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Report for CCDS50606.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50606.1 Public Mus musculus 2 Gpr155 23 108 98 CCDS HistoryNCBI Gene:68526Re-query CCDS DB by CCDS ID:50606.1Re-query CCDS DB by GeneID:68526See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50606.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076463.11 ENSMUSP00000075788.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076463.11Link to Ensembl Protein Viewer:ENSMUSP00000075788.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000076463Re-query CCDS DB by Protein ID:ENSMUSP00000075788
Original member Current member EBI ENSMUST00000112043.7 ENSMUSP00000107674.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112043.7Link to Ensembl Protein Viewer:ENSMUSP00000107674.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112043Re-query CCDS DB by Protein ID:ENSMUSP00000107674
Original member Current member NCBI NM_001190297.2 NP_001177226.1 Accepted alive Link to Nucleotide Sequence:NM_001190297.2Link to Protein Sequence:NP_001177226.1Re-query CCDS DB by Nucleotide ID:NM_001190297Re-query CCDS DB by Protein ID:NP_001177226Link to BLAST:NP_001177226.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177226.1 868 A2AWR3-1 868 100% 0 0

Chromosomal Locations for CCDS 50606.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 73343457 73343757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73348137 73348274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73349627 73349691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73351849 73351944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73353617 73353753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73356598 73356702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73362425 73362635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73363932 73364022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73364168 73364252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73367481 73367598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73368314 73368397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73369986 73370141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73370965 73371130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73373615 73374014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73381824 73382277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2607 nt):
ATGGATTCTTATTTCTCAGCAAAGAACTCAACGCTTGCTGGTGATATGAATGCGACTTGGCCTGCCTCTC
ATGGATTTAATGCCACCGGCGATCCACCTTCGATGTCGATAACCCGGCTCTTCCCGGCCTTACTGGAGTG
CTTTGGCATAGTCCTTTGTGGCTACATAGCAGGAAGGGCCAATATCATAACCTCAACACAGGCCAAAGGA
CTGGGGAATTTCGTCTCCAGATTTGCCCTTCCAGCCTTATTATTCAAAAACATGGTTGTGCTTAATTTTT
CCAACGTGGACTGGGCTTTTCTCTACAGCGTCTTAATTGGCAAAGCCTCCGTGTTTTTCATTGTGTGTGT
ATTAACCTTATTGGTGGCCAGTCCTGAGAGCCGGTTTAGCAAAGCTGGACTATTCCCTATTTTTGCTACA
CAGAGTAATGACTTTGCTTTGGGATACCCTATAGTTGAAGCTCTGTACCAATCTACATATCCAGAGTATC
TGCAGTACATTTATTTGGTGGCACCAATATCTCTTATGATGCTAAACCCCATAGGGTTTATCTTCTGTGA
AATCCAGAAGTCAAAAGACACTCAAAATGCTTCTCAAAATAAAGCAAAAATTGTGGGACTTGGATTTCTA
CGCGTGTTACAGAACCCGATAGTATTTATGGTCTTTGTTGGCATTGCCTTCAATTTTATTCTTGATAAAA
AGATCCCAGTATATATGGAAAACTTTCTGGATGGGCTTGCAAATTCCTTCTCTGGATCAGCCCTGTTTTA
TCTTGGTCTGACCATGGTAGGAAAAATCAGGCGACTGAAGAAGTCGGCGTTTGTGGTTCTTACTCTTCTC
ATCACAGCCAAACTCCTGGTGCTGCCCCTCCTGTGCAGAGAAATGGTGGAACTCCTGGACAAGGGGGACA
GCGTAGTGAACCATACAAGCCTGTCCAACTATGCGTTTCTATATGGTGTCTTCCCTGTGGCTCCAGGAGT
GGCTATCTTTGCAACACAGTTCAACATGGAAGTGGAGATTATAACCTCAGGCATGGTAATAAGTACATTT
GTGTCTGCTCCAATCATGTATGTTTCTGCCTGGTTATTAACCTTTCCTACCATGGATGCCAAGCCACTGG
CGTATGCCATTCAGAATGTTAGCTTTGATATAAGTATTATCAGCCTGGTCTCCTTGATCTGGTCCCTGTC
TATTCTTCTCTTGAGTAAGAAATATAAGCAGCTCCCACATATGCTCACAGCGAACTTACTCATCGCTCAG
ACTATTGTTTGTGCTGGAATGATGATATGGAATTTTGTTAAAGAAAAAAATTTTGTTGGACAAATTTTGG
TGTTTGTTTTATTGTACAGCTCCCTGTACAGCACCTATCTGTGGACAGGCCTTCTAGCAGTTTCTTTGTT
TCTTTTAAAGAAGCGCGAGAGCGTTCAGCTCCCGGTGGGAATCATCATCATCTCTGGCTGGGGGATCCCT
GCTCTCCTTGTGGGCGTGCTTCTGATAACTGGAAAACACAACGGAGACAGCATTGACTCAGCCTTCTTTT
ATGGAAAAGAGCAGATGATCACCACGGCAGTCACCCTGTTCTGCAGCATTCTCATAGCTGGGGTGTCACT
CATGTGCATGAACCGCACCACCCAAGCTGGTCACTACGAAGGTTTCGGCCAGTCTCAGAACCACAAACCA
GTAGAGCCTGGAAGCACTGCGTTTGAGGAGAACCCAGCACCAACAAATGAACCAGAACTCTTCCCAAGTT
CTATCCCAGAAACAAGTTGCTGTTCTTGCTCCTTGGGAAATGGTGAATTACGCTGCCCATCCATAGAGCC
AGTAACGAACTCAAGTGCTAGTGGGCCTATGCCTTCTTCCTTTGAGAAAACCGACCACTGTGTGAGCCGT
TGTGACTCCCAGAGCTGCATCCTCGCCCAGGAAGAAGAGCAGTACCTGCAGAGCGGAGACCCACAGCTGA
CCCGGCACGTCCTGTTGTGCTTGCTGCTTATCATCGGCCTCTTTGCTAATCTCTCCAGCTGCCTGTGGTG
GTTGTTCAACCACGAGACGGGACGGCTCTATGTTGAATTACAGTTTTTCTGTGCCGTGTTTAACTTTGGC
CAGGGATTTATTTCCTTTGGAATCTTTGGGCTGGACAAACATCTAATCATCCTACCTTTCAAAAGAAGGC
TTGAATTCCTGTGGAACAACAAAGAAGCAGCAGCAGACAGAGAATCCCCCGTTTCCGAGGAAATAAAAAT
GACCTGTCAACAGTTTGTGCATTATCACCGCGACCTGTGCATCCGAAACATCGTCAGAGAAAGGAGGTGT
GGTGCCAAGACTTCTGCCGGGACCTTCTGTGGCTGTGACCTGGTGAACTGGCTCATCGAAGTCGGCCTTG
CTTCTGACCGCGGCGAAGCTGTGATCTACGGAGACAGACTGGTGCAAGGGGGGGTCATCCAACACATCAC
CAATGAATACGAGTTCCGGGACGAGTATCTCTTTTACCGATTCCTTCAGAAGAGTCCTGAGCAGAGTCCT
CCTGCCCGTACTCTAAGAGACCACCAGGAGGAAAGCTATAAAGAAATCGGTCACTCATCTCCACCCTCAG
TCTCCCCTAAGACTTAA

Translation (868 aa):
MDSYFSAKNSTLAGDMNATWPASHGFNATGDPPSMSITRLFPALLECFGIVLCGYIAGRANIITSTQAKG
LGNFVSRFALPALLFKNMVVLNFSNVDWAFLYSVLIGKASVFFIVCVLTLLVASPESRFSKAGLFPIFAT
QSNDFALGYPIVEALYQSTYPEYLQYIYLVAPISLMMLNPIGFIFCEIQKSKDTQNASQNKAKIVGLGFL
RVLQNPIVFMVFVGIAFNFILDKKIPVYMENFLDGLANSFSGSALFYLGLTMVGKIRRLKKSAFVVLTLL
ITAKLLVLPLLCREMVELLDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTF
VSAPIMYVSAWLLTFPTMDAKPLAYAIQNVSFDISIISLVSLIWSLSILLLSKKYKQLPHMLTANLLIAQ
TIVCAGMMIWNFVKEKNFVGQILVFVLLYSSLYSTYLWTGLLAVSLFLLKKRESVQLPVGIIIISGWGIP
ALLVGVLLITGKHNGDSIDSAFFYGKEQMITTAVTLFCSILIAGVSLMCMNRTTQAGHYEGFGQSQNHKP
VEPGSTAFEENPAPTNEPELFPSSIPETSCCSCSLGNGELRCPSIEPVTNSSASGPMPSSFEKTDHCVSR
CDSQSCILAQEEEQYLQSGDPQLTRHVLLCLLLIIGLFANLSSCLWWLFNHETGRLYVELQFFCAVFNFG
QGFISFGIFGLDKHLIILPFKRRLEFLWNNKEAAADRESPVSEEIKMTCQQFVHYHRDLCIRNIVRERRC
GAKTSAGTFCGCDLVNWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQKSPEQSP
PARTLRDHQEESYKEIGHSSPPSVSPKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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