CCDS Report for Consensus CDS

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Report for CCDS53262.2 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
53262.2	Public	Homo sapiens	1	MIB2	24	110	108

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 53262.2

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000518681.6	ENSP00000428264.2		Accepted	alive
		NCBI	NM_001170688.2	NP_001164159.2		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001164159.2	890	Q96AX9-4	890	100%	0	0

Chromosomal Locations for CCDS 53262.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)

Genome Browser links:

Chromosome	Start	Stop
1	1623453	1623699
1	1623774	1623945
1	1624795	1624901
1	1625286	1625428
1	1625546	1625653
1	1626650	1626754
1	1626837	1626999
1	1627074	1627207
1	1627296	1627444
1	1627673	1627829
1	1628019	1628179
1	1628273	1628399
1	1628489	1628722
1	1629133	1629311
1	1629385	1629566
1	1629639	1629704
1	1630292	1630530

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2673 nt):
ATGGACCCAGACCCCCAGGCGGGCGTGCAGGTGGGCATGCGGGTGGTGCGCGGCGTGGACTGGAAGTGGG GCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCGCCACGGCAGCCCCTCGAC ACCCGACCGCACAGTGGTCGTGCAGTGGGACCAGGGCACGCGCACCAACTACCGCGCCGGCTACCAGGGC GCGCACGACCTGCTGCTGTACGACAACGCCCAGATCGGCGTCCGGCACCCCAACATCATCTGTGACTGCT GCAAGAAGCACGGGCTGCGGGGGATGCGCTGGAAGTGCCGTGTGTGCCTGGACTACGACCTCTGCACGCA GTGCTACATGCACAACAAGCATGAGCTCGCCCACGCCTTCGACCGCTACGAGACCGCTCACTCGCGCCCT GTCACACTGAGTCCCCGCCAGGGCCTCCCGAGGATCCCACTAAGGGGCATCTTCCAGGGAGCGAAGGTGG TGCGAGGCCCCGACTGGGAGTGGGGCTCACAGGATGGCAAGCCGGCGGAGCTGCAGCGCAGGGTGAGTGC TGACAGCCAGCCCTTCCAGCACGGGGACAAGGTCAAGTGTCTGCTGGACACTGATGTCCTGCGGGAGATG CAGGAAGGCCACGGCGGCTGGAACCCCAGGATGGCGGAGTTTATCGGACAGACGGGCACCGTGCATCGTA TCACGGACCGCGGGGACGTGCGCGTGCAGTTCAACCACGAGACGCGCTGGACCTTCCACCCCGGGGCGCT CACCAAGCACCACTCCTTCTGGGTGGGCGACGTGGTCCGGGTCATCGGCGACCTTGACACAGTGAAGCGG CTGCAGGCTGGGCATGGCGAGTGGACGGACGACATGGCCCCTGCCCTGGGCCGCGTCGGGAAGGTGGTGA AAGTGTTTGGAGACGGGAACCTGCGTGTAGCAGTCGCTGGTCAGCGGTGGACCTTCAGCCCCTCCTGCCT GGTGGCCTACCGGCCCGAGGAGGATGCCAACCTGGACGTGGCCGAGCGCGCCCGGGAGAACAAAAGCTCA CTGAGCGTGGCCCTGGACAAGCTTCGGGCCCAGAAGAGTGACCCAGAGCACCCGGGAAGGCTGGTGGTGG AGGTGGCGCTGGGTAACGCAGCCCGGGCTCTGGACCTGCTGCGGAGGCGCCCAGAGCAGGTGGACACCAA GAACCAAGGCAGGACCGCTCTGCAAGTGGCTGCCTACCTGGGCCAGGTGGAGTTGATACGGCTGCTGCTA CAAGCCAGGGCGGGCGTGGACCTGCCGGACGACGAGGGCAACACGGCACTGCACTACGCGGCCCTGGGGA ACCAGCCCGAGGCCACCAGGGTGCTCCTGAGTGCTGGGTGCCGGGCGGACGCCATCAACAGCACCCAGAG CACAGCACTGCACGTGGCCGTGCAGAGGGGCTTCCTGGAGGTGGTGCGGGCCCTGTGTGAGCGCGGCTGT GACGTCAACCTGCCCGACGCCCACTCGGACACGCCCCTGCACTCCGCCATCTCGGCGGGCACTGGAGCCA GCGGCATTGTCGAGGTCCTCACGGAGGTGCCAAACATCGATGTTACCGCCACCAACAGCCAGGGTTTCAC CCTGCTGCACCATGCCTCCCTCAAGGGTCACGCGCTAGCTGTGAGAAAGATTCTGGCTCGGGCGCGGCAG CTGGTGGACGCCAAGAAGGAGGACGGCTTCACGGCGCTGCATCTGGCTGCCCTCAACAACCACCGCGAGG TGGCCCAGATCCTCATCCGGGAGGGCCGCTGTGACGTGAACGTGCGCAACCGGAAGCTGCAGTCCCCGCT GCATCTCGCCGTGCAACAGGCCCACGTGGGGCTGGTGCCGCTACTGGTGGACGCTGGGTGCAGTGTCAAC GCCGAGGACGAGGAGGGGGACACAGCCCTGCACGTGGCGCTGCAGCGTCATCAGCTGCTGCCCCTGGTGG CTGATGGGGCCGGGGGGGACCCAGGGCCCTTGCAGCTGCTGTCCAGGCTACAGGCCTCGGGCCTCCCCGG CAGCGCGGAGCTGACGGTGGGCGCGGCGGTCGCCTGCTTCCTGGCGCTGGAGGGCGCCGACGTGAGCTAC ACCAACCACCGCGGTCGGAGCCCGCTGGACCTGGCCGCCGAGGGTCGCGTGCTCAAGGCCCTTCAGGGCT GCGCCCAGCGCTTCCGGGAGCGGCAGGCGGGCGGGGGCGCGGCCCCGGGCCCCAGGCAAACGCTCGGGAC CCCCAACACCGTGACGAACCTGCACGTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGTGTGC TCCGAGCTGGCGCTGCTGGTGCTGTTCTCGCCGTGCCAGCACCGCACCGTGTGTGAGGAGTGCGCGCGCA GGATGAAGAAGTGCATCAGGTGCCAGGTGGTCGTCAGCAAGAAACTGCGCCCAGACGGCTCTGAGGTGGC GAGCGCCGCCCCCGCCCCCGGCCCGCCGCGCCAGCTGGTGGAGGAGCTGCAGAGCCGCTACCGGCAGATG GAGGAACGCATCACCTGCCCCATCTGCATCGACAGCCACATCCGCCTCGTGTTCCAGTGCGGCCACGGCG CATGCGCCCCCTGCGGCTCCGCGCTCAGCGCCTGCCCCATCTGCCGCCAGCCCATCCGCGACCGCATCCA GATCTTCGTGTGA
Translation (890 aa):
MDPDPQAGVQVGMRVVRGVDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNYRAGYQG AHDLLLYDNAQIGVRHPNIICDCCKKHGLRGMRWKCRVCLDYDLCTQCYMHNKHELAHAFDRYETAHSRP VTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGKPAELQRRVSADSQPFQHGDKVKCLLDTDVLREM QEGHGGWNPRMAEFIGQTGTVHRITDRGDVRVQFNHETRWTFHPGALTKHHSFWVGDVVRVIGDLDTVKR LQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVAGQRWTFSPSCLVAYRPEEDANLDVAERARENKSS LSVALDKLRAQKSDPEHPGRLVVEVALGNAARALDLLRRRPEQVDTKNQGRTALQVAAYLGQVELIRLLL QARAGVDLPDDEGNTALHYAALGNQPEATRVLLSAGCRADAINSTQSTALHVAVQRGFLEVVRALCERGC DVNLPDAHSDTPLHSAISAGTGASGIVEVLTEVPNIDVTATNSQGFTLLHHASLKGHALAVRKILARARQ LVDAKKEDGFTALHLAALNNHREVAQILIREGRCDVNVRNRKLQSPLHLAVQQAHVGLVPLLVDAGCSVN AEDEEGDTALHVALQRHQLLPLVADGAGGDPGPLQLLSRLQASGLPGSAELTVGAAVACFLALEGADVSY TNHRGRSPLDLAAEGRVLKALQGCAQRFRERQAGGGAAPGPRQTLGTPNTVTNLHVGAAPGPEAAECLVC SELALLVLFSPCQHRTVCEECARRMKKCIRCQVVVSKKLRPDGSEVASAAPAPGPPRQLVEELQSRYRQM EERITCPICIDSHIRLVFQCGHGACAPCGSALSACPICRQPIRDRIQIFV

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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