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Report for CCDS47800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47800.1 Public Homo sapiens 8 C8orf74 24 110 108 CCDS HistoryNCBI Gene:203076Re-query CCDS DB by CCDS ID:47800.1Re-query CCDS DB by GeneID:203076See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47800.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304519.10 ENSP00000307129.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304519.10Link to Ensembl Protein Viewer:ENSP00000307129.5Re-query CCDS DB by Nucleotide ID:ENST00000304519Re-query CCDS DB by Protein ID:ENSP00000307129
Original member Current member NCBI NM_001040032.2 NP_001035121.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040032.2Link to Protein Sequence:NP_001035121.2Re-query CCDS DB by Nucleotide ID:NM_001040032Re-query CCDS DB by Protein ID:NP_001035121Link to BLAST:NP_001035121.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035121.2 294 Q6P047 294 100% 0 0

Chromosomal Locations for CCDS 47800.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 10672666 10672713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 10674646 10674838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 10697599 10698005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 10700235 10700471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGGCACTCTTAACACCCCAGGGAGTGAAAGAAGTCTTCCAACTTCAGAGACCACAAGGTCGGGAGCGCC
TGCGGAGGCTTCTGAACTGGGAGGAGTTTGACGAACAGAGAGACTCCCGGAGGAGCATCCTGCTGGACAC
CCTCTACGAGAGCATCATCTTTGCAGTGGGCAAAGGCTTCCCATGGGTGGAGGTGGCCCAGGTGGTCAAG
TTCACAGAAGAGCTGCTAAGGGAAACCAAAGGCTGCTCCATTACTGAGGCTGTGACGATCCTGGGGAACA
AGCTTAGAGATTACCGGGGCCATTTCAACACCACCCACCTGCTGGCCCTCTGTGACTACTTCCACCACAC
CTTCATCCGCCACTACAAACTCTACCAGTATGTCCTGGGCCAGGACCAGCAGGTCGACCTGACCGTTGCC
CACCTGGAGGTGTGCATGCCACCCCATCCCCTCCCGCTGGCCGAGGGCATGGACAGGGACTTGTGGATCC
ACGAGCAGCAGGTGGCCACACTGACGGAGGCCGAGGCACAGAAGCGCGCCGACGTGCTGCTCCTGAAAGA
GGCGCTGCGCCTGGAGCGGGAGAACTCGCTGCAGAAGGCGTTCGCTGCCGCCGCGCCTGCGCAGCCCGGC
CAGGTCCTGGAGAGACAGGAGTTGGAGAGCCTCATCTGCCAGGCAGTCCACACCCAGATGGAGCTCCTGC
AGGAGCTGCTGCAGCGCCAGATCCAGAACACATTCGCCATCTTGGACCTGAAGCTTCAGAAGAAGACTCT
GAACCTCAACGCCCCCACCCCTATCCCGCCCCCCATCACCAGCCACGCAGGCCAGGAGGAAGCCCTGAAG
CCCCAAAGAGCGAGCAAAGGAAAGAAAGCGAAGGCAAGGAAGTAG

Translation (294 aa):
MALLTPQGVKEVFQLQRPQGRERLRRLLNWEEFDEQRDSRRSILLDTLYESIIFAVGKGFPWVEVAQVVK
FTEELLRETKGCSITEAVTILGNKLRDYRGHFNTTHLLALCDYFHHTFIRHYKLYQYVLGQDQQVDLTVA
HLEVCMPPHPLPLAEGMDRDLWIHEQQVATLTEAEAQKRADVLLLKEALRLERENSLQKAFAAAAPAQPG
QVLERQELESLICQAVHTQMELLQELLQRQIQNTFAILDLKLQKKTLNLNAPTPIPPPITSHAGQEEALK
PQRASKGKKAKARK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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