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Report for CCDS43576.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43576.1 Public Homo sapiens 7 ZMIZ2 24 110 108 CCDS HistoryNCBI Gene:83637Re-query CCDS DB by CCDS ID:43576.1Re-query CCDS DB by GeneID:83637See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43576.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309315.9 ENSP00000311778.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309315.9Link to Ensembl Protein Viewer:ENSP00000311778.4Re-query CCDS DB by Nucleotide ID:ENST00000309315Re-query CCDS DB by Protein ID:ENSP00000311778
Original member Current member EBI ENST00000441627.5 ENSP00000414723.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441627.5Link to Ensembl Protein Viewer:ENSP00000414723.1Re-query CCDS DB by Nucleotide ID:ENST00000441627Re-query CCDS DB by Protein ID:ENSP00000414723
Original member Current member NCBI NM_031449.4 NP_113637.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031449.4Link to Protein Sequence:NP_113637.3Re-query CCDS DB by Nucleotide ID:NM_031449Re-query CCDS DB by Protein ID:NP_113637Link to BLAST:NP_113637.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113637.3 920 Q8NF64-1 920 100% 0 0

Chromosomal Locations for CCDS 43576.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44756250 44756299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44756425 44756539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44756947 44757149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44757378 44757561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44757848 44758108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44759281 44759460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44760151 44760228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44760425 44760593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44761449 44761593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44761695 44761905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44762881 44762986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44763256 44763413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44764419 44764486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44764941 44765009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44765335 44765579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44766164 44766333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44766421 44766663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44767516 44767623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2763 nt):
ATGAACTCCATGAACCCCATGAAACCTGCCCTGCCCCCTGCGCCACACGGTGATGGTTCATTCGCATATG
AGTCTGTGCCTTGGCAACAAAGCGCCACTCAGCCGGCTGGATCGCTGTCTGTGGTCACTACTGTGTGGGG
AGTTGGCAACGCGACACAGAGCCAGGTTTTGGGGAACCCCATGGGCCCTGCAGGGAGTCCCTCTGGCAGC
TCCATGATGCCTGGTGTGGCAGGGGGCAGCTCCGCCTTGACCTCCCCACAGTGCCTGGGACAGCAGGCGT
TTGCTGAAGGCGGCGCCAACAAGGGCTACGTGCAGCAAGGCGTGTACAGCCGCGGGGGCTACCCTGGGGC
CCCCGGCTTCACCACCGGGTATGCAGGCGGCCCGGGGGGCCTGGGCCTCCCCTCACATGCTGCAAGACCC
TCCACTGACTTCACGCAAGCGGCAGCTGCTGCAGCTGTGGCTGCTGCGGCAGCCACTGCCACCGCCACAG
CCACAGCCACCGTGGCTGCTCTCCAGGAGAAGCAGAGCCAGGAGCTGAGCCAGTATGGAGCGATGGGGGC
CGGACAGTCTTTTAACAGCCAGTTTCTGCAGCATGGAGGTCCCCGGGGGCCTAGTGTCCCCGCTGGCATG
AACCCTACTGGCATAGGAGGGGTAATGGGCCCCTCTGGCCTCTCCCCCTTGGCTATGAACCCCACCCGGG
CAGCAGGAATGACACCCTTGTATGCAGGGCAGCGTCTGCCCCAACATGGGTATCCTGGGCCTCCCCAGGC
CCAGCCACTGCCCCGACAGGGGGTCAAGAGAACCTACTCTGAGGTGTATCCAGGGCAGCAGTATCTGCAA
GGAGGCCAGTATGCACCCAGCACCGCCCAGTTTGCGCCCAGCCCTGGGCAGCCCCCTGCCCCCTCCCCTT
CCTACCCTGGGCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTCCCTGTCCGTGCCTGGCCCCACGGG
ACTGCATTATAAGCCCACAGAGCAGTTCAACGGGCAGGGCGCCAGCTTCAACGGGGGCAGCGTCAGCTAC
AGCCAACCTGGCCTGAGTGGGCCTACCCGTTCCATCCCGGGCTATCCCAGTTCCCCACTGCCAGGGAACC
CCACGCCACCCATGACCCCAAGCAGCAGCGTCCCTTACATGTCACCAAACCAAGAGGTCAAGTCTCCCTT
CTTGCCTGATCTCAAGCCCAACCTCAACTCCTTGCACTCATCGCCCTCTGGAAGCGGGCCTTGTGACGAG
TTGCGGCTGACCTTCCCTGTGCGCGATGGGGTGGTCCTGGAGCCCTTCCGCCTGCAGCACAACCTGGCTG
TAAGCAACCATGTCTTCCAGCTGCGAGACTCAGTCTACAAGACCCTGATAATGAGGCCTGACCTGGAGCT
GCAATTCAAGTGCTACCACCACGAGGACCGGCAGATGAACACCAACTGGCCAGCCTCGGTGCAGGTCAGC
GTCAATGCCACGCCGCTCACCATCGAGCGTGGCGACAACAAGACCTCGCACAAGCCACTCTACCTGAAGC
ATGTGTGCCAGCCAGGCCGCAACACCATCCAGATCACCGTCACCGCCTGCTGCTGCTCCCACCTCTTCGT
GCTGCAGCTAGTGCACCGCCCATCCGTCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCTGCCT
GCTGAGCACTGCATCACCAAGATAAAGCGGAACTTCAGCAGCGGCACCATCCCTGGCACCCCTGGGCCCA
ACGGAGAGGACGGGGTGGAGCAGACAGCTATCAAGGTGTCCCTGAAGTGCCCCATCACCTTCCGCAGGAT
CCAGCTCCCTGCCCGAGGTCATGACTGTCGCCACATACAGTGCTTTGACCTGGAGTCGTACCTGCAGCTC
AACTGTGAGCGGGGGACTTGGAGGTGTCCTGTGTGCAACAAGACAGCTTTGCTGGAGGGCCTGGAGGTGG
ACCAGTACATGCTGGGCATCCTGATTTACATTCAGAACTCTGACTATGAGGAGATCACCATCGACCCCAC
GTGCAGCTGGAAGCCAGTGCCCGTGAAGCCTGACATGCACATCAAGGAGGAGCCGGATGGGCCAGCACTG
AAGCGCTGCCGCACCGTGAGCCCCGCCCACGTGCTCATGCCCAGCGTGATGGAGATGATCGCCGCCCTGG
GCCCCGGCGCTGCCCCCTTTGCCCCCCTGCAGCCCCCCTCAGTCCCTGCCCCCAGCGACTACCCTGGCCA
GGGTTCCAGCTTCCTGGGGCCTGGAACTTTCCCTGAGTCCTTCCCACCCACCACGCCCAGCACCCCAACC
CTTGCTGAGTTCACCCCGGGACCACCCCCCATCTCCTACCAGTCTGACATTCCCAGCAGCCTCCTGACTT
CAGAGAAGTCTACCGCCTGCCTCCCAAGCCAGATGGCACCAGCAGGTCACCTGGACCCCACTCACAATCC
TGGGACACCAGGACTACACACCTCCAACCTTGGGGCCCCTCCAGGTCCCCAGCTGCACCATTCAAACCCT
CCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCGAGCTTAGGACCTACGGGTGAACTGGCCTTCAGTCCTG
CCACAGGCGTGATGGGGCCCCCCAGCATGTCTGGAGCCGGGGAGGCCCCAGAACCAGCTCTGGACCTGCT
CCCGGAACTGACCAACCCTGATGAGCTACTGTCCTACTTGGGCCCACCCGACCTCCCTACGAACAACAAT
GACGACCTGCTTTCTCTGTTTGAGAACAACTGA

Translation (920 aa):
MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGSPSGS
SMMPGVAGGSSALTSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGFTTGYAGGPGGLGLPSHAARP
STDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNSQFLQHGGPRGPSVPAGM
NPTGIGGVMGPSGLSPLAMNPTRAAGMTPLYAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQ
GGQYAPSTAQFAPSPGQPPAPSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSY
SQPGLSGPTRSIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSSPSGSGPCDE
LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVS
VNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLP
AEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQL
NCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPAL
KRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPT
LAEFTPGPPPISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNP
PPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNN
DDLLSLFENN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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