NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5390.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5390.1 Public Homo sapiens 7 OSBPL3 24 110 108 CCDS HistoryNCBI Gene:26031Re-query CCDS DB by CCDS ID:5390.1Re-query CCDS DB by GeneID:26031See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5390.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313367.7 ENSP00000315410.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313367.7Link to Ensembl Protein Viewer:ENSP00000315410.2Re-query CCDS DB by Nucleotide ID:ENST00000313367Re-query CCDS DB by Protein ID:ENSP00000315410
Original member Current member NCBI NM_015550.4 NP_056365.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015550.4Link to Protein Sequence:NP_056365.1Re-query CCDS DB by Nucleotide ID:NM_015550Re-query CCDS DB by Protein ID:NP_056365Link to BLAST:NP_056365.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056365.1 887 Q9H4L5-1 887 100% 0 0

Chromosomal Locations for CCDS 5390.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24800183 24800279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24804315 24804437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24806776 24806902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24809807 24809951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24815059 24815203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24816610 24816688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24820175 24820238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24830768 24830905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24834486 24834736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24840690 24840783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24842279 24842413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24849069 24849176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24852504 24852634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24861613 24861769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24863200 24863292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24863496 24863599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24865342 24865465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24866070 24866237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24870732 24870845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24871742 24871795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24871953 24872069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24892377 24892472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2664 nt):
ATGATGAGTGATGAGAAGAACCTTGGTGTGTCCCAAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT
GCTCTTCCAAGCAAGGAAGTCGACAGGACAGCTGGGAAGTGGTGGAAGGACTGAGGGGGGAGATGAATTA
CACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCTGAAAAAGAGGAAGTGGCCCTTAAAAGGCTGGCAT
AAGAGATTCTTCTATCTGGACAAAGGAATCTTGAAATATGCCAAGAGCCAAACCGATATAGAGAGAGAGA
AGCTGCATGGCTGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAGAAGTCATCAAAATGCATAGACCT
TGACACCGAGGAGCACATCTACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGATGAGTGGGTATCGAAA
CTTCGCCACCACAGAATGTATCGTCAGAATGAAATTGCCATGTTTCCACATGAAGTTAACCACTTTTTCT
CAGGGTCCACCATCACAGACTCTTCATCTGGGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCAGTAT
ATCAAAGCAGAATTTATTTCAAACTGGAAGCAATGTATCATTTTCTTGTGGTGGTGAGACACGAGTTCCA
TTATGGTTACAGTCTTCAGAGGACATGGAAAAATGCTCCAAAGACCTGGCGCACTGTCATGCCTACCTGG
TAGAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGC
CATCCAGGGTGGATCTTTTGAAAGTCCCAAAAAGGAAAAAAGATCGCACAGGAGGTGGCGGTCCAGAGCT
ATTGGCAAAGATGCTAAAGGAACACTGCAGGTCCCGAAACCTTTTTCTGGCCCAGTAAGACTACACTCCT
CCAATCCTAATTTGTCAACACTAGATTTTGGAGAAGAGAAAAATTATTCTGATGGCTCTGAAACCTCATC
AGAGTTTTCTAAAATGCAAGAAGATCTGTGTCATATTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCT
TTTAATATCATGTCAGCGGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGATGCCTCCTCCTCCCCGT
CTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGCCCTAGCACAAAACACAGATCTTAAAGAACG
CTTACGCAGAATCCATGCCGAGTCTCTGCTCCTCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCTG
GCAGAGGAAAACTCCAGAGATGAAAACCGAGCTCTAGTTCATCAGCTTTCTAATGAAAGTAGACTCTCCA
TCACTGACTCCCTTTCTGAGTTTTTTGATGCTCAGGAAGTTCTGTTATCTCCAAGCTCTTCAGAAAACGA
GATTTCTGATGATGACTCATATGTCAGTGACATAAGTGATAATCTTTCCTTAGATAATCTCAGTAATGAT
TTAGATAATGAGAGACAGACCTTGGGGCCTGTCCTTGATAGTGGTCGGGAAGCGAAGTCCCGGAGAAGAA
CGTGCCTGCCGGCGCCCTGCCCGAGCAGCAGTAACATCAGCCTGTGGAACATCCTGAGGAACAACATCGG
GAAGGACCTGTCCAAGGTGGCCATGCCGGTGGAGCTGAACGAGCCCCTGAACACGCTGCAGAGGCTCTGC
GAGGAGCTGGAGTACAGCGAGCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGATGGTAT
ATGTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCC
GGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTTTTCAGAACAGGTCAGC
CACCATCCGCCTATCTCTGCGTGTCATGCTGAGTCTAGAAATTTTGTTTTCTGGCAAGATGTGAGATGGA
AAAACAAATTCTGGGGCAAATCCATGGAAATTGTTCCAATTGGCACAACCCATGTGACTCTGCCAGTTTT
TGGGGATCATTTTGAGTGGAACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATT
GAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGCTACTGCAAAGTGAATTTTATAA
AGGCAAAATACTGGAGCACTAATGCCCATGAGATTGAAGGCACAGTGTTTGACAGGAGTGGAAAAGCGGT
TCATCGGCTGTTTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCGGCTCCTCTTCTGCCTGTGTATGG
AGAGCAAATCCTATGCCGAAAGGCTACGAGCAATACTATAGCTTCACACAGTTTGCGCTGGAATTAAATG
AAATGGATCCATCATCAAAGTCTTTATTGCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCT
AGAGGAAGGGAACTTAGAAGAAGCTGAAATACAAAAGCAGAGGATTGAACAACTGCAGAGAGAAAGGCGG
CGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGG
TGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATG
GTGA

Translation (887 aa):
MMSDEKNLGVSQKLVSPSRSTSSCSSKQGSRQDSWEVVEGLRGEMNYTQEPPVQKGFLLKKRKWPLKGWH
KRFFYLDKGILKYAKSQTDIEREKLHGCIDVGLSVMSVKKSSKCIDLDTEEHIYHLKVKSEEVFDEWVSK
LRHHRMYRQNEIAMFPHEVNHFFSGSTITDSSSGVFDSISSRKRSSISKQNLFQTGSNVSFSCGGETRVP
LWLQSSEDMEKCSKDLAHCHAYLVEMSQLLQSMDVLHRTYSAPAINAIQGGSFESPKKEKRSHRRWRSRA
IGKDAKGTLQVPKPFSGPVRLHSSNPNLSTLDFGEEKNYSDGSETSSEFSKMQEDLCHIAHKVYFTLRSA
FNIMSAEREKLKQLMEQDASSSPSAQVIGLKNALSSALAQNTDLKERLRRIHAESLLLDSPAVAKSGDNL
AEENSRDENRALVHQLSNESRLSITDSLSEFFDAQEVLLSPSSSENEISDDDSYVSDISDNLSLDNLSND
LDNERQTLGPVLDSGREAKSRRRTCLPAPCPSSSNISLWNILRNNIGKDLSKVAMPVELNEPLNTLQRLC
EELEYSELLDKAAQIPSPLERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYECIREDKGFQFFSEQVS
HHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWI
EHYGEIVIKNLHDDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGGGSSSACVW
RANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERR
RVLEENHVEHQPRFFRKSDDDSWVSNGTYLELRKDLGFSKLDHPVLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH