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Report for CCDS517.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
517.1 Public Homo sapiens 1 EIF2B3 24 110 108 CCDS HistoryNCBI Gene:8891Re-query CCDS DB by CCDS ID:517.1Re-query CCDS DB by GeneID:8891See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 517.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360403.7 ENSP00000353575.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360403.7Link to Ensembl Protein Viewer:ENSP00000353575.2Re-query CCDS DB by Nucleotide ID:ENST00000360403Re-query CCDS DB by Protein ID:ENSP00000353575
Original member Current member NCBI NM_020365.5 NP_065098.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020365.5Link to Protein Sequence:NP_065098.1Re-query CCDS DB by Nucleotide ID:NM_020365Re-query CCDS DB by Protein ID:NP_065098Link to BLAST:NP_065098.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065098.1 452 Q9NR50-1 452 100% 0 0

Chromosomal Locations for CCDS 517.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 44850951 44851003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44857704 44857807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44874678 44874826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44875618 44875695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44879818 44880008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44881612 44881739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44897355 44897444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44926628 44926739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44941506 44941665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44978315 44978460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44981021 44981168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGGAATTTCAAGCAGTAGTGATGGCAGTAGGTGGAGGATCTCGGATGACAGACCTAACTTCCAGCATTC
CCAAACCTCTGCTTCCAGTTGGGAACAAACCTTTAATTTGGTACCCATTGAACCTGCTTGAGCGTGTTGG
ATTTGAAGAAGTCATTGTGGTTACAACCAGGGATGTTCAAAAGGCTCTATGTGCAGAATTCAAGATGAAA
ATGAAGCCAGATATTGTGTGTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATAT
ATCCAAAACTTAAGACAGATGTGCTGGTGCTGAGCTGTGATCTGATAACAGACGTTGCCTTACATGAGGT
TGTGGACCTGTTTAGAGCTTATGATGCATCACTTGCTATGTTGATGAGAAAAGGCCAAGATAGCATAGAA
CCTGTTCCCGGTCAAAAGGGGAAAAAAAAAGCAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCACAG
GAAAGAGGCTGCTCTTCATGGCTAATGAAGCAGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCT
ACAGAAGCATCCTAGAATACGTTTCCACACGGGTCTTGTGGATGCCCACCTCTACTGTTTGAAAAAATAC
ATCGTGGATTTCCTAATGGAAAATGGGTCAATAACTTCTATCCGGAGTGAACTGATTCCATATTTAGTGA
GAAAACAGTTTTCCTCAGCTTCCTCACAACAGGGACAAGAAGAAAAAGAGGAGGATCTAAAGAAAAAGGA
GCTGAAGTCCTTAGATATCTACAGTTTTATAAAAGAAGCCAATACACTGAACCTGGCTCCCTATGATGCC
TGCTGGAATGCCTGTCGAGGAGACAGGTGGGAAGACTTGTCCAGATCACAGGTGCGCTGCTATGTCCACA
TCATGAAAGAGGGGCTCTGCTCTCGAGTGAGCACACTGGGACTCTACATGGAAGCAAACAGACAGGTGCC
CAAATTGCTGTCTGCTCTCTGTCCAGAAGAACCACCAGTCCATTCGTCAGCCCAGATTGTCAGCAAACAC
CTGGTTGGAGTTGACAGCCTCATTGGGCCAGAGACACAGATTGGAGAGAAGTCATCCATTAAGCGCTCAG
TCATTGGCTCATCCTGTCTCATAAAAGATAGAGTGACTATTACCAATTGCCTTCTCATGAACTCAGTCAC
TGTGGAGGAAGGAAGCAATATCCAAGGCAGTGTCATCTGCAACAATGCTGTGATCGAGAAGGGTGCAGAC
ATCAAGGACTGCTTGATTGGAAGTGGCCAGAGGATTGAAGCCAAAGCTAAACGAGTGAATGAGGTGATCG
TGGGGAATGACCAGCTCATGGAGATCTGA

Translation (452 aa):
MEFQAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQKALCAEFKMK
MKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEVVDLFRAYDASLAMLMRKGQDSIE
PVPGQKGKKKAVEQRDFIGVDSTGKRLLFMANEADLDEELVIKGSILQKHPRIRFHTGLVDAHLYCLKKY
IVDFLMENGSITSIRSELIPYLVRKQFSSASSQQGQEEKEEDLKKKELKSLDIYSFIKEANTLNLAPYDA
CWNACRGDRWEDLSRSQVRCYVHIMKEGLCSRVSTLGLYMEANRQVPKLLSALCPEEPPVHSSAQIVSKH
LVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGAD
IKDCLIGSGQRIEAKAKRVNEVIVGNDQLMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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