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Report for CCDS5001.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5001.1 Public Homo sapiens 6 MRAP2 24 110 108 CCDS HistoryNCBI Gene:112609Re-query CCDS DB by CCDS ID:5001.1Re-query CCDS DB by GeneID:112609See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5001.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257776.5 ENSP00000257776.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257776.5Link to Ensembl Protein Viewer:ENSP00000257776.4Re-query CCDS DB by Nucleotide ID:ENST00000257776Re-query CCDS DB by Protein ID:ENSP00000257776
Original member Current member NCBI NM_001346542.2 NP_001333471.1 Accepted alive Link to Nucleotide Sequence:NM_001346542.2Link to Protein Sequence:NP_001333471.1Re-query CCDS DB by Nucleotide ID:NM_001346542Re-query CCDS DB by Protein ID:NP_001333471Link to BLAST:NP_001333471.1
Original member Current member NCBI NM_001346544.2 NP_001333473.1 Accepted alive Link to Nucleotide Sequence:NM_001346544.2Link to Protein Sequence:NP_001333473.1Re-query CCDS DB by Nucleotide ID:NM_001346544Re-query CCDS DB by Protein ID:NP_001333473Link to BLAST:NP_001333473.1
Original member Current member NCBI NM_138409.4 NP_612418.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138409.4Link to Protein Sequence:NP_612418.2Re-query CCDS DB by Nucleotide ID:NM_138409Re-query CCDS DB by Protein ID:NP_612418Link to BLAST:NP_612418.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333471.1 205 Q96G30 205 100% 0 0
NP_001333473.1 205 Q96G30 205 100% 0 0
NP_612418.2 205 Q96G30 205 100% 0 0

Chromosomal Locations for CCDS 5001.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 84055319 84055445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 84062893 84062992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 84089091 84089481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGTCCGCCCAGAGGTTAATTTCTAACAGAACCTCCCAGCAATCGGCATCTAATTCTGATTACACCTGGG
AATATGAATATTATGAGATTGGACCAGTTTCCTTTGAAGGACTGAAGGCTCATAAATATTCCATTGTGAT
TGGATTTTGGGTTGGTCTTGCAGTCTTCGTGATTTTTATGTTTTTTGTGCTGACCTTGCTGACCAAGACA
GGAGCCCCACACCAAGACAATGCAGAGTCCTCAGAGAAGAGATTCAGAATGAACAGCTTTGTGTCAGACT
TTGGAAGACCTCTGGAGCCAGATAAAGTATTTTCTCGCCAAGGCAACGAGGAGTCCAGGTCTCTCTTTCA
CTGCTACATCAATGAGGTGGAACGCTTGGACAGAGCCAAAGCTTGTCACCAGACCACAGCCCTTGACAGT
GACGTCCAACTCCAGGAAGCCATCAGAAGCAGTGGGCAGCCAGAGGAGGAGCTGAACAGGCTCATGAAGT
TTGACATCCCCAACTTTGTGAACACAGACCAGAACTACTTTGGGGAGGATGATCTTCTGATTTCTGAACC
ACCTATTGTTCTGGAAACTAAGCCACTTTCCCAGACCTCACACAAAGACCTGGATTGA

Translation (205 aa):
MSAQRLISNRTSQQSASNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFFVLTLLTKT
GAPHQDNAESSEKRFRMNSFVSDFGRPLEPDKVFSRQGNEESRSLFHCYINEVERLDRAKACHQTTALDS
DVQLQEAIRSSGQPEEELNRLMKFDIPNFVNTDQNYFGEDDLLISEPPIVLETKPLSQTSHKDLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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