CCDS Report for Consensus CDS

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Report for CCDS51202.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
51202.1	Public	Mus musculus	4	Rgs3	23	108	98

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51202.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENSMUST00000084521.10	ENSMUSP00000081569.4	Accepted	alive
NCBI	NM_134257.3	NP_599018.3	Updated	not alive
NCBI	NM_134257.4	NP_599018.3	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_599018.3	966	Q9DC04-3	966	100%	0	0

Chromosomal Locations for CCDS 51202.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)

Genome Browser links:

Chromosome	Start	Stop
4	62619734	62619787
4	62623845	62623926
4	62625097	62625202
4	62625742	62626093
4	62626492	62626531
4	62631124	62631320
4	62634446	62634529
4	62640717	62640828
4	62646684	62646727
4	62652714	62652836
4	62689499	62690626
4	62697271	62697332
4	62699998	62700099
4	62700354	62700415
4	62701034	62701200
4	62702060	62702245

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2901 nt):
ATGAACCGCTTCAATGGGCTCTGCAAAGTGTGTTCAGAACGCCGCTACCGGCAGATCACCATCCGGAGGG GCAAAGACGGCTTTGGCTTCACCATCTGCTGTGACTCTCCGGTCCGAGTCCAGGCTGTGGATTCTGGGGG CCCGGCAGAGAGGGCGGGACTGCAGCAGCTGGACACAGTGCTACAACTGAATGAGAGACCCGTGGAGCAC TGGAAATGTGTGGAGCTGGCACATGAGATCCGGAGCTGTCCTAGCGAGATCATCCTGCTCGTGTGGCGTG TGGTCCCCCAGATCAAGCCGGGGCCAGATGGCGGAGTCTTGCGGCGGGCCTCCTGCAAGTCCACACATGA CCTCCTGTCACCCCCTAACAAGAGGGAGAAGAACTGTACTCATGGGGCCCCAGTTCGTCCTGAGCAGCGC CACAGCTGCCACCTGGTGTGTGACAGCTCTGATGGTCTACTGCTTGGTGGCTGGGAGCGCTACACTGAGG TGGGCAAGCGCAGTGGCCAGCACACCCTGCCTGCACTGTCCCGGACCACCACCCCTACTGACCCCAACTA CATCATCCTGGCCCCACTGAATCCTGGAAGCCAGTTGCTGCGGCCTGTGTACCAGGAGGATACAATCCCT GAAGAACCGGGGACTACTACTAAAGGGAAATCGTACACCGGCCTGGGCAAGAAGTCTCGGCTCATGAAGA CAGTGCAGACCATGAAGGGCCACAGTAACTACCAAGACTGCTCAGCCCTGAGACCGCACATCCCGCATTC CAGTTACGGCACCTATGTCACCCTGGCCCCTAAAGTCCTGGTGTTCCCTGTCTTTGTGCAGCCCCTAGAT CTCTGTAACCCTGCCCGGACTCTCCTGCTGTCGGAGGAGCTGCTGCTGTATGAGGGGAGGAACAAGACTT CCCAGGTGACACTGTTTGCCTACTCGGACCTGCTGCTGTTCACTAAGGAGGAGGAGCCAGGCCGCTGCGA CGTCCTGAGAAATCCCCTCTACCTCCAGAGCGTGAAGCTACAGGAGGGCTCTTCAGAAGACTTGAAATTC TGTGTGCTGTACCTGGCAGAGAAGGCAGAGTGCTTATTCACTTTGGAGGCACACTCGCAGGAGCAGAAGA AGAGAGTGTGCTGGTGCCTGTCGGAGAACATCGCCAAGCAGCAACAGCTGGCCGCACCACCTACAGAGAG GAAGATGTTTGAGACAGAGGCAGATGAGAAGGAGATGCCCCTGGTCGAGGGGAAGGGGCCAGGTGCTGAG GAACCCGCACCCAGCAAAAATCCCTCTCCTGGCCAGGAGCTTCCTCCAGGACAAGACCTCCCTCCCAGCA AAGACCCCTCTCCCAGCCAGGAGCTTCCTGCAGGACAAGATCTCCCTCCCAGCAAAGACCCCTCTCCCAG CCAGGAGCTTCCTGCAGGACAAGATCTCCCTCCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTTCCTGTA GGACAAGACCTCCCACCCAGGAAGGACTCCTCAGGCCAAGAAGCTGCTCCTGGCCCAGAATCACCATCCA GTGAAGACATAGCAACCTGCCCTAAGCCCCCTCAAAGCCCAGAAACCTCAACAAGCAAGGACTCCCCACC AGGCCAGGGATCCTCCCCGACCACAGAACTCCCATCTTGCCAGGGCCTTCCTGCTGGTCAAGAATCTACT AGCCAGGACCCTCTGCTCAGTCAAGAGCCCCCTGTTATCCCAGAATCCTCTGCCTCCGTCCAGAAACGCC TACCCTCTCAGGAGTCACCCTCCAGCCTGGGCTCCCTGCCAGAGAAGGACCTTGCTGAGCAGACCATCAG CTCCGGGGAGCCACCAGTCGCCACTGGTGCTGTACTGCCAGCCTCTAGACCTAACTTTGTGATCCCCGAG GTGCGTCTGGATAATGCCTACAGCCAACTGGATGGGGCCCACGGAGGCAGCTCTGGCGAGGACGAGGATG CAGAAGAGGGAGAGGAGGGGGGAGAAGGGGAGGAAGATGAGGAGGACGACACCAGCGACGACAACTACGG GGATCGTAGTGAGGCCAAGCGCAGCAGCCTGATTGAGACTGGCCAAGGCGCCGAGGGCGGCTTCTCGTTG CGTGTGCAGAACTCGCTGCGGCGCCGGACGCACAGCGAGGGCAGCCTGCTGCAGGAGTCCCGGGGGCCCT GCTTTGCCTCTGACACCACCTTACACTGCTCTGATGGCGAGGGCGCCACATCCACCTGGGCTATCCCTTC ACCCCGCACCCTCAAAAAAGAACTGGGTCGTAATGGAGGCTCCATGCACCACCTTTCCCTGTTCTTCACG GGACACAGGAAGATGAGTGGGACTGACCTCACAGAATGTGATGAAGCTTCCCGGAAGAGAAAGAGCAAAA ACATAGCCAAGGACATGAAGAATAAGCTGGCCATCTTCAGGCGGCGGAACGAATCTCCCGGGGCTCAGCC AGCCAGCAAGACAGACAAGACAACCAAGTCCTTCAAGCCTACCTCGGAGGAAGCCCTCAAGTGGAGCGAG TCCCTGGAAAAGTTGCTGCTTCATAAATATGGCTTAGAAGTGTTCCAGGCCTTCCTTCGCACCGAGTTCA GTGAGGAGAACCTGGAGTTTTGGCTCGCTTGCGAGGACTTCAAGAAGGTCAAATCACAGTCCAAGATGGC AGCCAAAGCCAAGAAGATCTTTGCTGAATTCATCGCAATCCAGGCTTGCAAAGAGGTAAACCTGGACTCC TACACACGAGAACACACCAAGGAGAATCTGCAGAGCATCACCCGAGGCTGCTTTGACTTGGCACAGAAAC GTATCTTTGGGCTCATGGAGAAGGACTCTTACCCTCGCTTCCTCCGCTCTGACCTCTACCTGGACCTCAT TAACCAGAAGAAGATGAGTCCCCCGCTCTAG
Translation (966 aa):
MNRFNGLCKVCSERRYRQITIRRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEH WKCVELAHEIRSCPSEIILLVWRVVPQIKPGPDGGVLRRASCKSTHDLLSPPNKREKNCTHGAPVRPEQR HSCHLVCDSSDGLLLGGWERYTEVGKRSGQHTLPALSRTTTPTDPNYIILAPLNPGSQLLRPVYQEDTIP EEPGTTTKGKSYTGLGKKSRLMKTVQTMKGHSNYQDCSALRPHIPHSSYGTYVTLAPKVLVFPVFVQPLD LCNPARTLLLSEELLLYEGRNKTSQVTLFAYSDLLLFTKEEEPGRCDVLRNPLYLQSVKLQEGSSEDLKF CVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAAPPTERKMFETEADEKEMPLVEGKGPGAE EPAPSKNPSPGQELPPGQDLPPSKDPSPSQELPAGQDLPPSKDPSPSQELPAGQDLPPSKDPSPSQELPV GQDLPPRKDSSGQEAAPGPESPSSEDIATCPKPPQSPETSTSKDSPPGQGSSPTTELPSCQGLPAGQEST SQDPLLSQEPPVIPESSASVQKRLPSQESPSSLGSLPEKDLAEQTISSGEPPVATGAVLPASRPNFVIPE VRLDNAYSQLDGAHGGSSGEDEDAEEGEEGGEGEEDEEDDTSDDNYGDRSEAKRSSLIETGQGAEGGFSL RVQNSLRRRTHSEGSLLQESRGPCFASDTTLHCSDGEGATSTWAIPSPRTLKKELGRNGGSMHHLSLFFT GHRKMSGTDLTECDEASRKRKSKNIAKDMKNKLAIFRRRNESPGAQPASKTDKTTKSFKPTSEEALKWSE SLEKLLLHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEFIAIQACKEVNLDS YTREHTKENLQSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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