NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS41631.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41631.2 Public Homo sapiens 11 QSER1 24 110 108 CCDS HistoryNCBI Gene:79832Re-query CCDS DB by CCDS ID:41631.2Re-query CCDS DB by GeneID:79832See the combined annotation on chromosome 11 in Sequence Viewer

Public Note for CCDS 41631.1
The coding region has been updated to extend the N-terminus and this extension is supported by conservation data.

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 41631.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650167.2 ENSP00000496900.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000650167.2Link to Ensembl Protein Viewer:ENSP00000496900.1Re-query CCDS DB by Nucleotide ID:ENST00000650167Re-query CCDS DB by Protein ID:ENSP00000496900
Original member Current member NCBI NM_001076786.3 NP_001070254.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001076786.3Link to Protein Sequence:NP_001070254.2Re-query CCDS DB by Nucleotide ID:NM_001076786Re-query CCDS DB by Protein ID:NP_001070254Link to BLAST:NP_001070254.2

Chromosomal Locations for CCDS 41631.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 32893126 32893334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32927157 32927269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32927962 32928123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32931743 32935435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32953857 32954179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32955296 32955412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32955988 32956121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32957869 32958086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32966300 32966437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32969046 32969143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32973397 32973549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32975248 32975343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32976334 32976474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5595 nt):
ATGGACAGGAACTACGCGACCTCGGGCTTCACCGAGCCGCCGCCGCCGCCGCCGCCCGCGCCCCCCGCCG
CCCCCGTCCCCGCCAGCGCCGCTGCGCAGCCCCCCGCCCCAGCCTGGGCGTACGAACCCCGAGCCGCCGC
CGCCGCCGCCAGCAGCAGCTGCAGCAGTGGCAGCTGCAGTAGCGGCAGCAGCCCCAGCCTCAAGGCCAGT
TTAAGCTATGAAGAAGGACATCCCTCACACTCTGAAACAGATCTCCTTCAGAGACAGAGTTTTGCAGCCT
CTCATCAGCTTCCTGGATATGCTCCCACACCTCAGCCTACTGGTCTTTCTGGAATATTTGATACTAGTGT
GAACAGTGCCAGCAGTAACACTAAAGAGTCTTCAGTGATGAATTTTCTGTCTACTGCTGAATCCCGAACT
GCTCAGGCTGCTGCTTCAGGAACTACTCTCTTACCACAATTCAGGGCTCCATCCTGGCAGACAGGCATGC
ATTCCTCAGCAGCAACTGAGCTGTTTGCTACTGGACCTTTGCCAAGCACTGGAACACTTCCACCATCTCT
CTCTGCTTATCAGCATCCCACCACCTTCAGCAATAGAAACTTTGCTACCACTTCACCTTTGGTGCTTCAG
GATTCAACTTTTAACACTACATCAAATGGAATTTTAAGTCATCATGACCCTTTGCTACAAATCAAGACTT
CCCAGGGAACTGTTCCAACTGCTTTGGCATTTGAGCGCCTGGGCAGTTCTGTATTAAGTAACAGCATACC
ACCTCAGTCTTCAACATACCGCTCAGCTCAAGAGTCTGCACCCCATCTTTTACAACCTCAATTTAGTTTG
TTGCCTTCAGCACTTGGGGGATCCCAGCAGACTCCTCAAGCCTACAGTTCAACTCTCTTTACTAGTTCTA
CTGCTTCCATTGAAAGAGCTCTTCTTCGAGAATGTAGTGTTATTAAACACCATCAGCGGCCTTCAGGTAC
CCAGTCAATTCAGGCACAACTGACTGGTTCACAGCACTCCTTACATAGTTATCTATCAAATTCAAGTGTA
GTTAATTTTCAGGAAACAACCAGGCAGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGGTGA
GCAACGGAGGATTACAACAGAAGACCTCCCAGGTCTCAGTGGAACTTGCTCAGTCTTACTCATCTGCGAT
TCCATCATCAGGGTATCCTCCTTCTACTACAAAAATAAAAAGCTGTTCTACAGAACAACCACTGACATCA
ACCAAGACCCCTAAACCTCAAAGTATAATTCCTCCTGTGCAAACACTAAGCTATTCCAAACCTTTACATA
ATCAGAGTTCTGTAATATCGGGCCAAGCACAAATTTATTCTACAGCGCAGCTACCAAGCCTTTTATCAGT
TAGTCAGTCCCAAAATTACGGTTTAGTACAGCCACATAATGTGCCATCTATTGTTCATTCACAGGTTTAT
AGGTCCAGCAAGGTTGAGAAATTGCCACCCTTGTATAAAACATTGACTTTTTCTGGGTCATCTCAGACTG
TAACTCCTGAAAATCAGACGCTTAATTATTCATCTAATCAGCAAGAGGTATTGTCTTCAGTTACAAATGA
GAATTACCCTGCTCAAACAAGAGATCTGTCTTCAGTAAGTCAGTCTCAAAGTTACTCATCTGGTCACTCT
CAGGGTTTATCACCAGTTAGCCAGACACAGGTTAGCTATTCATCTCAATCACAAGTTTTGTCAGTTGTTA
GTCTTTCAGAAAGCTATGCTTCAGGGGAGTCCCTAACATTAACAGCCCCTTCTCTTTCTTATTCTTCTGC
CTCTCGGGCTCAGAATTTGCCAGACTCTAGCCCGACCCAGAATTATATTTCTATGCATTCTTCCCAAAAT
GTTCAGACTCAAGAGTCATCATCTCCCCAGTCCCAGAAGTTTTTGCCTGCTGTCCAGTCATCATCTTTTG
CATCCTCTACTCATTGTCAGACATTACAAAATAACATAACTTCCCCTGACCCAAAGTCTTATGCTGAAAG
AAAGCTTGACTCAGATGTGTATCCATCTTCAAAGCAAGAAGATGGTTTTCCAATGCAAGAGTTACAGGTG
TTGCAGCCACAAGCATCTCTTGAGTCATCAACCCAAAGGCTATCTGATGGAGAAATTAATGCTCAAGAAT
CAACTTATAAGGTGTCAAAGGCAGATGACAGATATTCTCAGAGTGTAATCAGAAGTAATTCCCGTCTTGA
AGATCAAGTTATTGGGGTTGCTCTGCAAGCATCAAAAAAAGAAGAAAGTGTTGTTGGTTCAGTGACACAA
CTTAACCAACAAATTGGCCAAGTCAATAATGCAGCTACCCTTGATCTTAAGAACTCAACTAATTTAATAC
AGACTCCACAAATAAGGTTGAATACTAAAGACTTAAAGCAGCAACATCCTCTCATACTTAAGGTGCATGA
GTCCAAGGTCCAGGAACAGCACGATCAAATAATTAATGCTTCATCTCAGATTCAAATTCCAAATCATGCT
TTAGGGCATGGCCATCAGGCATCTCTTCCTAATACACAGGTCCTTTTAGATTCTGCCTGTGATTTACAAA
TTCTTCAGCAGTCAATACTGCAGGCAGGTTTAGGTCAAGTAAAGGCATCTTTACAAGCACAGCGTGTTCA
AAGCCCTCAACAAATAGTACATCCCTTCCTTCAGATGGAAGGTCATGTTATTCAAAGCAATGGTGATCAT
TCTCAGCAGCAACTCCATCCTCAAAATTCTGAAGTTATGAAAATGGACCTCTCTGAGTCTTCAAAACCAT
TACAACAACATCTAACAACAAAGGGCCATTTTAGTGAAACAAATCAACATGATTCAAAGAATCAGTTTGT
TTCTCTTGGATCGATGTGTTTCCCAGAGGCAGTGCTTCTTAGTGATGAAAGAAATATTTTATCAAATGTA
GATGATATCTTAGCAGCTACAGCAGCAGCTTGTGGAGTTACACCTACTGATTTTTCCAAGTCAACTTCAA
ATGAAACCATGCAGGCTGTTGAAGATGGTGATTCTAAATCTCATTTTCAGCAGTCATTAGATGTCAGGCA
TGTGACTTCAGATTTTAACTCTATGACAGCTACAGTAGGAAAGCCACAGAATATAAATGATACTTCCTTA
AATGGAAATCAGGTTACTGTGAACCTTTCACCAGTACCTGCCCTTCAGTCAAAAATGACTCTTGATCAAC
AGCACATTGAAACACCTGGTCAAAATATACCAACTAAAGTAACTTCAGCAGTGGTTGGACCAAGTCATGA
AGTCCAGGAGCAAAGTTCTGGCCCATTCAAGAAACAGTCTGCTACCAATCTTGAATCTGAAGAAGACAGT
GAAGCTCCTGTTGATAGTACATTAAATAATAACAGAAACCAAGAGTTTGTTTCTAGTAGTAGAAGTATAA
GTGGAGAGAATGCTACATCAGAGAGTGAATTTACCTTAGGGGGTGACGACAGTGGTGTGTCAATGAACCC
AGCTAGGAGTGCACTTGCACTGTTGGCCATGGCCCAATCTGGGGATGCAGTCAGTGTCAAGATTGAAGAA
GAAAACCAAGATTTAATGCATTTTAACCTTCAAAAGAAAAGAGCTAAAGGAAAAGGGCAAGTTAAAGAGG
AAGACAACAGTAATCAGAAACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAACAGA
TATTTACTTACCGTATACTCCTCCTTCCTCAGAAAGCTGCCATGATGGTTATCAGCATCAAGAAAAAATG
AGACAGAAGATCAAAGAGGTGGAGGAAAAACAACCAGAAGTCAAAACAGGATTTATTGCTTCTTTCTTAG
ATTTTCTGAAATCCGGGCCCAAGCAGCAGTTTTCCACTCTTGCTGTACGAATGCCTAACAGGACTAGACG
GCCAGGGACCCAGATGGTTCGTACATTTTGTCCCCCACCACTTCCCAAGCCTTCATCTACAACACCCACA
CCTTTAGTGTCTGAAACTGGCGGTAACAGTCCATCAGATAAAGTTGATAATGAACTTAAAAACTTGGAAC
ATTTATCTTCATTTTCTTCTGATGAAGATGATCCTGGATATAGTCAAGATGCTTATAAAAGCGTCTCTAC
TCCCTTAACTACTTTGGATGCTACTTCTGATAAAAAGAAGAAAACAGAAGCCCTACAGGTGGCAACTACT
AGCCCAACTGCCAATACTACTGGTACTGCTACTACTTCCTCAACCACTGTGGGTGCAGTTAAGCAAGAAC
CTCTCCACTCTACTTCATATGCAGTAAATATTCTGGAAAATATAAGCTCTTCAGAATCCTCAAAGCCCAT
TGAACTTGATGGTCTTCCTTCAGACCAGTTTGCAAAAGGACAGGACACTGTTGCCATAGAAGGTTTTACA
GATGAGGAGGACACAGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGATGAATTTGTGGTAAAGATAG
AAGACATAGAGACTTTTAAGGAGGCTTTAAAAACAGGAAAAGAACCTCCAGCTATTTGGAAAGTACAAAA
AGCTTTATTACAGAAATTTGTTCCTGAAATTCGAGATGGTCAAAGAGAATTTGCTGCTACAAATAGTTAT
CTTGGATATTTTGGAGATGCAAAGAGTAAATACAAAAGAATATATGTGAAGTTCATTGAAAATGCAAACA
AGAAGGAATATGTCAGAGTGTGTTCTAAAAAGCCAAGAAATAAACCTTCACAAACTATCAGAACTGTTCA
AGCTAAGCCAAGTAGTAGCAGTAAAACTTCTGATCCTCTAGCATCAAAAACTACAACTACAAAAGCCCCT
TCCGTGAAACCCAAAGTTAAACAGCCAAAAGTAAAGGCTGAGCCACCACCAAAGAAACGGAAAAAATGGA
AAGAAGAATTTTCATCATCCCAATCTGACTCATCTCCTGAGATCCATACTAGTAGTAGTGACGATGAGGA
ATTTGAACCTCCCGCTCCCTTTGTCACTCGCTTTTTGAACACAAGAGCAATGAAGGAAACCTTTAAGAGC
TACATGGAATTGCTTGTTAGCATTGCCTTGGACCCTGACACAATGCAAGCCTTAGAGAAGAGCAATGATG
AGCTACTTTTACCTCATATGAAAAAAATAGATGGCATGCTAAATGATAACCGAAAGAGACTTCTTTTGAA
TCTTCATTTGGATCAATCATTCAAGAATGCTTTGGAAAGTTTTCCTGAACTAACAATAATTACTCGAGAT
TCTAAAGCAAAGAGTGGAGGAACTGCTATTTCTAAAATCAAAATGAATGGCAAAGCCTATAATAAGAAAA
CTCTAAGGACTTCTAAAACAACCACCAAATCTGCACAAGAGTTTGCTGTCGATCCAGAGAAAATACAGTT
GTATTCTTTGTATCATTCACTCCATCATTATAAGTACCATGTTTATCTGATATGTAAGGATGAGATTTCT
TCGGTGCAGAAAAAAAATGAAGATTTAGGACAGGAGGAAATTGTTCAACTTTGTATGAAAAATGTAAAAT
GGGTGGAGGACCTCTTTGAAAAATTTGGAGAACTTCTAAATCATGTACAGCAGAAATGTTCCTGA

Translation (1864 aa):
MDRNYATSGFTEPPPPPPPAPPAAPVPASAAAQPPAPAWAYEPRAAAAAASSSCSSGSCSSGSSPSLKAS
LSYEEGHPSHSETDLLQRQSFAASHQLPGYAPTPQPTGLSGIFDTSVNSASSNTKESSVMNFLSTAESRT
AQAAASGTTLLPQFRAPSWQTGMHSSAATELFATGPLPSTGTLPPSLSAYQHPTTFSNRNFATTSPLVLQ
DSTFNTTSNGILSHHDPLLQIKTSQGTVPTALAFERLGSSVLSNSIPPQSSTYRSAQESAPHLLQPQFSL
LPSALGGSQQTPQAYSSTLFTSSTASIERALLRECSVIKHHQRPSGTQSIQAQLTGSQHSLHSYLSNSSV
VNFQETTRQSSLSCSPIGDSTQVSNGGLQQKTSQVSVELAQSYSSAIPSSGYPPSTTKIKSCSTEQPLTS
TKTPKPQSIIPPVQTLSYSKPLHNQSSVISGQAQIYSTAQLPSLLSVSQSQNYGLVQPHNVPSIVHSQVY
RSSKVEKLPPLYKTLTFSGSSQTVTPENQTLNYSSNQQEVLSSVTNENYPAQTRDLSSVSQSQSYSSGHS
QGLSPVSQTQVSYSSQSQVLSVVSLSESYASGESLTLTAPSLSYSSASRAQNLPDSSPTQNYISMHSSQN
VQTQESSSPQSQKFLPAVQSSSFASSTHCQTLQNNITSPDPKSYAERKLDSDVYPSSKQEDGFPMQELQV
LQPQASLESSTQRLSDGEINAQESTYKVSKADDRYSQSVIRSNSRLEDQVIGVALQASKKEESVVGSVTQ
LNQQIGQVNNAATLDLKNSTNLIQTPQIRLNTKDLKQQHPLILKVHESKVQEQHDQIINASSQIQIPNHA
LGHGHQASLPNTQVLLDSACDLQILQQSILQAGLGQVKASLQAQRVQSPQQIVHPFLQMEGHVIQSNGDH
SQQQLHPQNSEVMKMDLSESSKPLQQHLTTKGHFSETNQHDSKNQFVSLGSMCFPEAVLLSDERNILSNV
DDILAATAAACGVTPTDFSKSTSNETMQAVEDGDSKSHFQQSLDVRHVTSDFNSMTATVGKPQNINDTSL
NGNQVTVNLSPVPALQSKMTLDQQHIETPGQNIPTKVTSAVVGPSHEVQEQSSGPFKKQSATNLESEEDS
EAPVDSTLNNNRNQEFVSSSRSISGENATSESEFTLGGDDSGVSMNPARSALALLAMAQSGDAVSVKIEE
ENQDLMHFNLQKKRAKGKGQVKEEDNSNQKQLKRPAQGKRQNPRGTDIYLPYTPPSSESCHDGYQHQEKM
RQKIKEVEEKQPEVKTGFIASFLDFLKSGPKQQFSTLAVRMPNRTRRPGTQMVRTFCPPPLPKPSSTTPT
PLVSETGGNSPSDKVDNELKNLEHLSSFSSDEDDPGYSQDAYKSVSTPLTTLDATSDKKKKTEALQVATT
SPTANTTGTATTSSTTVGAVKQEPLHSTSYAVNILENISSSESSKPIELDGLPSDQFAKGQDTVAIEGFT
DEEDTESGGEGQYRERDEFVVKIEDIETFKEALKTGKEPPAIWKVQKALLQKFVPEIRDGQREFAATNSY
LGYFGDAKSKYKRIYVKFIENANKKEYVRVCSKKPRNKPSQTIRTVQAKPSSSSKTSDPLASKTTTTKAP
SVKPKVKQPKVKAEPPPKKRKKWKEEFSSSQSDSSPEIHTSSSDDEEFEPPAPFVTRFLNTRAMKETFKS
YMELLVSIALDPDTMQALEKSNDELLLPHMKKIDGMLNDNRKRLLLNLHLDQSFKNALESFPELTIITRD
SKAKSGGTAISKIKMNGKAYNKKTLRTSKTTTKSAQEFAVDPEKIQLYSLYHSLHHYKYHVYLICKDEIS
SVQKKNEDLGQEEIVQLCMKNVKWVEDLFEKFGELLNHVQQKCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH