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Report for CCDS46128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46128.1 Public Homo sapiens 19 BBC3 24 110 108 CCDS HistoryNCBI Gene:27113Re-query CCDS DB by CCDS ID:46128.1Re-query CCDS DB by GeneID:27113See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300880.11 ENSP00000300880.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000300880.11Link to Ensembl Protein Viewer:ENSP00000300880.7Re-query CCDS DB by Nucleotide ID:ENST00000300880Re-query CCDS DB by Protein ID:ENSP00000300880
Original member Current member NCBI NM_001127242.3 NP_001120714.1 Accepted alive Link to Nucleotide Sequence:NM_001127242.3Link to Protein Sequence:NP_001120714.1Re-query CCDS DB by Nucleotide ID:NM_001127242Re-query CCDS DB by Protein ID:NP_001120714Link to BLAST:NP_001120714.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120714.1 101 Q96PG8-1 101 100% 0 0

Chromosomal Locations for CCDS 46128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 47221701 47221918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47232515 47232602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (306 nt):
ATGAAATTTGGCATGGGGTCTGCCCAGGCATGTCCATGCCAGGTGCCCAGGGCTGCTTCCACGACGTGGG
TCCCCTGCCAGATTTGTGAGACAAGAGGAGCAGCAGCGGCACCGCCCCTCACCCTGGAGGGTCCTGTACA
ATCTCATCATGGGACTCCTGCCCTTACCCAGGGGCCACAGAGCCCCCGAGATGGAGCCCAATTAGGTGCC
TGCACCCGCCCGGTGGACGTCAGGGACTCGGGGGGCAGGCCCCTCCCACCTCCTGACACCCTGGCCAGCG
CGGGGGACTTTCTCTGCACCATGTAG

Translation (101 aa):
MKFGMGSAQACPCQVPRAASTTWVPCQICETRGAAAAPPLTLEGPVQSHHGTPALTQGPQSPRDGAQLGA
CTRPVDVRDSGGRPLPPPDTLASAGDFLCTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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