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Report for CCDS5377.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5377.1 Public Homo sapiens 7 HYCC1 24 110 108 CCDS HistoryNCBI Gene:84668Re-query CCDS DB by CCDS ID:5377.1Re-query CCDS DB by GeneID:84668See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5377.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432176.7 ENSP00000403396.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000432176.7Link to Ensembl Protein Viewer:ENSP00000403396.2Re-query CCDS DB by Nucleotide ID:ENST00000432176Re-query CCDS DB by Protein ID:ENSP00000403396
Original member Current member NCBI NM_032581.4 NP_115970.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032581.4Link to Protein Sequence:NP_115970.2Re-query CCDS DB by Nucleotide ID:NM_032581Re-query CCDS DB by Protein ID:NP_115970Link to BLAST:NP_115970.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115970.2 521 Q9BYI3-1 521 100% 0 0

Chromosomal Locations for CCDS 5377.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 22945589 22946163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22960256 22960415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22961235 22961322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22964415 22964531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22976210 22976305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22976693 22976808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22977341 22977421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22978269 22978448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22983944 22984045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 22991061 22991111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGTTTACTTCAGAGAAAGGGGTTGTGGAGGAATGGTTGTCAGAGTTTAAGACATTACCAGAAACATCTT
TACCAAATTATGCCACAAATTTGAAAGACAAGAGTTCTTTAGTTTCATCTCTCTATAAAGTTATCCAGGA
GCCACAAAGTGAGTTGCTAGAACCTGTCTGTCACCAGCTCTTTGAATTCTATCGCAGTGGAGAGGAGCAG
TTGCTTCAATTTACGCTGCAATTTCTCCCAGAACTAATTTGGTGCTACCTTGCAGTCTCAGCCAGCAGAA
ATGTGCATAGCAGTGGATGCATTGAAGCTCTTCTTCTAGGGGTTTACAATTTGGAAATAGTTGACAAACA
GGGACATACCAAAGTATTGAGTTTTACGATTCCATCTTTATCCAAACCATCTGTATACCATGAACCTTCC
AGCATTGGGTCCATGGCTCTGACTGAGAGTGCACTATCCCAGCATGGTTTGTCAAAAGTGGTATACAGTG
GACCTCATCCTCAAAGGGAGATGCTGACAGCACAGAATCGGTTTGAAGTGTTGACATTCCTTTTGTTGTG
TTACAATGCTGCCTTAACTTACATGCCCAGTGTTTCTCTTCAGTCACTGTGTCAAATTTGTTCAAGAATC
TGTGTTTGTGGATATCCTCGACAACATGTAAGAAAATATAAAGGTATAAGTAGCAGGATACCAGTTTCTT
CAGGATTCATGGTGCAAATGTTAACAGGGATTTATTTTGCCTTTTATAATGGAGAATGGGATCTAGCTCA
AAAAGCACTGGATGATATTATATACAGAGCCCAGCTAGAATTATATCCAGAGCCATTGCTGGTTGCTAAT
GCAATAAAGGCTTCATTGCCTCATGGTCCCATGAAATCTAATAAGGAAGGTACAAGGTGTATTCAAGTTG
AAATCACACCAACTTCCTCTCGAATATCAAGAAATGCAGTAACCAGCATGTCAATAAGGGGTCATAGGTG
GAAAAGACATGGAAATACAGAATTAACAGGTCAAGAAGAACTGATGGAGATATCTGAAGTTGACGAGGGA
TTTTATTCCAGGGCTGCGTCTAGTACCAGCCAGTCGGGTTTATCAAACAGTAGTCACAATTGTAGTAACA
AGCCAAGTATAGGAAAGAACCACAGACGGTCAGGAGGAAGCAAAACTGGAGGAAAAGAAAAAGAAACTAC
AGGGGAATCTTGCAAAGATCACTTTGCTCGAAAACAAACTCAGAGAGCCCAAAGTGAGAATCTTGAGCTT
CTCTCTTTGAAGAGACTTACTTTAACAACCAGCCAATCCCTACCTAAGCCTAGTAGCCATGGTTTGGCTA
AGACCGCAGCGACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGTCACAGTCCCACATAACCCGTC
ATCTGCTGTTGGTTGTGGGGCTGGGACAGATGCCAATAGGTTTTCCGCTTGTAGTCTCCAAGAAGAAAAG
CTTATTTACGTTTCAGAAAGAACTGAACTTCCAATGAAGCATCAATCAGGTCAGCAGAGACCTCCTAGTA
TTAGCATTACTCTGTCCACAGATTAA

Translation (521 aa):
MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQ
LLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHTKVLSFTIPSLSKPSVYHEPS
SIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRI
CVCGYPRQHVRKYKGISSRIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVAN
AIKASLPHGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEG
FYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQSENLEL
LSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAVGCGAGTDANRFSACSLQEEK
LIYVSERTELPMKHQSGQQRPPSISITLSTD


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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