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Report for CCDS41910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41910.1 Public Homo sapiens 14 PARP2 24 110 108 CCDS HistoryNCBI Gene:10038Re-query CCDS DB by CCDS ID:41910.1Re-query CCDS DB by GeneID:10038See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41910.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000250416.9 ENSP00000250416.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000250416.9Link to Ensembl Protein Viewer:ENSP00000250416.5Re-query CCDS DB by Nucleotide ID:ENST00000250416Re-query CCDS DB by Protein ID:ENSP00000250416
Original member Current member NCBI NM_005484.4 NP_005475.2 Accepted alive Link to Nucleotide Sequence:NM_005484.4Link to Protein Sequence:NP_005475.2Re-query CCDS DB by Nucleotide ID:NM_005484Re-query CCDS DB by Protein ID:NP_005475Link to BLAST:NP_005475.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005475.2 583 Q9UGN5-1 583 100% 0 0

Chromosomal Locations for CCDS 41910.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20343642 20343687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20344932 20345126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20345394 20345464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20346863 20346913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20350526 20350622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20351047 20351122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20352245 20352347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20354085 20354247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20354809 20354947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20355752 20355815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20355897 20356031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20356307 20356434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20356590 20356689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20357051 20357149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20357396 20357520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20357638 20357797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1752 nt):
ATGGCGGCGCGGCGGCGACGGAGCACCGGCGGCGGCAGGGCGAGAGCATTAAATGAAAGCAAAAGAGTTA
ATAATGGCAACACGGCTCCAGAAGACTCTTCCCCTGCCAAGAAAACTCGTAGATGCCAGAGACAGGAGTC
GAAAAAGATGCCTGTGGCTGGAGGAAAAGCTAATAAGGACAGGACAGAAGACAAGCAAGATGGTATGCCA
GGAAGGTCATGGGCCAGCAAAAGGGTCTCTGAATCTGTGAAGGCCTTGCTGTTAAAGGGCAAAGCTCCTG
TGGACCCAGAGTGTACAGCCAAGGTGGGGAAGGCTCATGTGTATTGTGAAGGAAATGATGTCTATGATGT
CATGCTAAATCAGACCAATCTCCAGTTCAACAACAACAAGTACTATCTGATTCAGCTATTAGAAGATGAT
GCCCAGAGGAACTTCAGTGTTTGGATGAGATGGGGCCGAGTTGGGAAAATGGGACAGCACAGCCTGGTGG
CTTGTTCAGGCAATCTCAACAAGGCCAAGGAAATCTTTCAGAAGAAATTCCTTGACAAAACGAAAAACAA
TTGGGAAGATCGAGAAAAGTTTGAGAAGGTGCCTGGAAAATATGATATGCTACAGATGGACTATGCCACC
AATACTCAGGATGAAGAGGAAACAAAGAAAGAGGAATCTCTTAAATCTCCCTTGAAGCCAGAGTCACAGC
TAGATCTTCGGGTACAGGAGTTAATAAAGTTGATCTGTAATGTTCAGGCCATGGAAGAAATGATGATGGA
AATGAAGTATAATACCAAGAAAGCCCCACTTGGGAAGCTGACAGTGGCACAAATCAAGGCAGGTTACCAG
TCTCTTAAGAAGATTGAGGATTGTATTCGGGCTGGCCAGCATGGACGAGCTCTCATGGAAGCATGCAATG
AATTCTACACCAGGATTCCGCATGACTTTGGACTCCGTACTCCTCCACTAATCCGGACACAGAAGGAACT
GTCAGAAAAAATACAATTACTAGAGGCTTTGGGAGACATTGAAATTGCTATTAAGCTGGTGAAAACAGAG
CTACAAAGCCCAGAACACCCATTGGACCAACACTATAGAAACCTACATTGTGCCTTGCGCCCCCTTGACC
ATGAAAGTTATGAGTTCAAAGTGATTTCCCAGTACCTACAATCTACCCATGCTCCCACACACAGCGACTA
TACCATGACCTTGCTGGATTTGTTTGAAGTGGAGAAGGATGGTGAGAAAGAAGCCTTCAGAGAGGACCTT
CATAACAGGATGCTTCTATGGCATGGTTCCAGGATGAGTAACTGGGTGGGAATCTTGAGCCATGGGCTTC
GAATTGCCCCACCTGAAGCTCCCATCACAGGTTACATGTTTGGGAAAGGAATCTACTTTGCTGACATGTC
TTCCAAGAGTGCCAATTACTGCTTTGCCTCTCGCCTAAAGAATACAGGACTGCTGCTCTTATCAGAGGTA
GCTCTAGGTCAGTGTAATGAACTACTAGAGGCCAATCCTAAGGCCGAAGGATTGCTTCAAGGTAAACATA
GCACCAAGGGGCTGGGCAAGATGGCTCCCAGTTCTGCCCACTTCGTCACCCTGAATGGGAGTACAGTGCC
ATTAGGACCAGCAAGTGACACAGGAATTCTGAATCCAGATGGTTATACCCTCAACTACAATGAATATATT
GTATATAACCCCAACCAGGTCCGTATGCGGTACCTTTTAAAGGTTCAGTTTAATTTCCTTCAGCTGTGGT
GA

Translation (583 aa):
MAARRRRSTGGGRARALNESKRVNNGNTAPEDSSPAKKTRRCQRQESKKMPVAGGKANKDRTEDKQDGMP
GRSWASKRVSESVKALLLKGKAPVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQLLEDD
AQRNFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLQMDYAT
NTQDEEETKKEESLKSPLKPESQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQ
SLKKIEDCIRAGQHGRALMEACNEFYTRIPHDFGLRTPPLIRTQKELSEKIQLLEALGDIEIAIKLVKTE
LQSPEHPLDQHYRNLHCALRPLDHESYEFKVISQYLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAFREDL
HNRMLLWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEV
ALGQCNELLEANPKAEGLLQGKHSTKGLGKMAPSSAHFVTLNGSTVPLGPASDTGILNPDGYTLNYNEYI
VYNPNQVRMRYLLKVQFNFLQLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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