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Report for CCDS46030.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46030.1 Public Homo sapiens 19 ZNF257 24 110 108 CCDS HistoryNCBI Gene:113835Re-query CCDS DB by CCDS ID:46030.1Re-query CCDS DB by GeneID:113835See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46030.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594947.6 ENSP00000470209.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000594947.6Link to Ensembl Protein Viewer:ENSP00000470209.1Re-query CCDS DB by Nucleotide ID:ENST00000594947Re-query CCDS DB by Protein ID:ENSP00000470209
Original member Current member NCBI NM_033468.4 NP_258429.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033468.4Link to Protein Sequence:NP_258429.2Re-query CCDS DB by Nucleotide ID:NM_033468Re-query CCDS DB by Protein ID:NP_258429Link to BLAST:NP_258429.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_258429.2 563 Q9Y2Q1-1 563 100% 0 0

Chromosomal Locations for CCDS 46030.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 22052633 22052635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 22072809 22072935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 22073469 22073564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 22087977 22089442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGGGACCACTGACAATTAGGGATGTGACTGTAGAATTCTCTCTGGAGGAGTGGCATTGCCTGGACACTG
CACAGCAGAATTTATATAGGGATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGT
CTCTAAGCCAGACCTGATCACCTGTCTGGAGCAAGGAAAAGAGCCCTGTAATATGAAGAGACATGAGATG
GTAGCCAAACCCCCAGTTATGTGTTCTCATATTGCTGAAGACCTTTGCCCAGAGCGAGACATAAAATATT
TTTTCCAAAAAGTCATACTGAGGAGATATGATAAATGTGAACATGAGAATTTACAATTAAGAAAGGGCTG
TAAAAGTGTGGATGAGTGTAAGGTGTGCAAAGGAGGTTATAATGGACTTAACCAATGTCTGATAACTACC
CAGAGCAAAATGTATCAATGTGATAAATATGTAAAAGTCTTCTATAAGTTTTCAAATTCAGATAGACATA
AGATAAGACATACTGAAAAGAAAACTTGCAAATGTAAAGAATGTGGCAAATCATTTTGCATGCTTTCACA
ACTAACTCGACATAAGAGAATTCATATTAGAGAGAATTCCCACAAATGTGAAGAATGTGGCAAAGCCTTT
AACCAGTCCTCAGCTCTTACTCGACATAAGATGACTCATACTGGAGAGAAACCCTACAAATGTGAAGAGT
GTGGAAAAGCTTTTAACCGGTCTTCACACCTTACTCAACATAAGGTAATTCATACTAGAGAGAAACCCTA
CAAATGTGAAGAGTGTGGCAAAGCCTTTAACCGGTCTTCACACATTACTCAACATAAGAGAATTCATAAT
AGAGAGAAGCCCTTCAAATATGATGAATGTTGCAAAGCCTTTAAGTGGTCCTCAGCTCTTACTACCCTTA
CTCAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAGTGTGGCAAAGCCTTTAACCA
GTCCTCAGCCCTTACTCGACATAAGATGATTCATACTGGAGAGAAACCCTTCCAATGTGAAGAGTGTGGC
AAAGCTTTTAACCGGTCTTCACACCTTACTCAACATAAGATAATTCATACTAAAGAGAAACCCTACAAAT
GTGAAGAGTGTGGAAAAGCCTTTAACCGGTCTTCACACCTTACTAAACATAAGAGAATTCATACTAGAGA
GAAGGCCTACAAATGTGATGAATATTGCAAAGCTTTTAACTGGTCCTCAGCTCTTACTACCCTTACTCAG
CATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAGTGTGGCAAAGCCTTTAACCGGTCTT
CATACCTTATTCGACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAGTGTGGCAAAGC
CTTTAACCAGTCTTCACACCTTACTCAACATAAAATAATTCATACTGGGGAGAAGCCCTACAAATGTGAA
GAATGTGGCAAAGCCTTTAACCGGTCTTCACACCTTTCTCAACATAAGATAATTCATACTGGAGAGAAAC
CCTACAAATGTGAAGAATGTGGCAAGCCTTTTAATCGTTTCTCATACCTTACCGTACATAAGAGAATTCA
TGCTGGAGAGAACCCCAACAAATATGAAGAATGTGGCAAAGCTTGTAACCATTCCTCAAACCTTACTAAA
CATAATTCATAA

Translation (563 aa):
MGPLTIRDVTVEFSLEEWHCLDTAQQNLYRDVMLENYRNLVFLGIAVSKPDLITCLEQGKEPCNMKRHEM
VAKPPVMCSHIAEDLCPERDIKYFFQKVILRRYDKCEHENLQLRKGCKSVDECKVCKGGYNGLNQCLITT
QSKMYQCDKYVKVFYKFSNSDRHKIRHTEKKTCKCKECGKSFCMLSQLTRHKRIHIRENSHKCEECGKAF
NQSSALTRHKMTHTGEKPYKCEECGKAFNRSSHLTQHKVIHTREKPYKCEECGKAFNRSSHITQHKRIHN
REKPFKYDECCKAFKWSSALTTLTQHKRIHTGEKPYKCEECGKAFNQSSALTRHKMIHTGEKPFQCEECG
KAFNRSSHLTQHKIIHTKEKPYKCEECGKAFNRSSHLTKHKRIHTREKAYKCDEYCKAFNWSSALTTLTQ
HKIIHTGEKPYKCEECGKAFNRSSYLIRHKIIHTGEKPYKCEECGKAFNQSSHLTQHKIIHTGEKPYKCE
ECGKAFNRSSHLSQHKIIHTGEKPYKCEECGKPFNRFSYLTVHKRIHAGENPNKYEECGKACNHSSNLTK
HNS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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