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Report for CCDS48075.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48075.1 Public Homo sapiens X PUDP 24 110 108 CCDS HistoryNCBI Gene:8226Re-query CCDS DB by CCDS ID:48075.1Re-query CCDS DB by GeneID:8226See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48075.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381077.10 ENSP00000370467.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381077.10Link to Ensembl Protein Viewer:ENSP00000370467.6Re-query CCDS DB by Nucleotide ID:ENST00000381077Re-query CCDS DB by Protein ID:ENSP00000370467
Original member Current member NCBI NM_012080.5 NP_036212.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012080.5Link to Protein Sequence:NP_036212.3Re-query CCDS DB by Nucleotide ID:NM_012080Re-query CCDS DB by Protein ID:NP_036212Link to BLAST:NP_036212.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036212.3 228 Q08623-1 228 100% 0 0

Chromosomal Locations for CCDS 48075.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 7050296 7050472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7077220 7077449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7105620 7105838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7148053 7148113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGGCGGCGCCCCCGCAGCCCGTCACCCACCTCATCTTTGACATGGACGGACTTCTTCTGGATACTGAAC
GGCTGTATTCAGTGGTGTTTCAAGAAATATGTAATCGCTATGACAAGAAATACAGCTGGGATGTAAAGTC
CCTGGTTATGGGTAAGAAGGCATTAGAGGCGGCACAGATTATAATAGACGTCTTGCAGCTCCCGATGTCC
AAAGAGGAGCTGGTGGAAGAAAGCCAAACGAAGTTAAAGGAAGTGTTCCCCACGGCTGCGCTCATGCCAG
GGGCGGAGAAACTCATCATCCACCTGCGGAAACATGGCATCCCCTTTGCACTGGCCACCAGCTCGGGGTC
CGCGTCGTTCGATATGAAGACAAGCCGCCACAAGGAGTTCTTCAGCTTGTTTTCCCACATTGTGCTGGGA
GATGACCCCGAAGTGCAGCATGGCAAGCCAGACCCGGACATCTTCCTAGCTTGTGCCAAGAGGTTCTCTC
CCCCTCCTGCTATGGAGAAGTGCCTTGTCTTTGAAGATGCTCCCAATGGGGTGGAGGCGGCCCTGGCAGC
TGGGATGCAGGTGGTCATGGTTCCTGACGGAAACTTGAGCCGAGATCTGACAACAAAGGCCACCCTGGTG
CTGAATTCCCTGCAGGACTTCCAGCCCGAGCTGTTTGGTTTGCCCTCCTATGAGTGA

Translation (228 aa):
MAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMS
KEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLG
DDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLV
LNSLQDFQPELFGLPSYE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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