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Report for CCDS45611.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45611.1 Public Homo sapiens 17 GAS7 24 110 108 CCDS HistoryNCBI Gene:8522Re-query CCDS DB by CCDS ID:45611.1Re-query CCDS DB by GeneID:8522See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45611.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000580865.5 ENSP00000463873.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000580865.5Link to Ensembl Protein Viewer:ENSP00000463873.1Re-query CCDS DB by Nucleotide ID:ENST00000580865Re-query CCDS DB by Protein ID:ENSP00000463873
Original member Current member NCBI NM_003644.3 NP_003635.2 Accepted alive Link to Nucleotide Sequence:NM_003644.3Link to Protein Sequence:NP_003635.2Re-query CCDS DB by Nucleotide ID:NM_003644Re-query CCDS DB by Protein ID:NP_003635Link to BLAST:NP_003635.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003635.2 336 O60861-2 336 100% 0 0

Chromosomal Locations for CCDS 45611.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 9917228 9917341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9918001 9918099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9919626 9919705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9925476 9925599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9926641 9926769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9934166 9934244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9940126 9940200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9943121 9943236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9946894 9946983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9959202 9959306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1011 nt):
ATGTCCAATATGGAGAACAGCTTTGACGATGTTTCTTGCCTCTCTCCCCAGAACCTGGGATCCTCATCGC
CAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTGTGTGACGTTCCCTCACCCAGACACGAT
GCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGATAAGAAGGAC
CCCCAAGGCAACGGCACCGTGGCTGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGGCAAACAAATGC
AGAAGGAAATGTCAGAATTCATCCGGGAAAGGATAAAGATTGAAGAAGACTATGCGAAGAACTTAGCTAA
GCTCTCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCCTTGGGAGAGGCGTGGGCCCAGGTGAAGAAG
AGCCTGGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGCTTCACAGCGAGGTGGAGAAGCCCC
TGATGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAAGTGCGACCACCACATTGCCGACCTTCGCAA
GCAGCTCGCCAGCCGCTATGCCTCGGTGGAGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAGACCTG
GAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGA
GAAAGTCCACACAGGCTGGAGACGACCTCATGCGCTGTGTGGATCTCTACAACCAGGCCCAGTCCAAATG
GTTTGAAGAGATGGTGACCACCACATTGGAGCTAGAGCGGCTGGAGGTGGAGAGGGTAGAGATGATCCGG
CAGCACCTGTGCCAGTACACGCAGCTGCGGCATGAAACAGACATGTTCAACCAAAGCACAGTCGAGCCCG
TGGATCAGCTGCTTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGGG
CAACATCCGCCCTGTGGACATGGAGATCTAG

Translation (336 aa):
MSNMENSFDDVSCLSPQNLGSSSPSKKQSKENTITINCVTFPHPDTMPEQQLLKPTEWSYCDYFWADKKD
PQGNGTVAGFELLLQKQLKGKQMQKEMSEFIRERIKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKK
SLADEAEVHLKFSAKLHSEVEKPLMNFRENFKKDMKKCDHHIADLRKQLASRYASVEKARKALTERQRDL
EMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTTTLELERLEVERVEMIR
QHLCQYTQLRHETDMFNQSTVEPVDQLLRKVDPAKDRELWVREHKTGNIRPVDMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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