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Report for CCDS45786.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45786.1 Public Homo sapiens 17 MXRA7 24 110 108 CCDS HistoryNCBI Gene:439921Re-query CCDS DB by CCDS ID:45786.1Re-query CCDS DB by GeneID:439921See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45786.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000449428.7 ENSP00000391466.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000449428.7Link to Ensembl Protein Viewer:ENSP00000391466.1Re-query CCDS DB by Nucleotide ID:ENST00000449428Re-query CCDS DB by Protein ID:ENSP00000391466
Original member Current member NCBI NM_198530.4 NP_940932.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198530.4Link to Protein Sequence:NP_940932.2Re-query CCDS DB by Nucleotide ID:NM_198530Re-query CCDS DB by Protein ID:NP_940932Link to BLAST:NP_940932.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940932.2 170 P84157-2 170 100% 0 0

Chromosomal Locations for CCDS 45786.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 76680867 76680879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76685072 76685165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76688113 76688176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76710605 76710946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGGAGGCGCCGGCCGAGCTACTGGCCGCGCTGCCTGCGCTGGCCACCGCGCTGGCCCTTCTGCTCGCCT
GGCTACTGGTGCGGCGTGGGGCGGCCGCGAGCCCGGAGCCTGCCCGCGCGCCCCCGGAACCCGCGCCCCC
GGCCGAGGCCACCGGGGCCCCGGCGCCGTCCCGCCCCTGCGCCCCCGAGCCGGCGGCCTCGCCCGCGGGG
CCGGAGGAGCCTGGAGAGCCCGCGGGGCTGGGGGAGCTCGGGGAGCCTGCGGGACCGGGGGAGCCCGAAG
GGCCAGGGGATCCCGCGGCGGCGCCAGCGGAGGCGGAGGAGCAGGCGGTGGAGGCGAGGCAGGAAGAGGA
GCAGGACTTGGATGGTGAGAAGGGGCCATCATCGGAAGGGCCTGAGGAGGAGGACGGAGAAGGCTTCTCC
TTCAAATACAGCCCCGGGAAGCTGAGGGGAAACCAGTACAAGAAGATGATGACCAAAGAGGAGCTGGAGG
AGGAGCAGAGAACTGAAGAATAA

Translation (170 aa):
MEAPAELLAALPALATALALLLAWLLVRRGAAASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAASPAG
PEEPGEPAGLGELGEPAGPGEPEGPGDPAAAPAEAEEQAVEARQEEEQDLDGEKGPSSEGPEEEDGEGFS
FKYSPGKLRGNQYKKMMTKEELEEEQRTEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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