NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS41853.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41853.1 Public Homo sapiens 12 CFAP251 24 110 108 CCDS HistoryNCBI Gene:144406Re-query CCDS DB by CCDS ID:41853.1Re-query CCDS DB by GeneID:144406See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41853.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288912.9 ENSP00000288912.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000288912.9Link to Ensembl Protein Viewer:ENSP00000288912.4Re-query CCDS DB by Nucleotide ID:ENST00000288912Re-query CCDS DB by Protein ID:ENSP00000288912
Original member Current member NCBI NM_144668.6 NP_653269.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144668.6Link to Protein Sequence:NP_653269.3Re-query CCDS DB by Nucleotide ID:NM_144668Re-query CCDS DB by Protein ID:NP_653269Link to BLAST:NP_653269.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653269.3 1149 Q8TBY9-1 1149 100% 0 0

Chromosomal Locations for CCDS 41853.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 121921306 121921683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121923622 121923990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121931746 121931886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121934247 121934356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121942534 121942645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121942895 121942975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121948984 121949061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121951480 121951530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121954120 121954334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121957074 121957268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121958272 121958522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121958943 121959094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121960585 121960758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121961978 121962162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121966955 121967069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121968006 121968169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121975244 121975334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121975542 121975685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121999716 121999944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122001497 122001598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122003652 122003764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3450 nt):
ATGTCAGATGCAGCAGAAGCTCCCCGAGAAGCAACAGGAGAAAATGGAGAAACAGAAATGAAAGAAGAGG
AGGAACCTAATCCAAATTATAAAGAAGTAGAAGATCCACAACAGGAATCAAAAGATGACACAATAGCATG
GAGAGAGTCTCAGGAGGAGGAGAGGAAAACGGGCGAGGAGGAAGGGGAGGAGGAGGGGAAGGAGGACAAA
AAGATTGTCATGGAAGAAACTGAGGAAAAGGCTGGAGAAGTCCAAGAGAAGGAGGCTTCAGGAATACAGG
AAGAAACCACAGTAGAGCCCCAAGAAGTCACAGCGTCCATGATCCGTTTGGAGACACAGATTACTGATTC
CCAGTCAATCACATCAGGAATTTTCCCAAAAACCCAAAGAGGTAGCAAGTCAAAGCTTTCCTTACAATTG
GAGGATGCAGAAACAGATGAGCTTTTAAGAGACCTGAGCACACAAATTGAATTTCTTGATTTGGATCAAA
TCAGTCCTGAGGAACAACAGATTAGTTCCCCTGAAAGGCAGCCCTCAGGAGAGCTTGAGGAGAAAACCGA
CCGGATGCCCCAAGATGAACTGGGACAAGAAAGAAGGGACTTGGAGCCAGAAAACAGAGAGGAGGGACAA
GAAAGGAGAGTATCCGACATCCAGTCCAAAGCAGGGATCTCCCGGGAGTCACTGGTGTCCAGCACCACAG
AGGACATTCTGTTTCAAAAGGATAAAAGCACCCCGGTGTATCCCTTGACCATGACCTGGTCGTTTGGATG
GAACAGTTCTCTTCCTGTTTACTATATTCGAGAGGAAAGGCAGAGAGTTCTTCTGTATGTTTGTGCTCAC
ACTGCGATCATCTACAACGTGTTCAGGAACAATCAATACCACCTTCAGGGCCACGCCAATATTATCTCCT
GCCTCTGCGTCAGTGAAGACAGGCGGTGGATCGCCACAGCAGACAAAGGGCCAGACTGCCTGGTGATTAT
ATGGGACTCCTTCACAGGTATTCCTGTGCACACAATATTTGACAGCTGCCCTGAAGGGAATGGCATCATG
GCCATGGCCATGACCCACGACGCCAAGTATCTGGCAACCATCTCAGATGCTGAAGTCCAGAAGGTATGCA
TCTGGAAGTGGACTTTGGCAGTGGAAACGCCAGCATGCACTCTCGAACTCCCCACAGAGTACGGTGTTCA
GAACTACGTTACTTTTAACCCAACAAATAATAAAGAATTGGTGAGCAATAGTAAAACACGGGCAATATAT
TATGCATGGTATGAAGAGAGGGATACACTGGCTCACAGTGCCCCACTTTTAACTGAAAAAACCTTCAACA
AGCTTGTGGGAAAGTTTAGCCAGTCCATCTTTCACTTGAATTTAACACAAATACTCTCAGCCACAATGGA
AGGGAAGCTGGTTGTCTGGGACATACACCGCCCACCCTCATCTGCCTCCACCTTTTTGGGCTTTCCCTAT
ATCAAGCCTTGTAAATTGGTTCATTTGCAGAAAGAGGGTATCACGGTACTTACCACAATTGATAGCTACA
TTGTCACAGGTGACATTAAGGGGAACATTAAGTTCTATGATCACACCCTGTCTATTGTTAACTGGTACAG
TCACTTGAAACTGGGCGCCATAAGAACTCTGTCCTTTTCAAAGACCCCAGCAACTCCTCCTACTGAAAAA
TCAAACTATCCTCCTGACTGCACTTTAAAAGGTGACCTTTTTGTCTTAAGGAATTTTATCATTGGAACAT
CTGATGCCGCGGTGTACCACTTAACAACAGATGGGACCAAACTTGAGAAGTTATTTGTAGAGCCCAAGGA
TGCCATTTGTGCCATCTCCTGCCACCCATATCAACCCCTCATTGCCATCGGGAGCATCTGTGGGATGATC
AAAGTGTGGAATTATGAAAACAAACAATATCTTTTCAGCAGGGTTTTTGAGAAGGGGCTTGGAGTCCAGA
GTCTGACCTACAACCCCGAAGGAGCCCTTCTTGGAGCTGGCTTTACAGAGGGGACAGTTTACATTCTTGA
TGCAATGTCTTTAGAAAATGAAAGCCCAGAGCCTTTCAAATATTCCAGAACCAGTGTGACTCATATAAGC
TTTTCCCATGACTCCCAGTATATGGCAACTGCTGATAGAAGTTTTACTGTGGCTGTTTACATGCTGGTGG
TCAGAAATGGACAGAGGGTCTGGGAGTACTTAGCAAGACTTCGCTCTCATCGCAAAAGCATTCGAAGTCT
CCTGTTTGGGGTTTACCTGGACAGCAATGAGCCTAGACTGCTGAGCCTTGGGACAGACAGGCTCTTGATA
GAGTATGATCTTCTCAGGAGCTACAAAGACCACCTGGAAGTCCTGGACATTCACCACACCGACCAGGGCT
GCTATCCCACCTGCATGGTCTGGTACCCACCACTCACCAGGGAACTCTTCCTGCTTATTTGCAACAGTGG
CTACAAAGTGAAGCTTTTTAATGCTACTACCAAAATGTGCAGAAAGACGCTTCTGGGGCCAGCTTATGGT
TCCCCTATTGAGCAGACACAAGTCCTCCCAGTGAGAAGCATGGCGGAGCTACAGAAACGCTACTTGGTGT
TTATTAACAGAGACAAGGTGGGACTTCAGATCTTACCAGTTGACGGCAATCCACATAAGACATCTGCTAT
TGTTTGCCACCCGAACGGGGTGGCCGGCATGGCCGTTTCCTATGATGGCTGCTACGCCTTCACTGCGGGA
GGGCACGATCGCTCGGTGGTGCAGTGGAAAATCACCTTAAGTGTCCTGGAGGCAGCGGTTTCTCTTGGGG
GTGAAGACTTGACCCCATTCTATGGTCTGCTGTCTGGTGGCCGGGAAGGAAAATTCTACAGGGAGCTAGA
AGACTACTTCTACTATTCTCAGCTCCGCAGTCAAGGCATCGACACAATGGAGACCAGAAAGGTGTCAGAA
CACATTTGCCTGTCAGAGCTTCCTTTTGTCATGAGAGCAATTGGCTTTTACCCATCTGAAGAGAAGATTG
ATGATATATTTAACGAAATCAAATTTGGTGAATATGTGGACACTGGAAAGCTAATCGACAAGATCAACTT
ACCAGATTTCCTAAAAGTGTACCTTAACCACAAGCCACCTTTTGGTAACACCATGAGTGGCATCCACAAG
AGCTTTGAGGTGCTCGGTTATACCAACTCCAAAGGGAAAAAGGCCATTCGAAGAGAGGACTTCCTGAGAC
TGCTCGTTACTAAAGGTGAGCATATGACGGAGGAGGAGATGTTGGATTGCTTTGCTTCACTGTTTGGCCT
GAATCCCGAGGGATGGAAATCCGAGCCTGCAACCTGCTCCGTCAAAGGTTCAGAAATTTGCCTTGAAGAA
GAACTTCCAGACGAAATCACTGCAGAAATATTCGCGACTGAAATTCTTGGCTTAACCATTTCAGAAGATT
CCGGCCAGGATGGTCAGTGA

Translation (1149 aa):
MSDAAEAPREATGENGETEMKEEEEPNPNYKEVEDPQQESKDDTIAWRESQEEERKTGEEEGEEEGKEDK
KIVMEETEEKAGEVQEKEASGIQEETTVEPQEVTASMIRLETQITDSQSITSGIFPKTQRGSKSKLSLQL
EDAETDELLRDLSTQIEFLDLDQISPEEQQISSPERQPSGELEEKTDRMPQDELGQERRDLEPENREEGQ
ERRVSDIQSKAGISRESLVSSTTEDILFQKDKSTPVYPLTMTWSFGWNSSLPVYYIREERQRVLLYVCAH
TAIIYNVFRNNQYHLQGHANIISCLCVSEDRRWIATADKGPDCLVIIWDSFTGIPVHTIFDSCPEGNGIM
AMAMTHDAKYLATISDAEVQKVCIWKWTLAVETPACTLELPTEYGVQNYVTFNPTNNKELVSNSKTRAIY
YAWYEERDTLAHSAPLLTEKTFNKLVGKFSQSIFHLNLTQILSATMEGKLVVWDIHRPPSSASTFLGFPY
IKPCKLVHLQKEGITVLTTIDSYIVTGDIKGNIKFYDHTLSIVNWYSHLKLGAIRTLSFSKTPATPPTEK
SNYPPDCTLKGDLFVLRNFIIGTSDAAVYHLTTDGTKLEKLFVEPKDAICAISCHPYQPLIAIGSICGMI
KVWNYENKQYLFSRVFEKGLGVQSLTYNPEGALLGAGFTEGTVYILDAMSLENESPEPFKYSRTSVTHIS
FSHDSQYMATADRSFTVAVYMLVVRNGQRVWEYLARLRSHRKSIRSLLFGVYLDSNEPRLLSLGTDRLLI
EYDLLRSYKDHLEVLDIHHTDQGCYPTCMVWYPPLTRELFLLICNSGYKVKLFNATTKMCRKTLLGPAYG
SPIEQTQVLPVRSMAELQKRYLVFINRDKVGLQILPVDGNPHKTSAIVCHPNGVAGMAVSYDGCYAFTAG
GHDRSVVQWKITLSVLEAAVSLGGEDLTPFYGLLSGGREGKFYRELEDYFYYSQLRSQGIDTMETRKVSE
HICLSELPFVMRAIGFYPSEEKIDDIFNEIKFGEYVDTGKLIDKINLPDFLKVYLNHKPPFGNTMSGIHK
SFEVLGYTNSKGKKAIRREDFLRLLVTKGEHMTEEEMLDCFASLFGLNPEGWKSEPATCSVKGSEICLEE
ELPDEITAEIFATEILGLTISEDSGQDGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH