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Report for CCDS43209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43209.1 Public Homo sapiens 4 KIAA0232 24 110 108 CCDS HistoryNCBI Gene:9778Re-query CCDS DB by CCDS ID:43209.1Re-query CCDS DB by GeneID:9778See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43209.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307659.6 ENSP00000303928.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307659.6Link to Ensembl Protein Viewer:ENSP00000303928.5Re-query CCDS DB by Nucleotide ID:ENST00000307659Re-query CCDS DB by Protein ID:ENSP00000303928
Original member Current member EBI ENST00000425103.5 ENSP00000413739.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425103.5Link to Ensembl Protein Viewer:ENSP00000413739.1Re-query CCDS DB by Nucleotide ID:ENST00000425103Re-query CCDS DB by Protein ID:ENSP00000413739
Original member Current member NCBI NM_001100590.2 NP_001094060.1 Accepted alive Link to Nucleotide Sequence:NM_001100590.2Link to Protein Sequence:NP_001094060.1Re-query CCDS DB by Nucleotide ID:NM_001100590Re-query CCDS DB by Protein ID:NP_001094060Link to BLAST:NP_001094060.1
Original member Current member NCBI NM_014743.3 NP_055558.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014743.3Link to Protein Sequence:NP_055558.2Re-query CCDS DB by Nucleotide ID:NM_014743Re-query CCDS DB by Protein ID:NP_055558Link to BLAST:NP_055558.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094060.1 1395 Q92628 1395 100% 0 0
NP_055558.2 1395 Q92628 1395 100% 0 0

Chromosomal Locations for CCDS 43209.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 6824454 6824684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6842067 6842204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6857164 6857230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6858425 6858506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6860901 6864183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6871574 6871682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6876660 6876757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6880787 6880966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4188 nt):
ATGTACCCTATCTGTACAGTTGTTGTGGATGGTTTGCCATCTGAAAGCTCCTCAAGTTCTTATCCAGGCC
CTGTGTCTGTTTCTGAAATGTCTCTGCTTCATGCTTTGGGTCCAGTGCAGACCTGGCTGGGACAAGAGCT
CGAGAAATGTGGCATTGATGCCATGATTTACACTCGGTATGTCCTCAGTCTTCTGCTGCATGACAGCTAT
GACTACGACCTGCAGGAACAGGAGAATGACATCTTCCTGGGCTGGGAAAAAGGAGCTTATAAGAAATGGG
GAAAGAGTAAGAAAAAATGTTCAGATCTAACTCTAGAAGAAATGAAAAAACAGGCTGCTGTCCAGTGTCT
TCGATCTGCTTCTGATGAAAGCTCTGGTATCGAGACTTTAGTGGAGGAGCTCTGCTCCAGACTGAAAGAC
CTTCAGAGTAAGCAAGAAGAGAAGATTCACAAAAAGTTAGAGGGGTCTCCCTCTCCAGAGGCAGAATTAT
CCCCTCCAGCAAAGGATCAAGTGGAAATGTACTATGAAGCATTTCCACCACTTTCTGAGAAACCAGTTTG
CCTGCAAGAAATCATGACTGTGTGGAACAAGTCTAAAGTCTGTTCTTACTCTAGCTCTTCTTCATCATCC
ACAGCCCCACCAGCTAGCACAGATACTTCCTCTCCTAAGGACTGCAACAGTGAAAGTGAAGTCACCAAGG
AAAGAAGCAGTGAAGTACCCACCACTGTGCATGAGAAAACCCAGAGCAAAAGCAAAAACGAGAAGGAAAA
CAAATTTAGTAATGGCACAATTGAAGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACATAAACCTGAA
GGAAAGATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGG
GAGAATTAAAAGCATCCATGAAGTATGTTAAAGTAAGACACAAGGCACGAGAGATTCGAAACAAAAAAGG
GCGGAATGGGCAAAGCAGGCTTTCTTTGAAGCACGGTGAAAAGGCTGAAAGGAACATTCATACTGGAAGT
AGTAGCAGTAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGCGGGGTAAGAGACCTTTAAAAGAAATAG
GGAGAAAAGATCCTGGGAGCACTGAAGGAAAAGACCTGTACATGGAGAATAGAAAGGACACAGAGTATAA
AGAGGAGCCCTTGTGGTACACCGAGCCAATTGCTGAATATTTTGTTCCTCTGAGCAGAAAAAGTAAACTA
GAGACCACATACCGAAACAGACAGGATACAAGTGATCTGACATCAGAGGCAGTGGAAGAATTGTCTGAAT
CAGTGCATGGTCTTTGTATCAGCAACAATAATCTTCATAAAACATACCTCGCAGCAGGTACTTTCATTGA
TGGTCATTTTGTAGAAATGCCTGCAGTTATAAATGAGGATATTGACCTCACTGGGACCTCATTATGTTCT
CTACCAGAGGACAATAAATACCTGGATGATATTCATCTATCAGAATTAACGCACTTCTATGAAGTGGATA
TTGATCAATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGATTTTGAATATGAT
TCGACAGAAAAGCAAAGAGAACACAGATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGTATGGAGTTG
CAAGGGGAACGTGCAATATGGACAGATTCTACCAGCTCCGTAGGTGCTGAGGGCTTATTCCTGCAGGACC
TTGGCAATCTGGCTCAGTTTTGGGAGTGCTGTTCATCCAGCTCCGGTGATGCTGATGGGGAGAGTTTTGG
AGGAGACTCTCCAGTTAGACTCTCTCCCATCTTAGACAGCACAGTGCTCAATTCACACCTGCTTGCTGGC
AATCAAGAGCTCTTTTCAGATATTAATGAAGGATCTGGTATAAACTCTTGTTTTTCAGTGTTTGAAGTGC
AATGCAGTAATTCTGTTTTACCATTTTCTTTTGAAACACTCAACTTGGGAAATGAAAATACAGATTCTAG
TGCTAATATGCTTGGGAAAACACAGTCTAGATTGCTAATATGGACCAAAAATAGTGCCTTTGAAGAAAAT
GAACACTGTTCTAATCTTTCAACAAGAACTTGTAGTCCATGGTCCCATTCAGAAGAAACACGTTCAGACA
ATGAAACATTAAATATTCAGTTTGAAGAATCCACACAGTTTAATGCCGAAGATATTAATTATGTAGTTCC
TAGAGTCTCGTCAAATTATGTAGATGAAGAACTTCTAGATTTTTTGCAAGATGAAACTTGCCAGCAAAAC
AGTAGAACTTTAGGTGAGATTCCTACATTAGTTTTCAAAAAAACATCTAAACTAGAATCCGTCTGTGGTA
TTCAGCTAGAACAAAAAACAGAAAACAAAAATTTTGAAACTACACAAGTATGTAATGAAAGTCCACATGG
AGATGGCTACAGCTCAGGGGTTATTAAAGACATTTGGACAAAGATGGCAGACACAAATTCTGTGGCTACA
GTAGAAATAGAAAGAACTGATGCTGAGTTGTTTTCGGCAGATGTAAATAACTACTGCTGCTGTCTAGATG
CTGAAGCTGAACTGGAGACCCTTCAGGAGCCTGATAAGGCTGTGCGGAGGTCAGAGTACCATCTGTGGGA
GGGACAGAAAGAGAGCCTGGAGAAAAGAGCATTTGCTTCTAGTGAGCTATCAAACGTGGATGGTGGTGAT
TATACAACACCCTCTAAACCCTGGGATGTAGCCCAAGATAAAGAAAACACATTCATTCTTGGAGGAGTTT
ATGGAGAACTCAAAACCTTCAATAGTGATGGGGAGTGGGCAGTCGTACCACCTAGTCACACAAAAGGAAG
TCTGTTACAGTGTGCAGCTTCTGATGTTGTGACGATAGCTGGTACAGATGTCTTTATGACCCCAGGAAAC
AGTTTTGCTCCTGGGCACAGGCAGTTATGGAAACCCTTCGTGTCATTTGAACAGAATGATCAGCCGAAGA
GTGGGGAAAATGGGTTAAATAAGGGATTTTCTTTTATCTTCCATGAAGACTTACTAGGAGCTTGTGGCAA
CTTTCAAGTCGAAGATCCTGGACTTGAATACTCATTTTCTTCCTTTGACTTAAGCAATCCATTTTCACAA
GTTCTTCATGTAGAATGCTCATTTGAACCTGAAGGGATTGCATCTTTCAGCCCCAGTTTTAAACCGAAAT
CAATCCTCTGTTCTGATTCAGACAGTGAAGTGTTTCACCCCAGGATATGTGGTGTTGACAGAACACAATA
CAGGGCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCAGGAGGA
GGAAGCGAGTCAGAATTTGAATCTGAGAAAGATGAAGCAAATATTCCCATTCCTTCTCAAGTTGATATAT
TTGAAGATCCGCAGGCAGATCTCAAACCTTTGGAAGAAGATGCAGAGAAAGAAGGCCATTACTATGGAAA
ATCAGAGCTTGAGTCTGGAAAATTCCTTCCCAGGTTAAAAAAATCTGGGATGGAAAAGAGTGCTCAGACA
TCACTGGATTCCCAGGAGGAATCAACTGGGATTCTTTCAGTAGGAAAGCAAAATCAGTGTTTGGAATGTA
GCATGAATGAATCCCTGGAAATAGATTTAGAAAGCTCAGAAGCAAATTGTAAAATAATGGCACAATGCGA
GGAAGAAATTAATAATTTTTGTGGTTGCAAAGCAGGTTGTCAGTTTCCTGCTTATGAAGATAATCCAGTT
TCTTCGGGACAGCTGGAAGAGTTCCCTGTATTGAACACTGATATACAAGGAATGAATAGAAGTCAAGAAA
AACAGACCTGGTGGGAAAAAGCCTTGTACTCTCCTCTTTTTCCTGCATCAGAGTGTGAAGAATGTTACAC
AAATGCCAAGGGAGAGAGTGGTTTAGAAGAATATCCAGATGCTAAAGAGACACCCAGTAATGAAGAGCGC
CTGTTAGATTTTAATAGGGTGTCTTCTGTTTATGAAGCAAGATGTACAGGAGAGAGAGATTCTGGAGCAA
AGTCAGATGGCTTCCGCGGAAAGATGTGCTCCAGCGCCAGCTCCACCTCGGAAGAGACAGGCTCAGAAGG
CGGAGGCGAGTGGGTGGGCCCTAGTGAAGAGGAGCTCTTTTCTCGAACTCATCTCTAA

Translation (1395 aa):
MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRYVLSLLLHDSY
DYDLQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLKD
LQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSS
TAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPE
GKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGS
SSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL
ETTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINEDIDLTGTSLCS
LPEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQKSKENTDFEAECCIVLDGMEL
QGERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGDADGESFGGDSPVRLSPILDSTVLNSHLLAG
NQELFSDINEGSGINSCFSVFEVQCSNSVLPFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEEN
EHCSNLSTRTCSPWSHSEETRSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQN
SRTLGEIPTLVFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT
VEIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFASSELSNVDGGD
YTTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQCAASDVVTIAGTDVFMTPGN
SFAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHEDLLGACGNFQVEDPGLEYSFSSFDLSNPFSQ
VLHVECSFEPEGIASFSPSFKPKSILCSDSDSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGG
GSESEFESEKDEANIPIPSQVDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQT
SLDSQEESTGILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV
SSGQLEEFPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPDAKETPSNEER
LLDFNRVSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGEWVGPSEEELFSRTHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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