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Report for CCDS44263.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44263.1 Public Homo sapiens 1 SDHC 24 110 108 CCDS HistoryNCBI Gene:6391Re-query CCDS DB by CCDS ID:44263.1Re-query CCDS DB by GeneID:6391See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44263.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432287.6 ENSP00000390558.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432287.6Link to Ensembl Protein Viewer:ENSP00000390558.2Re-query CCDS DB by Nucleotide ID:ENST00000432287Re-query CCDS DB by Protein ID:ENSP00000390558
Original member NCBI NM_001035512.2 NP_001030589.1 Updated not alive Link to Nucleotide Sequence:NM_001035512.2Link to Protein Sequence:NP_001030589.1Re-query CCDS DB by Nucleotide ID:NM_001035512Re-query CCDS DB by Protein ID:NP_001030589
Current member NCBI NM_001035512.3 NP_001030589.1 Accepted alive Link to Nucleotide Sequence:NM_001035512.3Link to Protein Sequence:NP_001030589.1Re-query CCDS DB by Nucleotide ID:NM_001035512Re-query CCDS DB by Protein ID:NP_001030589Link to BLAST:NP_001030589.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001030589.1 135 Q99643-3 135 100% 0 0

Chromosomal Locations for CCDS 44263.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 161314406 161314425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161323614 161323670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161340594 161340655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161356677 161356840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161362329 161362433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (408 nt):
ATGGCTGCGCTGTTGCTGAGACACGTTGGTCGTCATTGCCTCCGAGCCCACTTTAGCCCTCAGCTCTGTA
TCAGAAATTGGTCTCTTCCCATGGCGATGTCCATCTGCCACCGTGGCACTGGTATTGCTTTGAGTGCAGG
GGTCTCTCTTTTTGGCATGTCGGCCCTGTTACTCCCTGGGAACTTTGAGTCTTATTTGGAACTTGTGAAG
TCCCTGTGTCTGGGGCCAGCACTGATCCACACAGCTAAGTTTGCACTTGTCTTCCCTCTCATGTATCATA
CCTGGAATGGGATCCGACACTTGATGTGGGACCTAGGAAAAGGCCTGAAGATTCCCCAGCTATACCAGTC
TGGAGTGGTTGTCCTGGTTCTTACTGTGTTGTCCTCTATGGGGCTGGCAGCCATGTGA

Translation (135 aa):
MAALLLRHVGRHCLRAHFSPQLCIRNWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVK
SLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSGVVVLVLTVLSSMGLAAM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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