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Report for CCDS46520.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46520.1 Public Homo sapiens 2 OBSL1 24 110 108 CCDS HistoryNCBI Gene:23363Re-query CCDS DB by CCDS ID:46520.1Re-query CCDS DB by GeneID:23363See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46520.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000404537.6 ENSP00000385636.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000404537.6Link to Ensembl Protein Viewer:ENSP00000385636.1Re-query CCDS DB by Nucleotide ID:ENST00000404537Re-query CCDS DB by Protein ID:ENSP00000385636
Original member Current member NCBI NM_015311.3 NP_056126.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015311.3Link to Protein Sequence:NP_056126.1Re-query CCDS DB by Nucleotide ID:NM_015311Re-query CCDS DB by Protein ID:NP_056126Link to BLAST:NP_056126.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056126.1 1896 O75147-3 1896 100% 0 0

Chromosomal Locations for CCDS 46520.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219550835 219550842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219551529 219551798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219552112 219552216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219552536 219552697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219552868 219553024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219553574 219553686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219554474 219554740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219556020 219556292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219556454 219556723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219557343 219557618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219557823 219558110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219558184 219558459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219559225 219559497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219562402 219562674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219563355 219563627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219565242 219565514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219566830 219567126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219567273 219567575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219567718 219567969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219568055 219568324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219570221 219571232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5691 nt):
ATGAAGGCGAGCTCGGGGGATCAGGGGAGCCCCCCGTGCTTCCTGCGCTTCCCGCGGCCTGTGCGGGTGG
TAAGTGGCGCCGAGGCCGAGCTCAAGTGCGTGGTCCTGGGGGAGCCGCCGCCTGTAGTGGTGTGGGAGAA
GGGCGGGCAGCAGCTGGCGGCCTCGGAACGCCTGAGCTTCCCGGCGGACGGCGCGGAGCACGGCCTGCTG
CTGACCGCCGCACTGCCCACCGACGCGGGGGTCTACGTGTGCCGCGCCCGCAACGCGGCCGGCGAGGCCT
ACGCGGCGGCCGCCGTCACCGTGCTGGAGCCGCCGGCCTCCGACCCCGAGCTGCAGCCCGCCGAGCGCCC
GCTGCCATCGCCGGGGTCCGGGGAGGGCGCCCCGGTCTTCCTCACGGGGCCTCGATCCCAGTGGGTGCTG
CGGGGGGCGGAGGTGGTGCTGACGTGCCGGGCGGGGGGCCTCCCCGAGCCCACACTGTACTGGGAGAAGG
ACGGGATGGCCCTGGACGAAGTGTGGGACAGCAGCCACTTCGCGCTCCAGCCGGGCCGCGCCGAGGACGG
CCCCGGCGCGAGCCTGGCACTGCGCATCCTGGCGGCTCGGCTGCCGGATTCCGGCGTCTACGTGTGCCAC
GCCCGCAACGCGCACGGCCACGCGCAGGCGGGGGCGCTGCTCCAGGTGCACCAGCCCCCCGAGAGCCCGC
CCGCGGACCCCGACGAGGCCCCCGCGCCGGTGGTGGAGCCGCTCAAGTGCGCGCCTAAGACCTTCTGGGT
GAACGAGGGCAAGCACGCCAAGTTCCGCTGCTACGTGATGGGCAAGCCCGAGCCCGAGATCGAATGGCAC
TGGGAGGGCCGCCCGCTGCTCCCGGACCGCCGCCGCCTCATGTACCGCGACCGCGACGGCGGCTTCGTGC
TCAAGGTGCTTTACTGCCAGGCCAAGGATCGTGGGCTCTACGTCTGCGCCGCGCGCAACTCGGCGGGCCA
GACGCTCAGTGCCGTGCAGCTGCACGTGAAAGAGCCCCGCCTCCGGTTCACACGGCCCCTGCAGGACGTG
GAGGGCCGTGAGCACGGGATTGCCGTGCTGGAATGTAAAGTACCCAACTCCCGCATCCCCACGGCCTGGT
TCCGTGAGGACCAGCGGCTGCTGCCCTGCCGCAAGTACGAGCAGATCGAAGAGGGCACTGTCCGGCGCCT
CATCATCCACAGGCTGAAGGCAGACGATGATGGTATCTACCTGTGCGAGATGCGGGGCCGGGTGCGCACC
GTGGCCAACGTCACAGTCAAAGGGCCCATCCTGAAGCGCCTGCCCCGGAAGCTCGACGTCCTGGAAGGAG
AGAATGCTGTGCTGCTAGTGGAAACTCTAGAGGCCGGGGTCGAGGGACGCTGGAGCCGTGATGGGGAGGA
GCTGCCGGTCATCTGCCAGAGCAGCTCAGGCCACATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAG
GATGCTGGCGAGGTCACCTTTAGCCTGGGCAACTCCCGTACCACTACGCTTCTCAGAGTAAAATGTGTCA
AGCACAGTCCCCCAGGACCCCCCATATTGGCAGAGATGTTCAAGGGCCACAAGAACACGGTCCTGTTGAC
CTGGAAGCCTCCCGAGCCAGCTCCCGAGACCCCATTCATCTACCGGCTGGAGCGGCAGGAAGTGGGCTCT
GAAGACTGGATTCAGTGCTTCAGCATCGAGAAAGCCGGAGCCGTGGAGGTGCCGGGCGACTGTGTGCCCT
CCGAGGGTGACTACCGCTTCCGCATCTGCACAGTCAGCGGACATGGCCGTAGTCCCCACGTGGTGTTCCA
CGGTTCTGCTCACCTTGTGCCCACAGCTCGCCTGGTGGCAGGTCTGGAGGATGTGCAGGTATACGACGGG
GAAGATGCCGTCTTCTCCCTCGATCTCTCCACCATCATCCAGGGTACCTGGTTCCTTAATGGGGAAGAGC
TCAAGAGTAACGAGCCGGAGGGCCAGGTGGAACCTGGGGCCCTGCGGTACCGTATAGAGCAGAAGGGTCT
GCAGCACAGACTCATCCTGCATGCCGTCAAGCACCAGGACAGCGGTGCCCTGGTCGGCTTCAGCTGCCCC
GGCGTGCAGGACTCAGCTGCCCTCACAATCCAAGAGAGCCCGGTGCACATCCTGAGCCCCCAGGACAGGG
TGTCGTTGACCTTCACAACCTCAGAGCGGGTGGTGCTGACTTGTGAGCTCTCAAGGGTGGACTTCCCGGC
AACCTGGTACAAGGATGGGCAGAAGGTGGAGGAGAGCGAGTTGCTGGTGGTGAAGATGGATGGGCGCAAA
CACCGTCTGATCCTGCCTGAGGCCAAAGTCCAGGACAGTGGCGAGTTTGAGTGCAGGACAGAAGGGGTCT
CGGCCTTCTTCGGCGTCACTGTCCAAGATCCTCCCGTGCACATCGTGGACCCCCGAGAACATGTGTTCGT
GCATGCCATAACTTCCGAGTGTGTCATGCTGGCCTGTGAGGTGGACCGAGAGGACGCCCCTGTGCGTTGG
TACAAGGACGGGCAGGAGGTGGAGGAGAGTGACTTCGTGGTGCTGGAGAATGAGGGGCCCCATCGCCGCC
TGGTGCTGCCCGCCACCCAGCCCTCAGACGGGGGCGAGTTTCAGTGCGTCGCTGGAGATGAGTGTGCCTA
CTTCACTGTCACCATCACAGACGTCTCCTCGTGGATCGTGTATCCCAGCGGCAAGGTGTATGTGGCAGCC
GTGCGCCTGGAGCGTGTGGTGCTGACCTGTGAGCTATGCCGGCCCTGGGCAGAGGTGCGCTGGACCAAGG
ATGGAGAGGAGGTGGTGGAGAGCCCCGCGCTGCTCCTGCAGAAGGAAGACACTGTCCGCCGCCTGGTGCT
GCCCGCTGTCCAGCTCGAGGACTCCGGCGAGTACTTGTGTGAAATTGACGATGAGTCGGCCTCCTTCACT
GTCACCGTCACAGAACCCCCAGTGCGGATCATATACCCTCGCGATGAGGTGACCTTGATCGCCGTGACCT
TGGAGTGTGTGGTGCTGATGTGTGAACTGTCTCGGGAGGATGCCCCTGTGCGCTGGTACAAGGATGGGCT
GGAAGTGGAGGAGAGCGAGGCCCTGGTGCTGGAGAGGGATGGGCCACGCTGCCGCCTGGTGCTACCTGCT
GCTCAGCCCGAGGACGGGGGCGAGTTTGTATGTGATGCTGGAGATGACTCGGCCTTCTTCACTGTCACTG
TCACAGCCCCACCAGAGAGGATTGTGCACCCGGCAGCCCGCTCCCTGGATCTGCATTTTGGGGCTCCAGG
GCGCGTGGAGCTGCGCTGTGAGGTGGCCCCAGCTGGGTCTCAGGTGCGCTGGTACAAGGACGGGCTGGAA
GTGGAGGCATCAGATGCCCTGCAGCTGGGTGCCGAGGGGCCCACCCGCACCCTGACCCTGCCCCACGCCC
AGCCTGAGGACGCCGGGGAGTATGTGTGTGAGACCCGGCATGAGGCCATCACCTTCAATGTCATCCTGGC
TGAGCCTCCAGTGCAGTTCCTTGCTCTAGAGACAACTCCAAGCCCGCTCTGTGTGGCCCCTGGGGAGCCA
GTGGTGCTGAGCTGTGAACTGTCCCGGGCTGGCGCCCCCGTGGTCTGGAGCCACAATGGGAGGCCCGTGC
AGGAGGGCGAGGGCCTAGAGCTCCATGCCGAGGGCCCCCGCCGAGTCCTCTGCATCCAGGCTGCAGGCCC
AGCCCATGCAGGGCTCTACACCTGCCAGTCTGGAGCAGCCCCCGGAGCCCCAAGCCTCAGCTTCACCGTC
CAGGTGGCTGAGCCCCCTGTGCGGGTGGTAGCTCCCGAGGCAGCCCAGACGAGGGTTCGGAGCACCCCAG
GCGGGGACCTAGAGCTGGTGGTGCACCTCTCCGGGCCAGGGGGCCCTGTACGCTGGTACAAGGACGGGGA
GCGACTGGCAAGCCAGGGGCGGGTGCAGCTGGAGCAGGCCGGGGCCAGGCAGGTGCTGCGGGTGCAGGGG
GCACGGAGCGGGGACGCTGGGGAGTACCTGTGCGATGCGCCCCAGGACAGCCGCATCTTCCTTGTCAGCG
TGGAAGAGCCACTGCTGGTGAAGCTGGTCTCGGAGCTGACACCACTCACTGTCCACGAGGGCGATGATGC
CACGTTCCGGTGTGAAGTCTCCCCACCAGATGCCGATGTCACCTGGCTGCGCAATGGGGCCGTCGTCACT
CCAGGGCCCCAGGTGGAGATGGCCCAGAATGGTTCAAGCCGCATCTTAACCTTGCGAGGCTGCCAACTGG
GGGATGCAGGGACCGTGACTTTGCGGGCAGGGAGCACGGCCACAAGTGCCCGGCTCCATGTTCGAGAGAC
AGAGCTGCTGTTCCTACGGCGGTTGCAGGATGTGCGGGCAGAGGAAGGCCAGGATGTGTGTCTCGAAGTG
GAGACAGGCCGAGTGGGTGCAGCGGGGGCCGTGCGCTGGGTGCGAGGTGGGCAGCCCCTGCCCCACGACT
CTCGCCTGTCCATGGCCCAGGATGGGCACATCCACCGCCTCTTCATCCATGGTGTCATACTGGCCGACCA
GGGCACCTACGGCTGCGAGAGCCACCACGATCGCACCCTGGCCAGGCTCAGCGTGAGGCCGAGGCAGCTG
AGGGTGCTGCGGCCTCTGGAGGACGTGACCATCAGTGAGGGGGGCAGTGCCACCTTCCAGCTGGAGCTGT
CCCAGGAAGGTGTGACCGGGGAGTGGGCCCGGGGTGGAGTACAGCTGTATCCAGGACCCAAGTGTCACAT
CCACTCGGACGGCCACCGTCACCGACTGGTACTCAATGGCCTGGGCCTGGCCGACTCAGGCTGTGTCTCC
TTCACAGCGGATTCCCTGCGCTGCGCAGCCAGACTCATTGTGAGAGAGGTCCCAGTGACCATCGTGCGGG
GGCCACACGACCTAGAGGTGACCGAGGGCGACACAGCTACGTTCGAGTGCGAGCTTTCCCAAGCTTTGGC
TGATGTTACCTGGGAGAAGGACGGGAACGCGCTTACGCCTAGCCCGCGGCTCCGGCTCCAGGCCCTCGGC
ACGCGCCGCCTTCTCCAGCTGCGACGCTGCGGCCCCTCGGACGCCGGGACCTACAGCTGCGCGGTGGGGA
CGGCCCGCGCCGGACCGGTCCGCCTGACCGTGCGCGAGCGTACTGTGGCGGTACTCTCCGAGCTGCGGTC
GGTGAGCGCCCGCGAAGGCGACGGCGCTACGTTCGAGTGCACCGTGTCGGAGGTCGAGACCACGGGGCGC
TGGGAGCTCGGAGGCCGCCCGCTGAGACCCGGAGCCCGCGTCCGCATCCGACAGGAAGGGAAGAAACACA
TTCTGGTGCTTAGCGAGCTGCGCGCCGAGGACGCCGGTGAAGTCCGCTTCCAGGCGGGGCCCGCCCAGTC
CCTGGCTCTACTGGAAGTGGAGGCATTGCCTCTCCAGATGTGCCGCCACCCCCCTCGCGAGAAGACCGTT
CTGGTGGGCCGCCGGGCGGTGCTGGAGGTGACTGTGTCCCGCTCGGGGGGCCACGTGTGCTGGCTGCGGG
AGGGGGCCGAGCTGTGCCCGGGAGATAAGTATGAGATGCGCAGCCACGGCCCCACCCACAGCCTGGTCAT
CCATGACGTTCGACCTGAGGACCAAGGCACTTACTGCTGCCAGGCCGGCCAGGACAGCACCCACACACGG
CTGCTGGTAGAGGGCAACTAG

Translation (1896 aa):
MKASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLL
LTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPASDPELQPAERPLPSPGSGEGAPVFLTGPRSQWVL
RGAEVVLTCRAGGLPEPTLYWEKDGMALDEVWDSSHFALQPGRAEDGPGASLALRILAARLPDSGVYVCH
ARNAHGHAQAGALLQVHQPPESPPADPDEAPAPVVEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWH
WEGRPLLPDRRRLMYRDRDGGFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDV
EGREHGIAVLECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGTVRRLIIHRLKADDDGIYLCEMRGRVRT
VANVTVKGPILKRLPRKLDVLEGENAVLLVETLEAGVEGRWSRDGEELPVICQSSSGHMHALVLPGVTRE
DAGEVTFSLGNSRTTTLLRVKCVKHSPPGPPILAEMFKGHKNTVLLTWKPPEPAPETPFIYRLERQEVGS
EDWIQCFSIEKAGAVEVPGDCVPSEGDYRFRICTVSGHGRSPHVVFHGSAHLVPTARLVAGLEDVQVYDG
EDAVFSLDLSTIIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCP
GVQDSAALTIQESPVHILSPQDRVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESELLVVKMDGRK
HRLILPEAKVQDSGEFECRTEGVSAFFGVTVQDPPVHIVDPREHVFVHAITSECVMLACEVDREDAPVRW
YKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECAYFTVTITDVSSWIVYPSGKVYVAA
VRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDDESASFT
VTVTEPPVRIIYPRDEVTLIAVTLECVVLMCELSREDAPVRWYKDGLEVEESEALVLERDGPRCRLVLPA
AQPEDGGEFVCDAGDDSAFFTVTVTAPPERIVHPAARSLDLHFGAPGRVELRCEVAPAGSQVRWYKDGLE
VEASDALQLGAEGPTRTLTLPHAQPEDAGEYVCETRHEAITFNVILAEPPVQFLALETTPSPLCVAPGEP
VVLSCELSRAGAPVVWSHNGRPVQEGEGLELHAEGPRRVLCIQAAGPAHAGLYTCQSGAAPGAPSLSFTV
QVAEPPVRVVAPEAAQTRVRSTPGGDLELVVHLSGPGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQG
ARSGDAGEYLCDAPQDSRIFLVSVEEPLLVKLVSELTPLTVHEGDDATFRCEVSPPDADVTWLRNGAVVT
PGPQVEMAQNGSSRILTLRGCQLGDAGTVTLRAGSTATSARLHVRETELLFLRRLQDVRAEEGQDVCLEV
ETGRVGAAGAVRWVRGGQPLPHDSRLSMAQDGHIHRLFIHGVILADQGTYGCESHHDRTLARLSVRPRQL
RVLRPLEDVTISEGGSATFQLELSQEGVTGEWARGGVQLYPGPKCHIHSDGHRHRLVLNGLGLADSGCVS
FTADSLRCAARLIVREVPVTIVRGPHDLEVTEGDTATFECELSQALADVTWEKDGNALTPSPRLRLQALG
TRRLLQLRRCGPSDAGTYSCAVGTARAGPVRLTVRERTVAVLSELRSVSAREGDGATFECTVSEVETTGR
WELGGRPLRPGARVRIRQEGKKHILVLSELRAEDAGEVRFQAGPAQSLALLEVEALPLQMCRHPPREKTV
LVGRRAVLEVTVSRSGGHVCWLREGAELCPGDKYEMRSHGPTHSLVIHDVRPEDQGTYCCQAGQDSTHTR
LLVEGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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