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Report for CCDS46670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46670.1 Public Homo sapiens 22 PPIL2 24 110 108 CCDS HistoryNCBI Gene:23759Re-query CCDS DB by CCDS ID:46670.1Re-query CCDS DB by GeneID:23759See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46670.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000626352.2 ENSP00000486725.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000626352.2Link to Ensembl Protein Viewer:ENSP00000486725.1Re-query CCDS DB by Nucleotide ID:ENST00000626352Re-query CCDS DB by Protein ID:ENSP00000486725
Original member Current member NCBI NM_148176.3 NP_680481.1 Accepted alive Link to Nucleotide Sequence:NM_148176.3Link to Protein Sequence:NP_680481.1Re-query CCDS DB by Nucleotide ID:NM_148176Re-query CCDS DB by Protein ID:NP_680481Link to BLAST:NP_680481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_680481.1 527 Q13356-2 527 100% 0 0

Chromosomal Locations for CCDS 46670.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 21666100 21666131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21669913 21669962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21670566 21670611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21670997 21671059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21672330 21672381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21675064 21675115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21681299 21681390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21682437 21682526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21683182 21683257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21684753 21684913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21686483 21686558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21686892 21686998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21687643 21687732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21688073 21688106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21688732 21688849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21693816 21693872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21694593 21694665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21694755 21694817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21694937 21695070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21695398 21695496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21696885 21696903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1584 nt):
ATGGGGAAGCGACAGCACCAAAAGGACAAAATGTACATTACCTGTGCTGAATACACTCACTTTTATGGTG
GCAAGAAGCCAGATCTCCCACAAACAAATTTTCGTCGTTTACCTTTTGACCACTGCAGTCTCTCTCTGCA
GCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCGTCTTTGACTTACTGAACATTGTTCCATGGCTT
AAGAAGTACGGGACCAACCCCAGCAATGGAGAGAAGCTGGACGGGAGGTCCCTGATCAAGCTGAACTTTT
CCAAGAACAGTGAGGGGAAGTACCACTGCCCAGTGCTGTTTACCGTGTTCACCAACAACACCCACATCGT
GGCTGTGAGGACGACCGGCAACGTCTACGCCTATGAGGCAGTGGAACAGCTAAATATCAAGGCCAAGAAC
TTCCGGGACCTGCTGACCGACGAGCCCTTCTCCCGGCAGGACATCATCACCCTCCAGGACCCCACCAATT
TGGACAAGTTCAATGTCTCTAACTTCTATCATGTGAAGAATAACATGAAAATAATAGACCCAGATGAAGA
GAAGGCCAAACAGGACCCGTCTTATTATCTGAAAAATACAAATGCCGAGACCCGAGAGACCCTGCAGGAG
CTCTACAAGGAGTTCAAAGGGGACGAGATTCTGGCAGCCACCATGAAGGCCCCGGAGAAGAAGAAAGTGG
ACAAGCTGAACGCTGCCCACTATTCCACAGGGAAGGTCAGCGCTTCCTTCACCTCCACCGCGATGGTCCC
GGAGACCACACATGAAGCAGCTGCCATCGACGAGGATGTGCTGCGCTACCAGTTTGTGAAGAAGAAGGGC
TACGTGCGGCTGCACACCAACAAGGGCGACCTCAACCTGGAGCTGCACTGCGACCTGACACCAAAAACCT
GCGAAAACTTCATCAGGCTTTGCAAGAAGCATTATTACGATGGCACCATCTTCCACAGATCCATCCGGAA
CTTTGTGATCCAAGGGGGCGACCCCACAGGCACAGGCACGGGTGGGGAGTCATACTGGGGGAAGCCCTTC
AAAGACGAGTTCCGGCCCAACCTCTCGCACACGGGCCGCGGCATCCTCAGCATGGCCAACTCCGGGCCCA
ACAGCAACAGGTCTCAATTCTTCATCACGTTTCGCTCCTGTGCCTACCTGGACAAGAAGCATACCATCTT
TGGACGGGTTGTTGGGGGCTTTGACGTACTGACAGCCATGGAGAATGTGGAGAGTGACCCCAAAACTGAC
CGCCCTAAGGAGGAGATCCGCATTGATGCCACTACAGTGTTCGTGGACCCCTATGAGGAGGCCGATGCCC
AGATTGCGCAGGAGCGGAAGACACAGCTCAAGGTAGCCCCGGAGACCAAAGTGAAGAGCAGCCAGCCCCA
GGCAGGGAGCCAGGGCCCCCAGACCTTCCGCCAGGGCGTGGGCAAGTACATCAACCCAGCAGCCACCGAG
CAGCAGAGGAAGAGCCCTCAACCAGTGCCACTGTCCCCATGTCCAAGAAGAAGCCCAGTCGGGGTTTTGG
GGACTTCAGCTCCTGGTAGCAGCAGGCTGCCTGATGACCACTAG

Translation (527 aa):
MGKRQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCSLSLQPFVYPVCTPDGIVFDLLNIVPWL
KKYGTNPSNGEKLDGRSLIKLNFSKNSEGKYHCPVLFTVFTNNTHIVAVRTTGNVYAYEAVEQLNIKAKN
FRDLLTDEPFSRQDIITLQDPTNLDKFNVSNFYHVKNNMKIIDPDEEKAKQDPSYYLKNTNAETRETLQE
LYKEFKGDEILAATMKAPEKKKVDKLNAAHYSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFVKKKG
YVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPF
KDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTD
RPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATE
QQRKSPQPVPLSPCPRRSPVGVLGTSAPGSSRLPDDH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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