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Report for CCDS43257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43257.1 Public Homo sapiens 4 GSTCD 24 110 108 CCDS HistoryNCBI Gene:79807Re-query CCDS DB by CCDS ID:43257.1Re-query CCDS DB by GeneID:79807See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43257.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360505.9 ENSP00000353695.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360505.9Link to Ensembl Protein Viewer:ENSP00000353695.5Re-query CCDS DB by Nucleotide ID:ENST00000360505Re-query CCDS DB by Protein ID:ENSP00000353695
Original member Current member EBI ENST00000394728.4 ENSP00000378216.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394728.4Link to Ensembl Protein Viewer:ENSP00000378216.3Re-query CCDS DB by Nucleotide ID:ENST00000394728Re-query CCDS DB by Protein ID:ENSP00000378216
Original member Current member EBI ENST00000515279.6 ENSP00000422354.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000515279.6Link to Ensembl Protein Viewer:ENSP00000422354.1Re-query CCDS DB by Nucleotide ID:ENST00000515279Re-query CCDS DB by Protein ID:ENSP00000422354
Original member Current member NCBI NM_001031720.3 NP_001026890.2 Accepted alive Link to Nucleotide Sequence:NM_001031720.3Link to Protein Sequence:NP_001026890.2Re-query CCDS DB by Nucleotide ID:NM_001031720Re-query CCDS DB by Protein ID:NP_001026890Link to BLAST:NP_001026890.2
Original member Current member NCBI NM_001370181.1 NP_001357110.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370181.1Link to Protein Sequence:NP_001357110.1Re-query CCDS DB by Nucleotide ID:NM_001370181Re-query CCDS DB by Protein ID:NP_001357110Link to BLAST:NP_001357110.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026890.2 633 Q8NEC7-1 633 100% 0 0
NP_001357110.1 633 Q8NEC7-1 633 100% 0 0

Chromosomal Locations for CCDS 43257.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 105717614 105718039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105719060 105719527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105726579 105726830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105729406 105729499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105822954 105823069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105823231 105823275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105825672 105825800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105834461 105834594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105837859 105837889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105842065 105842134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105845441 105845577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1902 nt):
ATGAAAGCCATAAAGAAAAGTCTTACAGAAGAAGAATACCTGTACCTGGACTTTTCTCACCAAACAGAAG
GATGCATCTTTCCTCTTCATACATCTGTAACTTTATTTCTGTTATCTTACTGTGACTGTAAAATCTTTAA
AATTTGCTTAGTTGTCACCAAAGAGGTGAGTAGAGATAGTTCACTACTAAGAGATGACCTGATCCAGGAT
GTTGAAATACAGATTATTTCAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCTGCAGTAG
TAGAACGATCAGACAATTTTTGTAGAGCAGGACTTGCTGTTGTATTGAGACACATAATCCAGAAATCCTA
TGAAGCAGACCCCTTAAAGAAGGAACTTTTGGAACTTCTGGGCTTTAAAAAGACTTGCTTGAAAGCCTGT
GCTGAAGTTAGTCAGTGGACCAGGCTATGTGAACTCACCATCCCTTTGGCTATTGAGAATTTTCTCAGAG
AATCTTCTGACCAGCCCCCAACTATACCTGTAGAAATACTACAGCTAGAGAAAAAGCTTAGTGAGCCTGT
TAGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGAGTTGGGCCT
CCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGAAACATCTGAAGGGTTGGATTCTTCAT
CCAAGAGTCTGGAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAGGAAGAACCAGCTACTACCAACAG
AGAGCCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGGG
CTTTACTTCACTCTGGCAGATATTGTGCTCTTGCCCTGTATCCATCATTTCTTGGTAATTATCAGCAGGA
AATTTTCTGAGAAGCTGGTAGAATTTCCATTGCTAGCCTCTTGGTACCAGAGGATTCAGGAAGTGCCAGG
AGTAAAAACAGCAGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTTGACAACCTCAACT
GAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTATTTATAGGAGGAC
CAAGACCAACCATGGCCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTTCTCCCCACCCTTGCCCTAC
TTGGACTCTTGATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGGTAAAATGTCCAGTGATCGA
GCTTTGAGGAAGCAGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTGGTGACA
GAATTGTGGATTTCTGCAGCGGTGGGGGCCATGTTGGAATTGTCCTTGCTCACATGCTGCCATCATGTCA
GGTTACATTAATAGAAAACAAGGAATTATCATTAATTCGTGCTAAGAAGAGAAGTGATGAACTGGGTTTA
AGCAACATTTGGTTCATTCAAGCAAATATGGAATATTTTACTGGGATGTTTAATATTGGAGTAGCATTGC
ATGCTTGTGGAGTGGCAACAGACATGGTGATTGAGCACTGTATCAAAACACGGGCTTCCTTCGTCACATG
CCCTTGCTGTTATGGTTTCATTCAGAACACCTCAAAGTTCAATTTTCCAAAAAGTGAACAATTCAAGAAA
ACTTTATCATACAAGGAACACATGATTCTGTGCAGATTTGCAGACCAGACAGCTGTCCAGCTCCCACCCC
AACGAAGGCTCATAGGAAAACAGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATG
TGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGTGGGA
GTCCCCATTTAA

Translation (633 aa):
MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSRDSSLLRDDLIQD
VEIQIISRQELPPIVQNCCLPAVVERSDNFCRAGLAVVLRHIIQKSYEADPLKKELLELLGFKKTCLKAC
AEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGP
PLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSHIRKAKASDLPPLEHVFAEG
LYFTLADIVLLPCIHHFLVIISRKFSEKLVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTST
EQHPNLCEVPGVEEQSDPLFIGGPRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDR
ALRKQQQLNNLVYVVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGL
SNIWFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFPKSEQFKK
TLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQVISMEPESCSPKNNMIVG
VPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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