
AGCAGTAACATCAGCCTGTGGAACATCCTGAGGAACAACATCGGGAAGGACCTGTCCAAGGTGGCCA
TG
CCGGTGGAGCTGAACGAGCCCCTGAACACGCTGCAGAGGCTCTGCGAGGAGCTGGAGTACAGCGAGCT
C
CTGGACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGATGGTATATGTGGCAGCCTTTGCCATATCA
GCG
TATGCATCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACATATGAAT
GT
ATTCGGGAGGACAAGGGCTTCCAGTTTTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGCGTG
T
CATGCTGAGTCTAGAAATTTTGTTTTCTGGCAAGATGTGAGATGGAAAAACAAATTCTGGGGCAAATCC
ATG
GAAATTGTTCCAATTGGCACAACCCATGTGACTCTGCCAGTTTTTGGGGATCATTTTGAGTGGAACA
AA
GTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGCACTATGGAGAGATTGTCAT
C
AAGAACCTGCATGATGATTCCTGCTACTGCAAAGTGAATTTTATAAAGGCAAAATACTGGAGCACTAAT
GCC
CATGAGATTGAAGGCACAGTGTTTGACAGGAGTGGAAAAGCGGTTCATCGGCTGTTTGGGAAATGGC
AT
GAAAGCATCTACTGTGGCGGCGGCTCCTCTTCTGCCTGTGTATGGAGAGCAAATCCTATGCCGAAAGG
C
TACGAGCAATACTATAGCTTCACACAGTTTGCGCTGGAATTAAATGAAATGGATCCATCATCAAAGTCT
TTA
TTGCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAACTTAGAAGAAG
CT
GAAATACAAAAGCAGAGGATTGAACAACTGCAGAGAGAAAGGCGGCGGGTCTTAGAAGAAAATCATGT
G
GAGCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAA
CTT
AGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGA


Translation (856 aa):
MMSDEKNLGVSQKLVSPSRSTSSCSSKQGSRQDSWEVVEGLRGEMNYTQEPPVQKGFLLKKRKWPLKGWH
K
RFFYLDKGILKYAKSQTDIEREKLHGCIDVGLSVMSVKKSSKCIDLDTEEHIYHLKVKSEEVFDEWVSK
L
RHHRMYRQNEIAMFPHEVNHFFSGSTITDSSSGVFDSISSRK
RSSISKQNLFQTGSNVSFSCGGETRVP
L
WLQSSEDMEKCSK
DLAHCHAYLVEMSQLLQSMDVLHRTYSAPAINAIQVPKPFSGPVRLHSSNPNLSTL
D
FGEEKNYSDGSETSSEFSKMQEDLCHIAHK
VYFTLRSAFNIMSAEREKLKQLMEQDASSSPSAQVIGLK
N
ALSS
ALAQNTDLKERLRRIHAESLLLDSPAVAKSGDNLAEENSRDENRALVHQLSNESRLSITDSLSEF
F
DAQEVLLSPSSSENE
ISDDDSYVSDISDNLSLDNLSNDLDNERQTLGPVLDSGREAKSRRRTCLPAPCP
S
SSNISLWNILRNNIGKDLSKVAMPVELNEPLNTLQRLCEELEYSELLDKAAQIPSPLERM
VYVAAFAIS
A
YASSYYRAGSKPFNPVLGETYECIREDKGFQFFSEQ
VSHHPPISACHAESRNFVFWQDVRWKNKFWGKS
M
EIVPIGTTHVTLP
VFGDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNLHDDSCYCKVNFIKAKYWSTN
A
HEIEGTVFDRSGKAVHRLFGKWHESIYCGGGSSSACVWRA
NPMPKGYEQYYSFTQFALELNEMDPSSKS
L
LPPTDTRFRPDQ
RFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSDDDSWVSNGTYLE
L
RKDLGFSKLDHPVLW




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser