NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS43310.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43310.1 Public Homo sapiens 5 NUP155 24 110 108 CCDS HistoryNCBI Gene:9631Re-query CCDS DB by CCDS ID:43310.1Re-query CCDS DB by GeneID:9631See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43310.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381843.6 ENSP00000371265.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381843.6Link to Ensembl Protein Viewer:ENSP00000371265.2Re-query CCDS DB by Nucleotide ID:ENST00000381843Re-query CCDS DB by Protein ID:ENSP00000371265
Original member Current member NCBI NM_004298.4 NP_004289.1 Accepted alive Link to Nucleotide Sequence:NM_004298.4Link to Protein Sequence:NP_004289.1Re-query CCDS DB by Nucleotide ID:NM_004298Re-query CCDS DB by Protein ID:NP_004289Link to BLAST:NP_004289.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004289.1 1332 O75694-2 1332 100% 0 0

Chromosomal Locations for CCDS 43310.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 37291900 37292038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37292879 37292985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37294329 37294465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37298868 37298978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37299448 37299568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37301437 37301550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37302779 37302908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37303260 37303414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37304739 37304843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37305057 37305210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37307297 37307432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37309129 37309267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37310552 37310743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37314198 37314328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37317988 37318085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37323992 37324107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37325901 37325967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37327629 37327776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37328358 37328420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37329190 37329278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37330038 37330132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37331685 37331795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37333463 37333633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37337818 37337918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37341090 37341242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37342549 37342646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37348505 37348596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37349172 37349245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37350160 37350265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37351190 37351356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37352737 37352829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37358081 37358151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37363888 37363984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37364247 37364364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3999 nt):
ATGTCAGATATGGATTATCCTTTGCAAGGACCTGGTTTGCTGTCCGTACCCAACCTTCCAGAGATCAGTT
CCATCCGAAGAGTTCCTCTCCCACCTGAACTTGTTGAGCAGTTTGGACATATGCAGTGTAATTGCATGAT
GGGTGTGTTCCCTCCTATCAGCAGAGCTTGGCTCACAATTGACAGTGATATATTCATGTGGAACTATGAG
GATGGAGGAGACCTTGCCTATTTTGATGGACTTAGTGAGACTATTCTTGCTGTGGGGCTTGTGAAGCCAA
AAGCAGGCATCTTTCAACCTCATGTGCGACACCTCCTGGTTTTGGCGACCCCTGTAGACATAGTAATTCT
TGGACTCAGCTATGCTAATTTGCAAACAGGTTCTGGAGTTCTTAATGATAGTTTGTCTGGTGGAATGCAG
TTGCTTCCAGATCCTTTATATTCTCTTCCTACTGATAATACTTACCTTTTAACAATAACTTCCACTGATA
ATGGCAGAATTTTCTTGGCTGGAAAGGATGGCTGTTTATATGAAGTAGCCTACCAGGCTGAAGCAGGGTG
GTTTAGCCAAAGATGTAGGAAAATAAACCACTCAAAGAGCTCACTTTCTTTCCTTGTTCCTTCCTTGCTA
CAATTCACGTTCTCAGAAGATGATCCTATTCTTCAAATTGCAATTGATAATTCTAGAAATATTTTATATA
CACGATCTGAGAAAGGAGTAATACAGGTGTATGATTTGGGACAAGATGGACAAGGAATGAGCAGAGTTGC
CTCTGTGTCACAGAATGCCATTGTCTCTGCTGCTGGTAACATTGCTAGGACCATCGATCGTTCTGTTTTT
AAACCAATTGTCCAAATAGCAGTGATTGAAAATTCTGAATCACTGGACTGTCAGTTATTGGCTGTCACAC
ATGCAGGTGTTAGGTTATATTTTAGCACTTGTCCATTCAGACAGCCATTAGCACGGCCTAATACACTGAC
GCTGGTTCATGTCCGCTTACCTCCTGGATTCTCAGCATCTTCAACCGTGGAAAAGCCTTCAAAAGTACAT
AGAGCTCTTTATAGTAAAGGTATTCTATTGATGGCAGCCTCAGAAAATGAGGATAATGATATTTTATGGT
GTGTCAACCATGATACTTTTCCTTTCCAAAAGCCAATGATGGAAACCCAGATGACAGCTGGTGTTGATGG
TCATTCCTGGGCTCTTTCTGCGATAGATGAATTGAAAGTAGATAAAATAATTACACCTTTAAACAAGGAT
CATATTCCAATAACTGATTCACCAGTTGTTGTACAGCAGCACATGTTACCTCCGAAGAAATTTGTTCTCC
TCTCAGCACAGGGGAGCCTTATGTTTCATAAACTTAGACCTGTAGATCAACTGAGGCATCTACTTGTGAG
TAATGTGGGAGGAGATGGAGAAGAGATTGAAAGATTCTTTAAATTACATCAGGAAGACCAGGCTTGTGCA
ACTTGCCTTATTCTTGCTTGCTCCACTGCTGCCTGTGATAGAGAAGTATCTGCCTGGGCTACTCGGGCTT
TCTTTAGGTATGGTGGTGAAGCACAGATGAGATTTCCAACCACTCTTCCGCCTCCAAGTAATGTTGGTCC
CATCTTGGGGTCTCCTGTCTATTCTAGTTCTCCTGTTCCTAGTGGTAGTCCCTATCCAAATCCATCCTTT
TTGGGAACACCGTCTCATGGTATACAGCCTCCTGCCATGTCAACTCCAGTGTGTGCTCTGGGAAACCCAG
CAACTCAGGCCACAAATATGAGTTGTGTGACTGGACCAGAGATTGTGTACTCTGGAAAACACAATGGTAT
TTGCATTTACTTTTCTCGGATCATGGGAAACATTTGGGATGCAAGCTTAGTTGTGGAGAGAATATTCAAG
AGTGGCAACAGAGAGATCACTGCAATTGAAAGTAGTGTTCCCTGCCAACTGCTAGAGTCAGTGCTACAAG
AACTAAAGGGTTTGCAGGAATTTCTAGACAGAAACTCCCAGTTTGCAGGAGGACCATTAGGAAATCCAAA
TACTACTGCTAAAGTGCAGCAGAGGCTGATAGGATTCATGCGTCCTGAAAACGGAAATCCCCAGCAAATG
CAACAGGAACTGCAGAGGAAGTTTCATGAGGCTCAACTAAGTGAAAAGATTTCACTTCAGGCAATTCAGC
AGTTGGTTCGAAAATCATATCAGGCTCTGGCTTTATGGAAACTTCTTTGTGAACATCAATTCACTATCAT
TGTGGCAGAACTTCAGAAGGAACTTCAAGAGCAGCTGAAGATCACCACCTTTAAAGATCTTGTAATCAGG
GACAAAGAACTCACAGGGGCATTAATTGCTTCTCTTATCAACTGCTACATCAGAGATAATGCCGCTGTTG
ATGGCATTAGTTTACATTTACAGGATATCTGCCCACTTCTATATAGCACTGATGATGCAATTTGTTCTAA
GGCAAATGAGCTTCTCCAGCGTTCCCGACAAGTTCAAAATAAGACTGAAAAAGAAAGAATGTTAAGGGAA
TCATTAAAGGAATATCAAAAAATTAGCAATCAAGTGGACCTTTCCAATGTTTGTGCTCAGTATAGACAAG
TGAGATTTTATGAGGGTGTGGTGGAACTTTCTCTTACGGCTGCAGAGAAAAAAGATCCTCAAGGTCTTGG
GCTTCATTTCTATAAACATGGAGAACCAGAAGAAGACATAGTTGGACTTCAGGCCTTCCAAGAAAGATTA
AACAGTTACAAATGCATTACAGACACACTTCAAGAACTGGTAAATCAAAGTAAGGCCGCTCCTCAGTCTC
CCAGTGTACCCAAAAAACCTGGTCCTCCAGTGTTGTCATCTGATCCAAATATGCTGAGTAATGAAGAAGC
AGGACATCATTTTGAACAAATGCTTAAATTGTCACAGCGATCCAAGGATGAGCTCTTTAGTATTGCCCTT
TATAATTGGCTAATACAAGTCGACCTTGCAGATAAGCTGCTACAGGTTGCTTCTCCATTTCTGGAGCCAC
ATCTAGTCCGAATGGCCAAAGTTGATCAAAACAGAGTTCGTTATATGGATTTACTCTGGCGGTATTACGA
GAAGAACAGAAGTTTCAGTAATGCTGCTCGTGTACTGTCCAGACTGGCTGACATGCATAGCACAGAAATT
TCACTTCAGCAGCGACTAGAGTACATTGCTCGAGCCATTCTTAGTGCCAAAAGTTCCACTGCCATTTCAT
CAATAGCTGCCGATGGTGAATTTCTTCATGAATTAGAAGAAAAAATGGAGGTTGCTAGGATCCAACTTCA
GATACAGGAGACACTACAAAGGCAGTATTCCCATCATTCTTCTGTACAGGATGCAGTTTCTCAGCTGGAT
TCTGAGCTGATGGACATAACTAAGCTTTATGGGGAATTTGCTGACCCATTTAAACTTGCAGAGTGCAAAC
TTGCAATAATTCATTGTGCCGGTTATTCAGACCCTATATTGGTGCAGACACTTTGGCAAGATATCATAGA
GAAAGAATTGAGTGACAGTGTGACATTGAGCTCCTCGGATAGAATGCATGCTCTTAGTCTCAAGATTGTT
CTCCTTGGCAAAATTTATGCTGGCACACCACGCTTCTTTCCTTTAGATTTTATTGTACAGTTTTTAGAAC
AGCAGGTTTGTACTTTGAACTGGGATGTGGGCTTCGTAATACAGACAATGAATGAAATTGGAGTACCATT
ACCTAGACTACTAGAAGTTTATGATCAGTTGTTCAAATCACGGGATCCATTCTGGAACAGAATGAAGAAG
CCACTGCACCTTTTGGATTGTATACATGTATTATTGATAAGATATGTTGAGAATCCCAGCCAAGTTTTAA
ATTGTGAAAGGAGAAGATTTACAAATCTCTGCCTGGATGCTGTTTGTGGTTACCTTGTTGAGCTCCAGTC
TATGAGCTCGTCAGTAGCAGTACAAGCCATCACTGGGAATTTTAAATCTCTTCAAGCTAAATTAGAACGG
CTTCATTAA

Translation (1332 aa):
MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYE
DGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQ
LLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLL
QFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVF
KPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVH
RALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD
HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACA
TCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSF
LGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERIFK
SGNREITAIESSVPCQLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQM
QQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIR
DKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE
SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERL
NSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIAL
YNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEI
SLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLD
SELMDITKLYGEFADPFKLAECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIV
LLGKIYAGTPRFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK
PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGNFKSLQAKLER
LH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH