NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS43603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43603.1 Public Homo sapiens 7 RHBDD2 24 110 108 CCDS HistoryNCBI Gene:57414Re-query CCDS DB by CCDS ID:43603.1Re-query CCDS DB by GeneID:57414See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43603.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318622.8 ENSP00000314144.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000318622.8Link to Ensembl Protein Viewer:ENSP00000314144.4Re-query CCDS DB by Nucleotide ID:ENST00000318622Re-query CCDS DB by Protein ID:ENSP00000314144
Original member Current member EBI ENST00000428119.1 ENSP00000391232.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428119.1Link to Ensembl Protein Viewer:ENSP00000391232.1Re-query CCDS DB by Nucleotide ID:ENST00000428119Re-query CCDS DB by Protein ID:ENSP00000391232
Original member Current member NCBI NM_001040457.3 NP_001035547.1 Accepted alive Link to Nucleotide Sequence:NM_001040457.3Link to Protein Sequence:NP_001035547.1Re-query CCDS DB by Nucleotide ID:NM_001040457Re-query CCDS DB by Protein ID:NP_001035547Link to BLAST:NP_001035547.1
Original member Current member NCBI NM_001346186.2 NP_001333115.1 Accepted alive Link to Nucleotide Sequence:NM_001346186.2Link to Protein Sequence:NP_001333115.1Re-query CCDS DB by Nucleotide ID:NM_001346186Re-query CCDS DB by Protein ID:NP_001333115Link to BLAST:NP_001333115.1
Original member Current member NCBI NM_001346187.2 NP_001333116.1 Accepted alive Link to Nucleotide Sequence:NM_001346187.2Link to Protein Sequence:NP_001333116.1Re-query CCDS DB by Nucleotide ID:NM_001346187Re-query CCDS DB by Protein ID:NP_001333116Link to BLAST:NP_001333116.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035547.1 223 Q6NTF9-3 223 100% 0 0
NP_001333115.1 223 Q6NTF9-3 223 100% 0 0
NP_001333116.1 223 Q6NTF9-3 223 100% 0 0

Chromosomal Locations for CCDS 43603.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 75882074 75882236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75883698 75883848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75887992 75888349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGCTGGGAGTCACCACCGTCCGTTCTCGGATGAGGCGGGCCCTGGTGTTTGGCATGGTTGTGCCCTCAG
TCCTGGTTCCGTGGCTCCTGCTGGGTGCCTCGTGGCTCATTCCCCAGACCTCTTTCCTCAGTAATGTCTG
CGGGCTGTCCATCGGGCTGGCCTATGGCCTCACCTACTGCTATTCCATCGACCTCTCAGAGCGAGTGGCA
CTGAAGCTCGATCAGACCTTCCCCTTCAGCCTGATGAGGAGGATATCCGTGTTCAAGTACGTCTCAGGGT
CTTCAGCCGAGAGGAGGGCAGCCCAGAGCCGGAAACTGAACCCGGTGCCTGGCTCCTACCCCACACAGAG
CTGCCACCCTCACCTGTCCCCAAGCCACCCTGTGTCCCAGACGCAGCACGCCAGTGGTCAGAAGCTGGCC
TCCTGGCCCTCCTGCACCCCCGGGCACATGCCCACCTTGCCTCCGTACCAGCCTGCCTCCGGCCTGTGCT
ATGTGCAGAACCACTTTGGTCCAAACCCCACCTCCTCCAGTGTCTACCCAGCTTCTGCGGGCACCTCCCT
GGGCATCCAGCCCCCCACGCCTGTGAACAGCCCTGGCACGGTGTATTCTGGGGCCTTGGGCACACCAGGG
GCTGCAGGCTCCAAGGAGTCCTCCAGGGTCCCCATGCCCTGA

Translation (223 aa):
MLGVTTVRSRMRRALVFGMVVPSVLVPWLLLGASWLIPQTSFLSNVCGLSIGLAYGLTYCYSIDLSERVA
LKLDQTFPFSLMRRISVFKYVSGSSAERRAAQSRKLNPVPGSYPTQSCHPHLSPSHPVSQTQHASGQKLA
SWPSCTPGHMPTLPPYQPASGLCYVQNHFGPNPTSSSVYPASAGTSLGIQPPTPVNSPGTVYSGALGTPG
AAGSKESSRVPMP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH