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Report for CCDS5244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5244.1 Public Homo sapiens 6 RGS17 24 110 108 CCDS HistoryNCBI Gene:26575Re-query CCDS DB by CCDS ID:5244.1Re-query CCDS DB by GeneID:26575See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5244.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000206262.2 ENSP00000206262.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000206262.2Link to Ensembl Protein Viewer:ENSP00000206262.1Re-query CCDS DB by Nucleotide ID:ENST00000206262Re-query CCDS DB by Protein ID:ENSP00000206262
Original member Current member EBI ENST00000367225.6 ENSP00000356194.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367225.6Link to Ensembl Protein Viewer:ENSP00000356194.1Re-query CCDS DB by Nucleotide ID:ENST00000367225Re-query CCDS DB by Protein ID:ENSP00000356194
Original member Current member NCBI NM_012419.5 NP_036551.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012419.5Link to Protein Sequence:NP_036551.3Re-query CCDS DB by Nucleotide ID:NM_012419Re-query CCDS DB by Protein ID:NP_036551Link to BLAST:NP_036551.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036551.3 210 Q9UGC6 210 100% 0 0

Chromosomal Locations for CCDS 5244.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 153011574 153011762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 153024262 153024496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 153026454 153026543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 153043900 153044018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGCGAAAAAGGCAGCAGTCCCAAAATGAAGGAACACCTGCCGTGTCTCAAGCTCCTGGAAACCAGAGGC
CCAACAACACCTGTTGCTTTTGTTGGTGCTGTTGTTGCAGCTGCTCCTGCCTCACTGTGAGGAATGAAGA
AAGAGGGGAAAATGCGGGAAGACCCACACACACTACAAAAATGGAGAGTATCCAGGTCCTAGAGGAATGC
CAAAACCCCACTGCAGAGGAAGTCTTGTCCTGGTCTCAAAATTTTGACAAGATGATGAAGGCCCCAGCAG
GAAGAAACCTTTTCAGAGAGTTCCTCCGAACAGAATACAGTGAAGAGAACCTACTTTTCTGGCTTGCTTG
TGAAGACTTAAAGAAGGAGCAGAACAAAAAAGTAATTGAAGAAAAGGCTAGGATGATATATGAAGATTAC
ATTTCTATACTATCACCAAAAGAGGTCAGTCTTGATTCTCGAGTTAGAGAGGTGATCAATAGAAATCTGT
TGGATCCCAATCCTCACATGTATGAAGATGCCCAACTTCAGATATATACTTTAATGCACAGAGATTCTTT
TCCAAGGTTTTTGAACTCTCAAATTTATAAGTCATTTGTTGAAAGTACTGCTGGCTCTTCTTCTGAATCT
TAA

Translation (210 aa):
MRKRQQSQNEGTPAVSQAPGNQRPNNTCCFCWCCCCSCSCLTVRNEERGENAGRPTHTTKMESIQVLEEC
QNPTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDY
ISILSPKEVSLDSRVREVINRNLLDPNPHMYEDAQLQIYTLMHRDSFPRFLNSQIYKSFVESTAGSSSES


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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