CCDS Report for Consensus CDS

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Report for CCDS43500.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
43500.1	Public	Homo sapiens	6	FAM184A	24	110	108

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43500.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000352896.9	ENSP00000326608.6		Accepted	alive
		NCBI	NM_001100411.3	NP_001093881.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001093881.1	971	Q8NB25-4	971	100%	0	0

Chromosomal Locations for CCDS 43500.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)

Genome Browser links:

Chromosome	Start	Stop
6	118960103	118960184
6	118961761	118961963
6	118964667	118964771
6	118966835	118966952
6	118975024	118975208
6	118975917	118976044
6	118979365	118979518
6	118980138	118980350
6	119002899	119003049
6	119003501	119003622
6	119006447	119006608
6	119011309	119011431
6	119016747	119016944
6	119019978	119020159
6	119022945	119023080
6	119023959	119024612

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2916 nt):
ATGAAGCAGCAGGCTTTGACAGAATTTGAAGCTTATAAGCACAGAGTTGAGGACATGCAACTTTGTGCAG AAGCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGAAGAGATTAGAAGGAAATTTGAAGA AAAATTACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAAGACAAACGATTGGCATTGGAAGACTTG CAAGCTGCTCACAGACGGGAGATACAAGAGCTATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAATA AAGGCCAGGAAAAGGCAGAGGAACTACACAGAATGGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT AAGACTTGAACGGAAGAAACTAATTGAGGATTATGAAGGCAAGTTGAATAAAGCTCAGTCCTTTTATGAA CGTGAGCTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCAGAAAGCCTACAGGCCAGCAAAGAAAAGG AAGCTGATCTTAGAAAAGAATTTCAGGGACAAGAAGCAATTTTACGAAAAACTATAGGAAAATTAAAGAC AGAGTTACAGATGGTACAGGATGAAGCTGGAAGTCTTCTTGACAAATGCCAAAAGCTTCAGACGGCACTT GCCATAGCAGAGAACAATGTTCAGGTTCTTCAAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGCCC TATTAAGCAAGCACAAAGAAGTGGAAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAACAGCAAGCTTC AGATCTTGTCCTCAAAGCTAGTCATATTGGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTTACAATT AAAGATTTAGAATCAGAAAAATCGAGAGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAGAGCTTTTT TGCGAAGCAAAACCCAAAGTCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACTGGAGAAGAAAGTAAA TGAAGCAAAGAGAACTCAGCAAGAATATTATGAAAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG GAGGTGACTCAATTAAACGAGGCCCATTCTAAGACTTTGGAAGAATTAGCTTGGAAGCACCATATGGCAA TTGAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAAAAACTGCAAATGGATTTGGAAGAACAACATAA CAAAGATAAACTAAACCTGGAAGAGGATAAAAATCAGCTTCAACAAGAGCTAGAAAACCTAAAGGAAGTA CTGGAAGACAAGTTGAATACAGCCAATCAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAAAGTGAAC AAGGTCTTGGCTCTGCAGAAGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAGGCTTCAGAATGAGCT TGACTTGACTAAAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAAATGTGGAGGGTGAGCTAGAACAA GAAAGGCAACAGCATGAAGAAACAATTGCTGCCATGAAAGAAGAAGAGAAGCTCAAAGTGGACAAAATGG CCCATGACTTAGAAATTAAGTGGACTGAAAATCTTAGACAAGAGTGTTCTAAACTTCGTGAAGAGTTAAG GCTTCAACATGAAGAGGATAAGAAGTCAGCAATGTCTCAACTTTTGCAGTTGAAAGATCGAGAGAAAAAT GCAGCAAGAGATTCATGGCAGAAGAAAGTAGAAGATCTCTTAAACCAGATTTCCTTGCTGAAACAGAATC TGGAGATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACGACA GCGGCTTACGCAAGAGCTTGAAGAATTAGAGGAGCAACATCAGCAAAGACACAAATCATTAAAAGAAGCA CATGTCCTTGCATTTCAAACTATGGAAGAGGAAAAGGAAAAGGAGCAAAGAGCTCTTGAAAATCATTTAC AACAGAAGCATTCTGCAGAGCTTCAATCACTAAAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGGAT AGAAATGGAACAGGAACTTCAGACTCTTCGGTTTGAATTAGAAGATGAAGGAAAGGCTATGCTTGCTTCC TTGCGCTCAGAACTCAACCATCAACATGCAGCTGCAATTGATTTGTTACGGCATAATCATCATCAAGAAT TGGCAGCTGCTAAAATGGAATTAGAGAGAAGCATAGACATCAGCAGAAGACAGAGTAAGGAGCACATATG TAGAATTACAGATCTACAAGAGGAATTAAGACACAGAGAGCATCACATCTCTGAATTGGATAAGGAGGTT CAGCACCTTCATGAGAATATAAGTGCCCTAACCAAAGAACTGGAATTTAAGGGGAAAGAAATTCTCAGAA TACGAAGTGAATCTAACCAACAGATAAGATTAGAAGAAATGGAAGAAAAATATCTAATGAGAGAATCAAA ACCAGAAGATATACAGATGATTACAGAATTAAAAGCCATGCTTACAGAAAGAGACCAGATCATAAAGAAA CTAATTGAGGATAATAAGTTTTATCAGCTGGAATTAGTCAATCGAGAAACTAACTTCAACAAAGTGTTTA ACTCAAGTCCTACTGTTGGTGTTATTAATCCATTGGCTAAGCAAAAGAAGAAGAATGATAAATCACCAAC AAACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTCTGGAATCTGGTGGAGTGGGCAATGGACATCCTAAC CGCCTGGATCCCATTCCTAATTCTCCAGTCCACGATATTGAGTTCAACAGCAGCAAACCACTTCCACAGC CAGTGCCACCTAAAGGGCCCAAGACATTTTTGAGTCCTGCTCAGAGTGAAGCTTCTCCAGTGGCTTCTCC AGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATTCTGA
Translation (971 aa):
MKQQALTEFEAYKHRVEDMQLCAEAQHVQRIVTMSREVEEIRRKFEEKLRSFGQLQVQFEKDKRLALEDL QAAHRREIQELLKSQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRLERKKLIEDYEGKLNKAQSFYE RELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTAL AIAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQEVTI KDLESEKSRVNERLSQLEEERAFLRSKTQSLDEEQKQQILELEKKVNEAKRTQQEYYERELKNLQSRLEE EVTQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMDLEEQHNKDKLNLEEDKNQLQQELENLKEV LEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDALLNVEGELEQ ERQQHEETIAAMKEEEKLKVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQLKDREKN AARDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEA HVLAFQTMEEEKEKEQRALENHLQQKHSAELQSLKDAHRESMEGFRIEMEQELQTLRFELEDEGKAMLAS LRSELNHQHAAAIDLLRHNHHQELAAAKMELERSIDISRRQSKEHICRITDLQEELRHREHHISELDKEV QHLHENISALTKELEFKGKEILRIRSESNQQIRLEEMEEKYLMRESKPEDIQMITELKAMLTERDQIIKK LIEDNKFYQLELVNRETNFNKVFNSSPTVGVINPLAKQKKKNDKSPTNRFVSVPNLSALESGGVGNGHPN RLDPIPNSPVHDIEFNSSKPLPQPVPPKGPKTFLSPAQSEASPVASPDPQRQEWFARYFTF

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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