CCDS Report for Consensus CDS

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Report for CCDS47397.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
47397.1	Public	Homo sapiens	6	CCHCR1	24	110	108

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47397.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000451521.6	ENSP00000401039.2		Accepted	alive
		NCBI	NM_001105563.3	NP_001099033.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001099033.1	835	Q8TD31-3	835	100%	0	0

Chromosomal Locations for CCDS 47397.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)

Genome Browser links:

Chromosome	Start	Stop
6	31142592	31142716
6	31142963	31143134
6	31143262	31143413
6	31144687	31144788
6	31144885	31145073
6	31145166	31145302
6	31145448	31145493
6	31145696	31145808
6	31148405	31148511
6	31148618	31148728
6	31150066	31150215
6	31150455	31150565
6	31150725	31150860
6	31150959	31151122
6	31154496	31154799
6	31156731	31156836
6	31157023	31157089
6	31157385	31157600

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2508 nt):
ATGTGGCCACATTCAGCTGGGGCCAGGCCTTGGGCCAGCACTTTAACAGGGAAGGACCCAAGAGTCATGG CCTGCTGGTGTCTGGATGGGCTTCCCTCAGGCCTTGCTGAGCCATGGAGAGAACTCTGGAGATGGCGCTC AAGACCCCTGCACTGTGTACCTCCTTTCTCACCTCTGGCCAGGAGCAGCAGGGACCATAGAAACTTAAGG AGGAGGGGGAACATAGATGGCTGGAGACAGAATCTAGAGCCTTCAAATAATGTGGAGATGTTTCCACCTT CAGGCCATCAAGATGTCTCAGAGAGGCGGCTAGACACCCAGAGACCTCAAGTGACCATGTGGGAACGGGA TGTTTCCAGTGACAGGCAGGAGCCAGGGCGGAGAGGCAGGTCCTGGGGGCTGGAGGGGTCACAGGCCCTG AGCCAGCAGGCTGAGGTGATCGTTCGGCAGCTGCAAGAGCTGCGGCGGCTGGAGGAGGAGGTCCGGCTCC TGCGGGAGACCTCGCTGCAGCAGAAGATGAGGCTAGAGGCCCAGGCCATGGAGCTAGAGGCTCTGGCACG GGCGGAGAAGGCCGGCCGAGCTGAGGCTGAGGGCCTGCGTGCTGCTTTGGCTGGGGCTGAGGTTGTCCGG AAGAACTTGGAAGAGGGGAGCCAGCGGGAGCTGGAAGAGGTTCAGAGGCTGCACCAAGAGCAGCTGTCCT CTTTGACACAGGCTCACGAGGAGGCTCTTTCCAGTTTGACCAGCAAGGCTGAGGGCTTGGAGAAGTCTCT GAGTAGTCTGGAAACCAGAAGAGCAGGGGAAGCCAAGGAGCTGGCCGAGGCTCAGAGGGAGGCCGAGCTG CTTCGGAAGCAGCTGAGCAAGACCCAGGAAGACTTGGAGGCTCAGGTGACCCTGGTTGAGAATCTAAGAA AATATGTTGGGGAACAAGTGCCTTCTGAGGTCCACAGCCAGACATGGGAACTGGAGCGACAGAAGCTTCT GGAAACCATGCAGCACTTGCAGGAGGACCGGGACAGCCTGCATGCCACCGCGGAGCTGCTGCAGGTGCGG GTGCAGAGCCTCACACACATCCTCGCCCTGCAGGAGGAGGAGCTGACCAGGAAGGTTCAACCTTCAGATT CCCTGGAGCCTGAGTTTACCAGGAAGTGCCAGTCCCTGCTGAACCGCTGGCGGGAGAAGGTGTTTGCCCT CATGGTGCAGCTAAAGGCCCAGGAGCTGGAACACAGTGACTCTGTTAAGCAGCTGAAGGGACAGGTGGCC TCACTCCAGGAAAAAGTGACATCCCAGAGCCAGGAGCAGGCCATCCTGCAGCGATCCCTGCAGGACAAAG CCGCAGAGGTGGAGGTGGAGCGTATGGGTGCCAAGGGCCTGCAGTTGGAGCTGAGCCGTGCTCAGGAGGC CAGGCGTCGGTGGCAGCAGCAGACAGCCTCAGCCGAGGAGCAGCTGAGGCTTGTGGTCAATGCTGTCAGC AGCTCTCAGATCTGGCTCGAGACCACCATGGCTAAGGTGGAAGGGGCTGCCGCCCAGCTTCCCAGCCTCA ACAACCGACTCAGCTATGCTGTCCGCAAGGTCCACACCATTCGGGGCCTGATTGCTCGAAAGCTTGCCCT TGCTCAGCTGCGCCAGGAGAGCTGTCCCCTACCACCACCGGTCACAGACGTGAGCCTTGAGTTGCAGCAG TTGCGGGAAGAACGGAACCGCCTGGATGCAGAACTGCAGCTGAGTGCCCGCCTCATCCAGCAGGAGGTGG GCCGGGCTCGGGAGCAAGGGGAGGCAGAGCGGCAGCAGCTGAGCAAGGTGGCCCAGCAGCTGGAGCAGGA GCTGCAGCAGACCCAGGAGTCCCTGGCTAGCTTGGGGCTGCAGCTGGAGGTAGCACGCCAGGGCCAGCAG GAGAGCACAGAGGAGGCTGCCAGTCTGCGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGCCC TGCAAGAAAAGGTGGCTGAAGTGGAAACTCGGCTGCGGGAGCAACTCTCAGACACAGAGAGGAGGCTGAA CGAGGCTCGGAGGGAGCATGCCAAGGCCGTGGTCTCCTTACGCCAGATTCAGCGCAGAGCCGCCCAGGAA AAGGAGCGGAGCCAGGAACTCAGGCGTCTGCAGGAGGAGGCCCGGAAGGAGGAGGGGCAGCGACTGGCCC GGCGCTTGCAGGAGCTAGAGAGGGATAAGAACCTCATGCTGGCCACCTTGCAGCAGGAAGGTCTCCTCTC CCGTTACAAGCAGCAGCGACTGTTGACAGTTCTTCCTTCCCTACTGGATAAGAAGAAATCTGTGGTGTCC AGCCCCAGGCCTCCAGAGTGTTCAGCATCTGCACCTGTAGCAGCAGCAGTGCCCACCAGGGAGTCCATAA AAGGGTCCCTCTCTGTCCTGCTCGATGACCTGCAGGACCTGAGTGAAGCCATTTCCAAAGAGGAAGCTGT TTGTCAAGGAGACAACCTTGACAGATGCTCCAGCTCCAATCCCCAGATGAGCAGCTAA
Translation (835 aa):
MWPHSAGARPWASTLTGKDPRVMACWCLDGLPSGLAEPWRELWRWRSRPLHCVPPFSPLARSSRDHRNLR RRGNIDGWRQNLEPSNNVEMFPPSGHQDVSERRLDTQRPQVTMWERDVSSDRQEPGRRGRSWGLEGSQAL SQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVR KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAEL LRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELERQKLLETMQHLQEDRDSLHATAELLQVR VQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVA SLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVS SSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQESCPLPPPVTDVSLELQQ LREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQ ESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQE KERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVVS SPRPPECSASAPVAAAVPTRESIKGSLSVLLDDLQDLSEAISKEEAVCQGDNLDRCSSSNPQMSS

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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