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Report for CCDS47069.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47069.1 Public Homo sapiens 4 GRSF1 24 110 108 CCDS HistoryNCBI Gene:2926Re-query CCDS DB by CCDS ID:47069.1Re-query CCDS DB by GeneID:2926See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47069.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254799.11 ENSP00000254799.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254799.11Link to Ensembl Protein Viewer:ENSP00000254799.6Re-query CCDS DB by Nucleotide ID:ENST00000254799Re-query CCDS DB by Protein ID:ENSP00000254799
Original member Current member NCBI NM_002092.4 NP_002083.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002092.4Link to Protein Sequence:NP_002083.4Re-query CCDS DB by Nucleotide ID:NM_002092Re-query CCDS DB by Protein ID:NP_002083Link to BLAST:NP_002083.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002083.4 480 Q12849-1 480 100% 0 0

Chromosomal Locations for CCDS 47069.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 70824319 70824368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70825296 70825431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70826124 70826245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70827852 70828036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70831539 70831674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70832307 70832450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70833118 70833273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70836158 70836314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70839471 70839827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1443 nt):
ATGGCCGGCACGCGCTGGGTACTCGGGGCGCTGCTCCGGGGCTGCGGCTGTAACTGCAGCAGCTGCCGGC
GCACCGGCGCCGCCTGCCTGCCCTTCTACTCCGCCGCTGGCTCTATCCCGTCGGGCGTCTCGGGCCGCCG
CCGCCTGCTGCTGCTGCTCGGGGCCGCCGCGGCCGCTGCCTCCCAGACGCGTGGCCTCCAGACCGGGCCT
GTGCCTCCCGGGAGGCTGGCGGGGCCTCCCGCTGTGGCCACCTCTGCCGCGGCCGCGGCCGCCGCGTCCT
ACTCTGCCCTCCGTGCCTCTCTGCTGCCGCAGTCGCTGGCGGCGGCGGCCGCCGTCCCGACGCGCAGCTA
CAGCCAGGAGTCCAAAACTACTTACCTGGAAGACCTTCCACCACCCCCTGAGTATGAATTGGCCCCGTCC
AAGTTAGAAGAGGAAGTGGATGATGTCTTTCTCATTCGAGCTCAAGGACTGCCCTGGTCATGCACTATGG
AAGATGTGCTTAACTTTTTTTCAGACTGCAGAATCCGCAACGGTGAGAATGGAATACATTTTCTCCTAAA
CAGAGATGGGAAACGAAGGGGTGATGCCTTAATTGAAATGGAGTCAGAGCAGGATGTGCAGAAAGCCTTA
GAGAAGCACCGCATGTACATGGGCCAGCGGTATGTGGAAGTATATGAGATAAACAATGAAGATGTGGATG
CCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGTAAATGATGGTGTGGTTCGTTTGAGAGGACT
TCCTTATAGTTGCAATGAGAAAGACATTGTAGACTTCTTTGCAGGACTGAATATAGTTGACATTACTTTT
GTGATGGACTATAGAGGGAGGCGAAAAACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAAATGGCCA
ACCAAGCCCTGTTGAAACACAGGGAAGAAATTGGTAATCGATACATCGAGATATTTCCAAGCAGAAGGAA
TGAAGTTCGAACACATGTCGGTTCTTATAAGGGAAAGAAAATCGCATCTTTTCCTACTGCTAAGTATATA
ACTGAGCCAGAAATGGTCTTTGAAGAACATGAAGTAAATGAGGATATTCAACCCATGACAGCTTTTGAAA
GTGAGAAGGAAATAGAATTGCCTAAGGAGGTGCCAGAAAAGCTTCCAGAGGCTGCTGATTTTGGAACTAC
GTCTTCTCTGCATTTTGTCCACATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGACATTATAAACTTT
TTTGCTCCACTCAAGCCTGTTAGAATCACCATGGAATACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTG
ATGTGCACTTTGAGACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGTTCATCATAG
GTATATTGAACTGTTCCTGAATTCATGTCCAAAAGGAAAATAA

Translation (480 aa):
MAGTRWVLGALLRGCGCNCSSCRRTGAACLPFYSAAGSIPSGVSGRRRLLLLLGAAAAAASQTRGLQTGP
VPPGRLAGPPAVATSAAAAAAASYSALRASLLPQSLAAAAAVPTRSYSQESKTTYLEDLPPPPEYELAPS
KLEEEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKAL
EKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVDITF
VMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSYKGKKIASFPTAKYI
TEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKLPEAADFGTTSSLHFVHMRGLPFQANAQDIINF
FAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVHHRYIELFLNSCPKGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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