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Report for CCDS45582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45582.1 Public Homo sapiens 17 GGT6 24 110 108 CCDS HistoryNCBI Gene:124975Re-query CCDS DB by CCDS ID:45582.1Re-query CCDS DB by GeneID:124975See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000574154.5 ENSP00000458307.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574154.5Link to Ensembl Protein Viewer:ENSP00000458307.1Re-query CCDS DB by Nucleotide ID:ENST00000574154Re-query CCDS DB by Protein ID:ENSP00000458307
Original member Current member NCBI NM_001122890.3 NP_001116362.1 Accepted alive Link to Nucleotide Sequence:NM_001122890.3Link to Protein Sequence:NP_001116362.1Re-query CCDS DB by Nucleotide ID:NM_001122890Re-query CCDS DB by Protein ID:NP_001116362Link to BLAST:NP_001116362.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001116362.1 493 Q6P531-1 493 100% 0 0

Chromosomal Locations for CCDS 45582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4558015 4559057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4559343 4559438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4559558 4559760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4560382 4560521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGGAGCGGGCAGAAGAGCCCGTGGTCTATCAGAAGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGG
AG
GAAGTGGAGGAGGAGGAGACATCAGAGGCGCTGGTTCTAAACCCCCGGAGGCACCAGGACTCTTCCAG
G
AACAAGGCTGGCGGGCTGCCCGGAACCTGGGCCCGTGTAGTGGCAGCCCTGCTGCTGCTGGCTGTTGGC
TGC
TCCCTGGCTGTGAGGCAGCTCCAGAATCAGGGCAGGTCGACAGGAAGCTTGGGCTCTGTGGCCCCTC
CA
CCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGGCCGAGA
G
CTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCCTGGCAGTGGTGCAT
CCT
CATGCCACGGGGCTAGGTGCCATGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGGCAATTCCACGG
CC
CTGACATCAGGCCCAGCACAGACCCTGGCCCCCGGCCTGGGGCTGCCCGCGGCTCTGCCCACCCTGCA
C
CTGCTGCATGCACGCTTCGGCCGCCTGCCCTGGCCACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAG
GAG
GGCTTCCTGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCTCGGGGCACAGAAGGCCTCTGTCCAC
TA
CTTTGCCATGCTGATGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGT
G
CTTCGCAGCGCAGCCCTCGCTCCCACCTCAGACCTTGCTGGGGATGCTCTACTGAGTCTACTGGCGGGA
GAC
CTGGGGGTGGAGGTGCCCTCGGCTGTGCCCAGGCCCACTTTGGAACCAGCAGAGCAGCTACCTGTGC
CC
CAGGGCATCCTGTTCACCACCCCCAGTCCCTCAGCTGGCCCAGAACTGCTGGCACTGTTGGAGGCAGC
C
CTGCGCTCCGGGGCGCCCATCCCTGACCCCTGCCCACCGTTCCTGCAGACTGCTGTGAGCCCCGAGAGC
AGT
GCCCTGGCCGCCGTGGACAGCAGCGGCTCTGTGCTCCTTCTCACCTCCTCGCTCAACTGCTCCTTTG
GC
TCTGCACACCTGTCCCCAAGCACTGGGGTTCTGCTCAGCAACCTGGTGGCCAAGTCTACCACTAGTGC
C
TGGGCCTGCCCCCTCATCCTCCGTGGCAGCCTGGATGACACAGAGGCTGATGTGTTGGGGCTTGTGGCT
TCA
GGGACCCCTGATGTGGCCAGGGCCATGACTCACACCCTACTCAGGCATCTGGCAGCAAGGCCCCCTA
CC
CAGGCCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGAC
C
CTGCTCCAGGTGGCAGCCCACACAGAGCACGCCCATGTCTCCAGTGTCCCCCATGCCTGCTGCCCCTTC
CAG
GGGTTCTAA


Translation (493 aa):
MERAEEPVVYQKLLPWEPSLESEEEVEEEETSEALVLNPRRHQDSSRNKAGGLPGTWARVVAALLLLAVG
C
SLAVRQLQNQGRSTGSLGSVAPPPGGHSHGPGVYHHGAIISPA
GRELLVAGGNVVDAGVGAALCLAVVH
P
HATGL
GAMFWGLFHDSSSGNSTALTSGPAQTLAPGLGLPAALPTLHLLHARFGRLPWPRLLVGPTTLAQ
E
GFLVDTPLARALVARGTEGLCPLLCHADGTPLGAGARATNPQLAAVLRSAALAPTSDLAGDALLSLLAG
D
LGVEVPSAVPRPTLEPAEQLPVPQGILFTTPSPSAGPELLALLEAALRSGAPIPDPCPPFLQTAVSPES
S
ALAAVDSSGSVLLLTSSLNCSFGSAHLSPSTGVLLSNLVAKSTTSAWACPLILRGSLDDTEADVLGLVA
S
GTPDVARAMTHTLLRHLAARPPTQAQHQHQGQQEPTEHPSTCGQGTLLQVAAHTEHAHVSSVPHACCPF
Q
GF




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 Genome Browser Links:   Ensembl Genome Browser
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