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Report for CCDS53658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53658.1 Public Homo sapiens 11 GPR137 24 110 108 CCDS HistoryNCBI Gene:56834Re-query CCDS DB by CCDS ID:53658.1Re-query CCDS DB by GeneID:56834See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 53658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377702.8 ENSP00000366931.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377702.8Link to Ensembl Protein Viewer:ENSP00000366931.4Re-query CCDS DB by Nucleotide ID:ENST00000377702Re-query CCDS DB by Protein ID:ENSP00000366931
Original member Current member NCBI NM_001170881.2 NP_001164352.1 Accepted alive Link to Nucleotide Sequence:NM_001170881.2Link to Protein Sequence:NP_001164352.1Re-query CCDS DB by Nucleotide ID:NM_001170881Re-query CCDS DB by Protein ID:NP_001164352Link to BLAST:NP_001164352.1
Original member Current member NCBI NM_001378076.1 NP_001365005.1 Accepted alive Link to Nucleotide Sequence:NM_001378076.1Link to Protein Sequence:NP_001365005.1Re-query CCDS DB by Nucleotide ID:NM_001378076Re-query CCDS DB by Protein ID:NP_001365005Link to BLAST:NP_001365005.1
Original member Current member NCBI NM_001378077.1 NP_001365006.1 Accepted alive Link to Nucleotide Sequence:NM_001378077.1Link to Protein Sequence:NP_001365006.1Re-query CCDS DB by Nucleotide ID:NM_001378077Re-query CCDS DB by Protein ID:NP_001365006Link to BLAST:NP_001365006.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164352.1 346 Q96N19-3 346 100% 0 0
NP_001365005.1 346 Q96N19-3 346 100% 0 0
NP_001365006.1 346 Q96N19-3 346 100% 0 0

Chromosomal Locations for CCDS 53658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64286525 64286881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64286965 64287014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64287721 64287946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64288340 64288468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64288603 64288721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64289037 64289196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGGAGAGTAACCTGTCTGGCCTGGTGCCTGCTGCCGGGCTGGTGCCTGCGCTGCCACCTGCTGTGACCC
TGGGGCTGACAGCTGCCTACACCACCCTGTATGCCCTGCTCTTCTTCTCCGTCTATGCCCAGCTCTGGCT
GGTGCTTCTGTATGGGCACAAGCGTCTCAGCTATCAGACGGTGTTCCTGGCCCTCTGTCTGCTCTGGGCC
GCCTTGCGTACCACCCTCTTCTCCTTCTACTTCCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCTTGC
CCTTCTGGCTTCTCTACTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGAACCTCTACTT
TGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGCGTCGGCCGGAGATGAGCCGAGGCTTGCTCGCTGTCCGA
GGGGCCTTTGTGGGGGCCTCGCTGCTCTTTCTGCTGGTGAACGTGCTGTGTGCTGTGCTCTCCCATCGGC
GCCGGGCACAGCCCTGGGCCCTGCTGCTTGTCCGCGTCCTGGTGAGCGACTCCCTGTTCGTCATCTGCGC
GCTGTCTCTTGCTGCCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCACTAGCATCTACCTGGAGGCC
AAGGCGGACCTGGTGAATGACCTGGGGAACAAAGGCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGG
AGCTACTGCCCACCACCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAG
CCACATCCTCAATGGGCAGGTCTTTGCCTCTCGGTCCTACTTCTTTGACCGGGCTGGGCACTGTGAAGAT
GAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGTCTAGGCTCTGGGAGCT
GGTATGGTGCCATCGGGCGTGAGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCCTCTGCTCTT
CTCCCAGGTGCCAGGACCAGGCGGCCACCACCACAGTCTCTACTCCACCCCACAGACGTGA

Translation (346 aa):
MESNLSGLVPAAGLVPALPPAVTLGLTAAYTTLYALLFFSVYAQLWLVLLYGHKRLSYQTVFLALCLLWA
ALRTTLFSFYFRDTPRANRLGPLPFWLLYCCPVCLQFFTLTLMNLYFAQVVFKAKVKRRPEMSRGLLAVR
GAFVGASLLFLLVNVLCAVLSHRRRAQPWALLLVRVLVSDSLFVICALSLAACLCLVARRAPSTSIYLEA
KADLVNDLGNKGYLVFGLILFVWELLPTTLLVGFFRVHRPPQDLSTSHILNGQVFASRSYFFDRAGHCED
EGCSWEHSRGESTSMSGSLGSGSWYGAIGREPGWYGGSQTKTTPLLFSQVPGPGGHHHSLYSTPQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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