NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS50876.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50876.1 Public Mus musculus 3 Tmem212 23 108 98 CCDS HistoryNCBI Gene:208613Re-query CCDS DB by CCDS ID:50876.1Re-query CCDS DB by GeneID:208613See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50876.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058077.3 ENSMUSP00000049832.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058077.3Link to Ensembl Protein Viewer:ENSMUSP00000049832.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000058077Re-query CCDS DB by Protein ID:ENSMUSP00000049832
Original member Current member NCBI NM_001164437.1 NP_001157909.1 Accepted alive Link to Nucleotide Sequence:NM_001164437.1Link to Protein Sequence:NP_001157909.1Re-query CCDS DB by Nucleotide ID:NM_001164437Re-query CCDS DB by Protein ID:NP_001157909Link to BLAST:NP_001157909.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157909.1 187 Q8C6V3 187 100% 0 0

Chromosomal Locations for CCDS 50876.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 27866193 27866213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27884793 27885116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27886448 27886507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27896185 27896343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (564 nt):
ATGAAGGGCCTCTACCAGGCTGCTGGCAGGACCCTGGTTACTCTGGGGGGCCTCAGCATCTTCTCAGGAG
CCATTGCCTTCTTCCCTGTCTTTTCCTGCAAGCTTTGGTACACAGGATGGAGCGTTTGGATTGCCTGTCC
CATCTGGAACGGGGCTTTGGCTGTCACAGCTGGATCACTTGTGCTGCTGGCTCACAGAGAGTGGACCCAG
AGACACTTGTGGGAAGCCGTGTTCACCTTCGTAATTCTGAGCATTCTGGGATGTCCACTTCATTTCACAG
TAGCCTTGCAATCTGCCCTCCTTGGTCCATATTGCTTCTACTCTTTCTCAGGGGTTGCGGGGACCAATTA
CCTTGGTTACGTGGTTACCTTTCCTTTTCCGTACACGAAGTTCCCGTCGGTCTGTGTGGACCCGCTCCAC
TATGAAGAGTATCACCTGACCCTTCAGGTCCTGGACCTGTGCCTGAGCCTCATCCTATTCTGTGTGTCCC
TGGCAGTGTTCATCAAGCTTTCTGCAAGACTGATGCAGACCGGATACATAAATGGTCCAGAGAATCCACA
ATAA

Translation (187 aa):
MKGLYQAAGRTLVTLGGLSIFSGAIAFFPVFSCKLWYTGWSVWIACPIWNGALAVTAGSLVLLAHREWTQ
RHLWEAVFTFVILSILGCPLHFTVALQSALLGPYCFYSFSGVAGTNYLGYVVTFPFPYTKFPSVCVDPLH
YEEYHLTLQVLDLCLSLILFCVSLAVFIKLSARLMQTGYINGPENPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH