CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS42420.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
42420.1 |
Public |
Homo sapiens |
18 |
CABYR |
24 |
110 |
108 |
|
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 42420.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000399496.8 |
ENSP00000382419.3 |
MANE Select |
Accepted |
alive |
|
|
|
EBI |
ENST00000399499.5 |
ENSP00000382421.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_138644.3 |
NP_619585.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_153769.3 |
NP_722453.1 |
MANE Select |
Accepted |
alive |
|
Chromosomal Locations for CCDS 42420.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1140 nt): ATGATTTCTTCAAAGCCCAGACTTGTCGTACCCTATGGCCTCAAGACTCTGCTCGAGGGAATTAGCAGAG CTGTTCTCAAAACCAACCCATCAAACATCAACCAGTTTGCAGCAGCTTATTTTCAAGAACTTACTATGTA TAGAGGGAATACTACTATGGATATAAAAGATCTGGTTAAACAATTTCATCAGATTAAAGTAGAGAAATGG TCAGAAGGAACGACACCACAGAAGAAATTAGAATGTTTAAAAGAACCAGGAAAAACATCTGTAGAATCTA AAGTACCTACCCAGATGGAAAAATCTACAGACACAGACGAGGACAATGTAACCAGAACAGAATATAGTGA CAAAACCACCCAGTTTCCATCAGTTTATGCTGTGCCAGGCACTGAGCAAACGGAAGCAGTTGGTGGTCTT TCTTCCAAACCAGCCACCCCTAAGACTACTACCCCACCCTCATCACCACCTCCAACAGCTGTCTCACCAG AGTTTGCCTACGTCCCAGCTGACCCAGCTCAGCTTGCTGCTCAGATGTTAGCAATGGCAACAAGTGAACG AGGACAACCACCACCATGTTCTAACATGTGGACCCTTTATTGTCTAACTGATAAGAATCAACAAGGTCAC CCATCACCGCCACCTGCACCTGGGCCTTTTCCCCAAGCAACCCTCTATTTACCTAATCCTAAGGATCCAC AGTTTCAGCAGCATCCACCAAAAGTCACTTTTCCAACTTATGTGATGGGCGACACCAAGAAGACCAGTGC CCCACCTTTTATCTTAGTAGGCTCAAATGTTCAGGAAGCACAGGGATGGAAACCTCTTCCTGGACATGCT GTCGTTTCACAGTCAGATGTCTTGAGATATGTTGCAATGCAAGTGCCCATTGCTGTTCCTGCAGATGAGA AATACCAGAAACATACCCTAAGTCCCCAGAATGCTAATCCTCCAAGTGGACAAGATGTCCCCAGGCCAAA AAGCCCTGTTTTCCTTTCTGTTGCTTTCCCAGTAGAAGATGTAGCTAAAAAAAGTTCAGGATCTGGTGAC AAATGTGCTCCCTTTGGAAGTTACGGTATTGCTGGGGAGGTAACCGTGACTACTGCTCACAAACGTCGCA AAGCAGAAACTGAAAACTGA
Translation (379 aa): MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMDIKDLVKQFHQIKVEKW SEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGL SSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQLAAQMLAMATSERGQPPPCSNMWTLYCLTDKNQQGH PSPPPAPGPFPQATLYLPNPKDPQFQQHPPKVTFPTYVMGDTKKTSAPPFILVGSNVQEAQGWKPLPGHA VVSQSDVLRYVAMQVPIAVPADEKYQKHTLSPQNANPPSGQDVPRPKSPVFLSVAFPVEDVAKKSSGSGD KCAPFGSYGIAGEVTVTTAHKRRKAETEN
|