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Report for CCDS411.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
411.1 Public Homo sapiens 1 MRPS15 24 110 108 CCDS HistoryNCBI Gene:64960Re-query CCDS DB by CCDS ID:411.1Re-query CCDS DB by GeneID:64960See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 411.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373116.6 ENSP00000362208.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373116.6Link to Ensembl Protein Viewer:ENSP00000362208.5Re-query CCDS DB by Nucleotide ID:ENST00000373116Re-query CCDS DB by Protein ID:ENSP00000362208
Original member Current member NCBI NM_031280.4 NP_112570.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031280.4Link to Protein Sequence:NP_112570.2Re-query CCDS DB by Nucleotide ID:NM_031280Re-query CCDS DB by Protein ID:NP_112570Link to BLAST:NP_112570.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112570.2 257 P82914 257 100% 0 0

Chromosomal Locations for CCDS 411.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 36455788 36455925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36456187 36456378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36457923 36457981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36460692 36460776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36461264 36461312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36462088 36462163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36463806 36463850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36464146 36464275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGCTGAGGGTCGCGTGGAGGACGCTGAGTTTGATTCGGACCCGGGCAGTTACCCAGGTCCTAGTACCCG
GGCTGCCGGGCGGTGGGAGCGCCAAGTTTCCTTTCAACCAGTGGGGCCTGCAGCCTCGAAGTCTCCTCCT
CCAGGCCGCGCGCGGATATGTCGTCCGGAAACCAGCCCAGTCTAGGCTGGATGATGACCCACCTCCCTCT
ACGCTGCTCAAAGACTACCAGAATGTCCCTGGAATTGAGAAGGTTGATGATGTCGTGAAAAGACTCTTGT
CTTTGGAAATGGCCAACAAGAAGGAGATGCTAAAAATCAAGCAAGAACAGTTTATGAAGAAGATTGTTGC
AAACCCAGAGGACACCAGATCCCTGGAGGCTCGAATTATTGCCTTGTCTGTCAAGATCCGCAGTTATGAA
GAACACTTGGAGAAACATCGAAAGGACAAAGCCCACAAACGCTATCTGCTAATGAGCATTGACCAGAGGA
AAAAGATGCTCAAAAACCTCCGTAACACCAACTATGATGTCTTTGAGAAGATATGCTGGGGGCTGGGAAT
TGAGTACACCTTCCCCCCTCTGTATTACCGAAGAGCCCACCGCCGATTCGTGACCAAGAAGGCTCTGTGC
ATTCGGGTTTTCCAGGAGACTCAAAAGCTGAAGAAGCGAAGAAGAGCCTTAAAGGCTGCAGCAGCAGCCC
AAAAACAAGCAAAGCGGAGGAACCCAGACAGCCCTGCCAAAGCCATACCAAAGACACTCAAAGACAGCCA
ATAA

Translation (257 aa):
MLRVAWRTLSLIRTRAVTQVLVPGLPGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQSRLDDDPPPS
TLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYE
EHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEKICWGLGIEYTFPPLYYRRAHRRFVTKKALC
IRVFQETQKLKKRRRALKAAAAAQKQAKRRNPDSPAKAIPKTLKDSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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