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Report for CCDS41199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41199.1 Public Mus musculus X Adgrg2 23 108 98 CCDS HistoryNCBI Gene:237175Re-query CCDS DB by CCDS ID:41199.1Re-query CCDS DB by GeneID:237175See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41199.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112404.8 ENSMUSP00000108023.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112404.8Link to Ensembl Protein Viewer:ENSMUSP00000108023.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112404Re-query CCDS DB by Protein ID:ENSMUSP00000108023
Original member Current member NCBI NM_001079848.2 NP_001073317.1 Accepted alive Link to Nucleotide Sequence:NM_001079848.2Link to Protein Sequence:NP_001073317.1Re-query CCDS DB by Nucleotide ID:NM_001079848Re-query CCDS DB by Protein ID:NP_001073317Link to BLAST:NP_001073317.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073317.1 982 Q8CJ12-5 982 100% 0 0

Chromosomal Locations for CCDS 41199.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 160438196 160438313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160461343 160461381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160463328 160463369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160465578 160465631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160468892 160468947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160469768 160469823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160471756 160471795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160472312 160472349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160474704 160474798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160475491 160475557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160477049 160477440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160478985 160479147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160480227 160480383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160481547 160481690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160482289 160482411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483083 160483128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483234 160483337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160484140 160484261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160485644 160485912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160487666 160487765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160488684 160488967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160491398 160491499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160492600 160492752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160496305 160496489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2949 nt):
ATGCTTTTCTCTGGTGGGCAGTACAGCCCTGTTGGCAGACCTGAAGAGGTTTTACTGATATACAAGATAT
TCCTTGTCATCATTTGTTTTCATGTCATTCTCGTTACATCCCTGAAAGATGCTGCTTCAGAAGTTTTGTC
GACTTTAAACAAAACAGAAAAATCTAAAATCACTATAGTAAAAACCTTCAATGCATCAGGAGTCAAATCC
CAGAGAAATATCTGCAATTTGTCATCTCTTTGCAATGACTCAGTATTTTTTAGAGGTGAGATAGTGTTTC
AACATGATGAAGACCACAATGTTACCCAGAATCAAGATACAGCTAATGGCACCTTCGCTGGAGTCCTGTC
TCTAAGTGAACTGAAGCGATCAGAGCTCAACAAAACTCTACAGACCTTAAGTGAGACTTACTTTATAGTG
TGTGCTACAGCAGAGGCCCAAAGCACGGTAAACTGTACATTCACAGTAAAACTCAATGAGACCATGAATG
TGTGTGCCATGATGGTTACTTTCCAAACTGTACAGATTCGGCCAATGGAACAGTGCTGCTGTTCCCCGAG
GACTCCCTGCCCTTCCTCACCAGAAGAGTTAGAAAAACTACAGTGTGAACTGCAGGATCCCATTGTCTGT
CTTGCTGATCAACCGCATGGCCCACCGTTATCGTCTTCCAGCAAGCCTGTTGTACCTCAGGCCACCATTA
TTTCCCATGTTGCTAGTGACTTCTCTTTGGCTGAACCCCTTGATCATGCCCTTATGACCCCAAGCACACC
CTCTCTGACACAAGAAAGTAACCTTCCATCTCCTCAGCCTACGATCCCCCTGGCTTCCAGTCCTGCCACT
GACTTGCCAGTTCAATCTGTAGTGGTCTCTTCTTTGCCTCAAACTGATCTTTCCCACACCCTGTCACCGG
TGCAGTCCTCCATTCCCTCTCCTACCACACCAGCCCCATCTGTCCCTACAGAACTGGTCACCATCAGCAC
ACCTCCTGGTGAGACAGTTGTCAACACTAGCACTGTTTCTGATCTGGAAGCCCAAGTATCCCAGATGGAG
AAAGCTTTGTCTTTGGGTAGCTTAGAGCCTAATCTTGCAGGCGAAATGGTAAACCGAGTCAGCAAACTCC
TTCACTCTCCACCTGCCTTGCTAGCCCCTCTAGCTCAAAGGTTGCTAAAAGTGGTAGATGCCATTGGCTT
ACAGCTGAATTTTTCATCTACAACTATCAGTCTAACTTCACCTTCTTTGGCTCTTGCTGTGATCAGAGTG
AATGCCAGTAATTTCAATACCACGACTTTTGCAGCCCAAGACCCAACAAATCTCCAGGTTTCTCTGGAAA
CCCCACCTCCTGAGAATAGTATTGGTGCCATTACTCTGCCCTCATCACTGATGAATAATTTGCCAGCTAA
TGATGTAGAATTGGCTTCAAGGATTCAGTTCAATTTCTTTGAAACACCCGCCCTGTTTCAGGATCCTTCC
CTGGAGAACCTCACTCTGATAAGCTATGTCATATCATCAAGTGTCACAAACATGACCATCAAGAACTTGA
CAAGAAACGTGACAGTCGCACTGAAACACATCAACCCAAGTCCGGATGACTTAACTGTGAAATGTGTATT
CTGGGACTTGGGCAGAAATGGTGGCAAAGGAGGTTGGTCATCTGATGGCTGTTCCGTCAAAGACAAGAGA
ATGAATGAAACCATCTGTACCTGTAGCCATCTTACAAGTTTTGGCATCCTATTGGACCTATCTCGAACAT
CCTTACCACCAAGTCAAATGATGGCTCTGACATTTATCACGTATATTGGCTGTGGGCTTTCATCAATTTT
TCTGTCAGTTACTCTTGTAACCTACATCGCCTTTGAAAAGATCCGGAGGGATTACCCCTCCAAAATCCTC
ATCCAGCTGTGTGCTGCCCTGCTTCTGCTCAACCTGATCTTCCTCCTAGACTCCTGGATTGCGCTGTATA
ATACCCGAGGTTTCTGCATTGCCGTGGCTGTATTTCTTCACTATTTTCTCTTGGTCTCATTCACATGGAT
GGGATTAGAAGCATTCCACATGTACCTAGCACTGGTCAAGGTGTTTAATACTTACATCCGAAAGTACATC
CTTAAATTCTGCATTGTTGGCTGGGGCATACCAGCTGTGGTTGTGTCCATCGTCCTGACTATATCCCCAG
ATAACTATGGGATTGGATCCTATGGAAAATTCCCCAATGGCACACCAGATGACTTTTGCTGGATCAACAG
CAATGTGGTGTTCTATATCACGGTTGTGGGATATTTCTGTGTGATATTTCTACTGAACGTCAGCATGTTC
ATCGTGGTCTTGGTTCAGCTCTGTCGAATTAAAAAGAAGAAGCAGCTGGGAGCCCAGCGCAAAACTAGTA
TTCAAGACCTCAGGAGTATCGCTGGCCTCACATTTTTACTGGGAATTACTTGGGGCTTTGCCTTCTTTGC
CTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACCTTACAAGGGTTTTTCATA
TTCATTTTTTACTGTGCAGCAAAAGAGAATGTCAGAAAACAGTGGAGGCGGTATCTTTGTTGTGGAAAAT
TACGGCTGGCTGAAAATTCTGACTGGAGTAAAACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAACCA
AGGAGTATCCAGCTCTTCAAATTCCTTACAGTCAAGCTGTAACTCCACTAACTCCACCACACTCCTAGTG
AATAGTGATTGCTCAGTGCACGCAAGCGGGAATGGCAATGCATCTACCGAGAGGAATGGGGTTTCTTTCA
GTGTTCAGAATGGAGACGTGTGCCTTCATGATCTCACTGGCAAACAGCATATGTTTAGTGACAAAGAGGA
CTCCTGCAATGGTAAAAGCCGGATAGCGCTCAGAAGGACTTCGAAGCGGGGAAGCTTACACTTTATCGAG
CAAATGTGA

Translation (982 aa):
MLFSGGQYSPVGRPEEVLLIYKIFLVIICFHVILVTSLKDAASEVLSTLNKTEKSKITIVKTFNASGVKS
QRNICNLSSLCNDSVFFRGEIVFQHDEDHNVTQNQDTANGTFAGVLSLSELKRSELNKTLQTLSETYFIV
CATAEAQSTVNCTFTVKLNETMNVCAMMVTFQTVQIRPMEQCCCSPRTPCPSSPEELEKLQCELQDPIVC
LADQPHGPPLSSSSKPVVPQATIISHVASDFSLAEPLDHALMTPSTPSLTQESNLPSPQPTIPLASSPAT
DLPVQSVVVSSLPQTDLSHTLSPVQSSIPSPTTPAPSVPTELVTISTPPGETVVNTSTVSDLEAQVSQME
KALSLGSLEPNLAGEMVNRVSKLLHSPPALLAPLAQRLLKVVDAIGLQLNFSSTTISLTSPSLALAVIRV
NASNFNTTTFAAQDPTNLQVSLETPPPENSIGAITLPSSLMNNLPANDVELASRIQFNFFETPALFQDPS
LENLTLISYVISSSVTNMTIKNLTRNVTVALKHINPSPDDLTVKCVFWDLGRNGGKGGWSSDGCSVKDKR
MNETICTCSHLTSFGILLDLSRTSLPPSQMMALTFITYIGCGLSSIFLSVTLVTYIAFEKIRRDYPSKIL
IQLCAALLLLNLIFLLDSWIALYNTRGFCIAVAVFLHYFLLVSFTWMGLEAFHMYLALVKVFNTYIRKYI
LKFCIVGWGIPAVVVSIVLTISPDNYGIGSYGKFPNGTPDDFCWINSNVVFYITVVGYFCVIFLLNVSMF
IVVLVQLCRIKKKKQLGAQRKTSIQDLRSIAGLTFLLGITWGFAFFAWGPVNVTFMYLFAIFNTLQGFFI
FIFYCAAKENVRKQWRRYLCCGKLRLAENSDWSKTATNGLKKQTVNQGVSSSSNSLQSSCNSTNSTTLLV
NSDCSVHASGNGNASTERNGVSFSVQNGDVCLHDLTGKQHMFSDKEDSCNGKSRIALRRTSKRGSLHFIE
QM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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