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Report for CCDS46750.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46750.1 Public Homo sapiens 3 GHRL 24 110 108 CCDS HistoryNCBI Gene:51738Re-query CCDS DB by CCDS ID:46750.1Re-query CCDS DB by GeneID:51738See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46750.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000287656.11 ENSP00000287656.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000287656.11Link to Ensembl Protein Viewer:ENSP00000287656.7Re-query CCDS DB by Nucleotide ID:ENST00000287656Re-query CCDS DB by Protein ID:ENSP00000287656
Original member Current member EBI ENST00000430179.5 ENSP00000399922.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430179.5Link to Ensembl Protein Viewer:ENSP00000399922.1Re-query CCDS DB by Nucleotide ID:ENST00000430179Re-query CCDS DB by Protein ID:ENSP00000399922
Original member Current member NCBI NM_001134941.3 NP_001128413.1 Accepted alive Link to Nucleotide Sequence:NM_001134941.3Link to Protein Sequence:NP_001128413.1Re-query CCDS DB by Nucleotide ID:NM_001134941Re-query CCDS DB by Protein ID:NP_001128413Link to BLAST:NP_001128413.1
Original member Current member NCBI NM_001302823.2 NP_001289752.1 Accepted alive Link to Nucleotide Sequence:NM_001302823.2Link to Protein Sequence:NP_001289752.1Re-query CCDS DB by Nucleotide ID:NM_001302823Re-query CCDS DB by Protein ID:NP_001289752Link to BLAST:NP_001289752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128413.1 116 Q9UBU3-2 116 100% 0 0
NP_001289752.1 116 Q9UBU3-2 116 100% 0 0

Chromosomal Locations for CCDS 46750.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 10285875 10285894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10286704 10286812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10289762 10289875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10290073 10290180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGCCCTCCCCAGGGACCGTCTGCAGCCTCCTGCTCCTCGGCATGCTCTGGCTGGACTTGGCCATGGCAG
GCTCCAGCTTCCTGAGCCCTGAACACCAGAGAGTCCAGAGAAAGGAGTCGAAGAAGCCACCAGCCAAGCT
GCAGCCCCGAGCTCTAGCAGGCTGGCTCCGCCCGGAAGATGGAGGTCAAGCAGAAGGGGCAGAGGATGAA
CTGGAAGTCCGGTTCAACGCCCCCTTTGATGTTGGAATCAAGCTGTCAGGGGTTCAGTACCAGCAGCACA
GCCAGGCCCTGGGGAAGTTTCTTCAGGACATCCTCTGGGAAGAGGCCAAAGAGGCCCCAGCCGACAAGTG
A

Translation (116 aa):
MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLRPEDGGQAEGAEDE
LEVRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEAPADK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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