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Report for CCDS51508.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51508.1 Public Mus musculus 5 Nwd2 23 108 98 CCDS HistoryNCBI Gene:319807Re-query CCDS DB by CCDS ID:51508.1Re-query CCDS DB by GeneID:319807See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51508.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000159584.2 ENSMUSP00000124712.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000159584.2Link to Ensembl Protein Viewer:ENSMUSP00000124712.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000159584Re-query CCDS DB by Protein ID:ENSMUSP00000124712
Original member Current member NCBI NM_177006.3 NP_795980.2 Accepted alive Link to Nucleotide Sequence:NM_177006.3Link to Protein Sequence:NP_795980.2Re-query CCDS DB by Nucleotide ID:NM_177006Re-query CCDS DB by Protein ID:NP_795980Link to BLAST:NP_795980.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795980.2 1742 Q6P5U7 1742 100% 0 0

Chromosomal Locations for CCDS 51508.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 63650170 63650320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 63725158 63725246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 63745181 63745297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 63791444 63791647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 63794189 63794333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 63800035 63800624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 63804371 63808303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5229 nt):
ATGTGGCCGGCCGGTGCGGGCACCAAGCTGCCCTGTCCCCGGGACTCCGCGCTCCGGCGGGCGGCGTTCT
CTGGTAATCTCACCGCCCTTCCTTCTCACCTGGTACCCGCCGGTCGCAGCGTCCGGGTCTTCATCAGCGC
CAACCCTGAAGATACAGGAGCGGAACGGCAGGCACTAAGAGAAACTGTGTATCCGAAACTGAGAGAATTC
TGCAGAGAAAACTATGGGTTGGAATTTCAGGTCATAGATCTGTACTGGGGAATTGAGGAAGATGAATGGG
ACAGCCCCGAACTGCAGAAGATGCGCATGAAGCTGCTGGAGGAATGCTTGAAAACTTCTGCAGGTCCATG
CTTTGTTGGCCTCTTAGGTGAAAAATATGGGAACATTCGAATCCCTGGGGAAGTAGAAGCTTCAGAGTTT
GAAATGATTTTGGATGCTGCTGTCGAGGCAAAATTAGAGACCAAGTTACTGGAAGATTGGTACTGTCGGG
ATGAGAACTCTGTGCCAGCAGCCTATTACCTCAGACCCAGGCTGGAGGTGCCAAGAAGCAACAAAAACTC
AACACAGCCTTCTGCCAGTAGTGAACAGGAGAGGCCATGGCAAGAAATATCGGATGAAATCAAAACGATA
TTTAAAGCTGCTGTCAAACTGCTGCATGAACAGGGGAAAATGAAGCAAAGTCAGGCTAAGAGGTACCTGT
TCTCAGCTATCGAGGATGAGTTTGACTTTGCTCTAGGCAAGCAAACTCCAGCCTTCCTGAAGAAGTGTGT
TTGCTACATCAGAAAGATTGCTAACATCGAACGCTTCGTGAAAATCCCAGAGATGGGGAAATACATGGAC
ATAACCGGAACAGACCCAAGAATCGTCCGTGACCCAGAAGCTCAAGAGAAGCTGATAAAACTCAGGGATG
AATTCATTCCTACCATTGTTGCATCCTCTAATTTGAGAGTGTACACATCTGTCACTCACTGTGACATGAA
ACTGGGCTATTCCCAAGAGATAGAAAACCATTACATAGAAGGACTTGGTAAGCAATTTTATGAAGACATG
ATTGATATAATTCAGGCAACAGTACAGCAGAACTTTGACACGGAGACTGATACGCTGTACGATGAAATCC
TGCAGCACTCCTCACTGTGTAAAACATATGCCTCCTTCTATGAATACAAATGTGAATCACTAAACATCTT
GCATAAATACATCCTTCCAAGCAAAACCGGGCATATCAACCCTCTCGTTGTGTATGGGGGACCATGCACT
GGGAAGACTCTACTGCTAGCTGAAGTAGCAAAAAAGGCTTATGGCTGGCTACATGAAGACACAGGGCCAG
ACTCTGACCCAGTTGTCATTGTGAGATTTCTAGGAACAACAGACATGAGTATTGATCTGAGGACACTTCT
TCTAAGTGTCTGTGAACAGCTGGCCGTCAACTACCGGTGTCTGGTTCAAAGCTTTCCTAAGAAGATCCAC
GACCTTCGTGACTTGTTTATAAACCTGTTGAATGAGTCTTCACTGCAGAGACCTCTGGTAATCATATTGG
ATGCCCTAGAGCAGCTCTCGGAGGCCGACGAAGCTAGGAAGCTCTGGTGGCTGCCCGCTCATCTTCCCCG
GTTTGTGCGGATCATCCTCTCCACACTGCCTAACAAACATGGGATCCTGCAGAAACTCCGGTGCCTTATC
CATGAAGAAGACAACTACATTGAGCTGATTCCCCGGGACAGAAAGATGTGCAGTCAGGTCCTCAAACATC
AGCTGCTGAGGGTCAAAAGGAAGGTCACGTCCGGCCAGCAGATTTATGTAAATAATGCATTCTCCAAGTG
CACACTGCCTATGTTTGTGAACCTAACTTTCAGAGAGGTGAGACACTGGAGATCTCACAAGGATGTCGAT
GAGTCCTCCCTCTGTGTGACTGTCCACGAAAGCATAGAGCAGTTATTCTGGTCCTTGGAGAAGAAGTGTG
GTCAGAAACTGGTCTCCAGGGCTCTGGGTTACATCACCATGGCCAAAATGGGTTTGAGTGAAATGGAACT
GGAAGATGTATTAGCTCTGGACAACAGCGTTATGAATGAACTCAATGAGAACACCAGACCCAGCAATCCC
CTGAGAGTACCTTACCTGTATATTGCAAGGCTCAAGGAGGGTCTCAATGGGTACTTAATAGAAAGACATG
TGAAGAATGTCACACTCTTAGTCTGGGCCAACAGACACCTGCAGCTCATAGCTCAGAAGCTGTACCTGCA
AGAAGACAGCAACCTTCGAGAGATGCACACAATCCTGGCAGATTACTTTCTAGGGGTGTGGTCGGGAGGC
AGGAGGAAAGCTTTCTGCCTGGAAGACCCCTACTTGAATGGCTGCCTCGACTTAGAGAACAGAAGTCTGC
TTGAGGAAGAAAAGCACTTCATGGAACAAGCATCCTTCGACAGGCAGGCCCCCGACCAGCCCTGGGTTTT
CCAGTGTAACCCACTAGAGCCCGACATCTTTTTTGTCAATCACCGGAAGATGTCTGAGCTCTTGTATCAT
CTGACCAGGTGTGGGAAAACCGATGACCTCCTTTATGGAATCATCATGAACTTCAGCTGGCTTTACACCA
TGATCAAAATTGGCCAGTTTGACAAAGTGCTTGCCGACATAGAACTGGCTTACAACTACTCGCAGGAAAA
GGAGCTGAAGTTCCTGGCCAGCACACTCCGTAGCATCAGAAACAAGGTCATTGCATTCCCAGGTTCCCTT
TCAGCAGAGCTGCAGCAAAGGCTGCTGCCTGTTGTGAGTTCCCTGCCCAAACTCAGACACCTCCTTTTAG
AATGTGACAAAGACGGACCCAAATACTGCTCCATCGTTCCTCTCCATTCATCCATGGATGTGACATACAG
CCCCGAGCGCCTCCCCTTAGCATCCAGCCACCTGCACGTCACAGAGATCCTCCCCACCTGTAACCCCAGC
ACTGTTCTCACAGCTCTGGAAAATGGTTCCATCAGCACCTGGGATGTAGAAACTCGCCAGCTCCTCCGGC
AAATCACTACAGCCCAGTCCGTTATCCTGGGCATGAAGCTGAGCAGTGATGAGAAGTACCTTGTGGTTGC
TACGACAAACAACACCTTGCTGATTTACGACAATGTCAATTCCTGTCTCCTGTCTGAGGTGGAAATCAAA
GGGACCAAGCATGGAAGCGGCTCCACCTACATCAATGGATTTACACTCTCGGTCAATCATGCCCTTGCGT
GGCTAGAGGCCAGCAAAGATGTCACTGTCATTGACCTGCTCTATGGATGGCCCCTTTACCAGTTCCACTG
CTGGTATGAGGTGACATGTGTCCAGTGCTCCCTGGATGGGGTATATGCTTTCTGTGGCCAATACCTCAAT
AACACCACCATTTTCCACTTAGGGAGTGGAGAAAAAATATGTACCGTGACGTCAGAATTTTCAGGTGGCT
TTGTGAAGTTTCTTCTCATCTTGGACACAGCTCAAGAGATGGTCATGGTAGACAGTGAGGGAAGTCTCTC
GGTTTGGAACACCGAGGACATATCCAACCCCCAGCTGACTGAAGACTTTGACTGTCGGAAGGAAGACAGC
GAAGTGGTGAGCATTGAGCTTTCGGAAGACCAAAGTGCGATTCTGATCTGTAAAGCTCTCAGCATTGAGC
TCTTAGACACCGGCATGTGGAAGGTAGCTGAAAAATTCCGAGCCAGGCACAACGAACGCTTTGTATCTGC
CGTGCTATCCAAAAACGGGGACTGTATCATCGCAACCATGGAGAATACCCCAGCGGTATTCTTCTGGAGG
CGGGACACAGGACAGTGCCTGGCGAGCTTGCAGGAAAGCTCGGGTACCATCGTTAAGTTGGTAAAATCCA
GTCACCACAATATGCTACTGTCTTTGTCAACCAGTGGCGTTCTTTCCATTTGGGATATAGACATAATCAC
AGCTATGTCCAATATCGATAAAACTGGAAAACCCATTCAGAGTCTGGTGTTGCCGGCCAGGGGGGAGATC
ATCTACTCTCTCGATGGCTCCGATTGTGTACATAAATGGAACTTCAGCAGTGGGTTCATTGAAGCAGTAT
TTAAGCATGAAGGGATAGTCGAACACTGTGTGTTAACGTCCACTGGGGACCTAATGGTGACGTCAGATGA
CAAAAGCAGCCAGTACGTCTGGCATACCAGCAGTGGGGAAAACCTCTTCCGAATTAACGGGCAGAGGATC
TCTCAGCTGCTGATCACCCACAACGACCAGTTTGTGGTCTCTCTCTGTGAGGAGAACGCCTCCAGGGTTT
GGAGGCTGGCCACAGGCCACAGAGTCTGCAACATCTTGACCACTTTGCAAAATGCCTTCATTACCTCTGC
AAACACCTTCGTGGTGGGAATGACGAAAAGCAAAGTGCTGGCAGTCAGTCTCTGGACCGGAAGTATCACC
AAGAAATTCTGCTGTGAGGATGGGATCACCATTGTGAATTTCAAGTTGATCCCCGACTGTCCTGACGTCA
TCGTGTTTATCACGTCAGCCGAGACCGTGAACCTCTGGAGCCTGACTGATGAAGTGATTTGTCGGCGTGT
GCAGCTTCCAAGCAACTTCTTGAAAAACCTGGAGGATTTTGAAATTTCTCCCAATGGGAAGCTCGGCATT
ATATCCCGTGGAGATGAAAATATCAATGTGCTGGATTTACACAGTGGAAAGCTACGGGTGGTTCACGCCT
CTGGAGTCATCTGGAGGCAGAGGCTCTCTCGAGATGGTCGCTACCTGGTGTATATTTGTTTCCGGAATGG
GGAGGAGGAGGAGGAAAACGATGCTATTTCTAGTTTAATAGTGATGAGACTGGCTGACGGCAAAAACATC
GGTGCTTGCTCCCTATACAAAACACCAACTTTCCTTGCACTTTCTCAGAGACACCTGAACATCATCGTCG
GCTTTGATGATGGGAGTATAGGGATATACACAGTTGTGGATCGTGTAGATGCTGCGTTGAAGATCAAAAT
TGCCACATCGAATAGCAGACAGATTTTCAACAATGCAACGCAGACATCCAGGCCAAAGTCAAACAGCTAC
TCCTTTAAAGTGTCTGTGGATTGCTTATGGCGAGAGTCCACTGAGGTCTTTGCAAGAGACAGCCCCATCA
CCGTGAGTGACTCTTCTGAGTCCAACGAGGCAACACCCTCCAAGAAACACAATTCTTGTTATGACCGAGT
GTGTGCTGCCCTAGAATCCAGGAGCCACAGCTACACTCCAGATAACTGA

Translation (1742 aa):
MWPAGAGTKLPCPRDSALRRAAFSGNLTALPSHLVPAGRSVRVFISANPEDTGAERQALRETVYPKLREF
CRENYGLEFQVIDLYWGIEEDEWDSPELQKMRMKLLEECLKTSAGPCFVGLLGEKYGNIRIPGEVEASEF
EMILDAAVEAKLETKLLEDWYCRDENSVPAAYYLRPRLEVPRSNKNSTQPSASSEQERPWQEISDEIKTI
FKAAVKLLHEQGKMKQSQAKRYLFSAIEDEFDFALGKQTPAFLKKCVCYIRKIANIERFVKIPEMGKYMD
ITGTDPRIVRDPEAQEKLIKLRDEFIPTIVASSNLRVYTSVTHCDMKLGYSQEIENHYIEGLGKQFYEDM
IDIIQATVQQNFDTETDTLYDEILQHSSLCKTYASFYEYKCESLNILHKYILPSKTGHINPLVVYGGPCT
GKTLLLAEVAKKAYGWLHEDTGPDSDPVVIVRFLGTTDMSIDLRTLLLSVCEQLAVNYRCLVQSFPKKIH
DLRDLFINLLNESSLQRPLVIILDALEQLSEADEARKLWWLPAHLPRFVRIILSTLPNKHGILQKLRCLI
HEEDNYIELIPRDRKMCSQVLKHQLLRVKRKVTSGQQIYVNNAFSKCTLPMFVNLTFREVRHWRSHKDVD
ESSLCVTVHESIEQLFWSLEKKCGQKLVSRALGYITMAKMGLSEMELEDVLALDNSVMNELNENTRPSNP
LRVPYLYIARLKEGLNGYLIERHVKNVTLLVWANRHLQLIAQKLYLQEDSNLREMHTILADYFLGVWSGG
RRKAFCLEDPYLNGCLDLENRSLLEEEKHFMEQASFDRQAPDQPWVFQCNPLEPDIFFVNHRKMSELLYH
LTRCGKTDDLLYGIIMNFSWLYTMIKIGQFDKVLADIELAYNYSQEKELKFLASTLRSIRNKVIAFPGSL
SAELQQRLLPVVSSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPERLPLASSHLHVTEILPTCNPS
TVLTALENGSISTWDVETRQLLRQITTAQSVILGMKLSSDEKYLVVATTNNTLLIYDNVNSCLLSEVEIK
GTKHGSGSTYINGFTLSVNHALAWLEASKDVTVIDLLYGWPLYQFHCWYEVTCVQCSLDGVYAFCGQYLN
NTTIFHLGSGEKICTVTSEFSGGFVKFLLILDTAQEMVMVDSEGSLSVWNTEDISNPQLTEDFDCRKEDS
EVVSIELSEDQSAILICKALSIELLDTGMWKVAEKFRARHNERFVSAVLSKNGDCIIATMENTPAVFFWR
RDTGQCLASLQESSGTIVKLVKSSHHNMLLSLSTSGVLSIWDIDIITAMSNIDKTGKPIQSLVLPARGEI
IYSLDGSDCVHKWNFSSGFIEAVFKHEGIVEHCVLTSTGDLMVTSDDKSSQYVWHTSSGENLFRINGQRI
SQLLITHNDQFVVSLCEENASRVWRLATGHRVCNILTTLQNAFITSANTFVVGMTKSKVLAVSLWTGSIT
KKFCCEDGITIVNFKLIPDCPDVIVFITSAETVNLWSLTDEVICRRVQLPSNFLKNLEDFEISPNGKLGI
ISRGDENINVLDLHSGKLRVVHASGVIWRQRLSRDGRYLVYICFRNGEEEEENDAISSLIVMRLADGKNI
GACSLYKTPTFLALSQRHLNIIVGFDDGSIGIYTVVDRVDAALKIKIATSNSRQIFNNATQTSRPKSNSY
SFKVSVDCLWRESTEVFARDSPITVSDSSESNEATPSKKHNSCYDRVCAALESRSHSYTPDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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