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Report for CCDS41097.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41097.1 Public Mus musculus X Atp7a 23 108 98 CCDS HistoryNCBI Gene:11977Re-query CCDS DB by CCDS ID:41097.1Re-query CCDS DB by GeneID:11977See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41097.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113557.7 ENSMUSP00000109186.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113557.7Link to Ensembl Protein Viewer:ENSMUSP00000109186.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113557Re-query CCDS DB by Protein ID:ENSMUSP00000109186
Original member Current member NCBI NM_009726.5 NP_033856.3 Accepted alive Link to Nucleotide Sequence:NM_009726.5Link to Protein Sequence:NP_033856.3Re-query CCDS DB by Nucleotide ID:NM_009726Re-query CCDS DB by Protein ID:NP_033856Link to BLAST:NP_033856.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033856.3 1491 Q64430 1491 100% 0 0

Chromosomal Locations for CCDS 41097.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 106069788 106069907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106085114 106085603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106086089 106086814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106088338 106088517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106092084 106092247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106094853 106095014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106096777 106096853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106097390 106097615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106098786 106099019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106100527 106100618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106101860 106101987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106102347 106102501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106102712 106102846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106105147 106105341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106107184 106107366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106109761 106109977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106115090 106115236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106118252 106118394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106120235 106120438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106121590 106121707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106123343 106123445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106124339 106124615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4476 nt):
ATGGAGCCAAGTGTGGATGCAAATTCAATTACTATCACTGTTGAGGGAATGACATGTATTTCCTGTGTCC
GGACCATTGAACAGCAGATTGGGAAAGTGAATGGTGTCCATCACATTAAAGTTTCACTAGAAGAAAAGAG
TGCAACCATTATTTATGACCCTAAACTTCAGACTCCAAAGACCCTCCAAGAAGCTATCGATGACATGGGC
TTTGATGCTCTTCTCCACAATGCTAACCCCCTCCCTGTCTTAACCAATACCGTGTTCCTGACTGTTACTG
CTCCACTGACTCTGCCTTGGGACCATATCCAAAGTACATTGCTCAAGACCAAGGGTGTGACTGGTGTTAA
GATTTCCCCTCAGCAAAGAAGTGCAGTAGTCACCATAATTCCATCTGTGGTGAGTGCCAGTCAGATTGTG
GAGCTGGTCCCAGACCTCAGTTTAGACATGGGAACTCAGGAGAAAAAGTCAGGAGCTTGTGAAGAGCACA
GCACGCCTCAGGCAGGGGAAGTCATGCTGAAGATGAAAGTGGAAGGGATGACCTGCCATTCATGTACTAG
CACCATTGAAGGAAAAGTTGGAAAGCTGCAAGGTGTTCAGCGCATTAAAGTGTCCCTAGACAACCAAGAA
GCTACTATTGTTTTTCAACCTCATCTCATCACAGCAGAGGAAATAAAGAAGCAGATTGAAGCCGTGGGTT
TCCCAGCCTTCATAAAAAAGCAGCCGAAGTACCTCAAATTGGGAGCCATTGATGTTGAGCGCCTGAAGAA
CACACCGGTCAAATCTTCAGAAGGATCTCAGCAAAAGAGCCCATCATATCCCAGTGACTCCACAACCATG
TTCACCATAGAGGGCATGCATTGTAAATCGTGTGTGTCCAATATTGAAAGTGCTTTATCTACACTCCAGT
ATGTAAGCAGTATAGTAGTTTCTTTAGAGAATAGGTCAGCCATTGTAAAGTACAATGCAAGCTTAGTCAC
TCCAGAAATGCTGAGAAAGGCAATAGAGGCCATTTCACCGGGGCAATACAGAGTTAGTATTGCAAGTGAA
GTTGAAAGTACCGCCAGCTCTCCCTCCAGCTCATCTCTTCAGAAGATGCCTTTGAACATAGTTAGCCAGC
CTCTGACCCAAGAAGCTGTGATAAACATAAATGGCATGACTTGTAATTCTTGTGTGCAGTCTATAGAGGG
TGTAATATCAAAAAAGCCAGGTGTAAAATCCATCCACGTGTCCCTCGCAAACAGCACAGGGACTATTGAA
TTTGATCCTCTACTAACCTCTCCAGAAACCTTGCGAGAAGCAATTGAAGACATGGGATTTGATGCTGCCT
TGCCAGACATGAAAGAGCCACTGGTAGTGATAGCTCAGCCCTCACTGGAAACACCTCTTTTGCCCTCAAG
TAATGAGCTAGAAAATGTGATGACGTCAGTTCAGAACAAGTGTTACATACAGGTCTCTGGGATGACCTGT
GCTTCTTGTGTAGCAAACATTGAACGCAATTTAAGACGAGAAGAAGGAATATATTCTGTACTTGTTGCCC
TAATGGCTGGCAAGGCAGAAGTAAGATATAACCCAGCTGTTATCCAACCCCGAGTGATAGCAGAGTTTAT
TCGAGAGCTTGGATTTGGAGCTATGGTGATGGAAAACGCTGGGGAAGGCAACGGCATCTTGGAACTTGTT
GTGAGAGGAATGACGTGTGCTTCCTGTGTCCATAAAATTGAATCAACACTCACAAAACACAAAGGGATCT
TCTACTGCTCTGTGGCCCTGGCAACTAACAAAGCACATATTAAATATGATCCAGAAATTATTGGTCCCAG
AGATATTATCCATACCATCGGAAGCTTAGGCTTTGAAGCTTCTTTGGTCAAGAAAGATCGATCAGCCAAC
CACTTAGATCATAAACGAGAAATAAAACAATGGAGAGGGTCTTTCCTTGTGAGCCTGTTTTTCTGTATCC
CTGTAATGGGACTGATGGTCTATATGATGGTTATGGATCACCACCTTGCAACTCTTCACCATAATCAGAA
CATGAGTAATGAAGAAATGATCAACATGCATTCTGCTATGTTTCTGGAGCGTCAGATCCTGCCAGGACTG
TCCATTATGAATTTGTTGTCCCTTTTATTGTGTCTACCTGTACAGTTTTGTGGCGGCTGGTACTTCTACA
TTCAGGCTTACAAAGCACTGAAGCATAAGACAGCAAACATGGATGTGCTGATTGTGCTGGCAACCACCAT
CGCATTTGCCTACTCTCTGGTTATTCTTCTGGTTGCAATGTTTGAGAGAGCCAAAGTGAACCCCATTACC
TTCTTTGATACACCTCCTATGCTGTTTGTGTTTATTGCACTAGGACGATGGCTGGAACATATAGCGAAGG
GCAAAACCTCCGAGGCTCTTGCAAAGCTAATTTCATTACAAGCAACTGAAGCCACTATTGTAACTCTGAA
CTCTGAAAATCTCCTCCTGAGTGAAGAACAAGTGGATGTGGAACTTGTACAACGTGGAGATATCATTAAG
GTTGTTCCAGGAGGCAAATTTCCAGTGGATGGCCGTGTTATTGAAGGACATTCTATGGTGGACGAGTCCC
TCATCACAGGGGAGGCAATGCCTGTGGCTAAGAAACCTGGCAGCACGGTGATTGCAGGTTCCATTAACCA
GAATGGATCTCTCCTCATCCGAGCAACACATGTGGGAGCAGATACAACCCTTTCTCAGATCGTCAAACTT
GTGGAGGAGGCACAGACATCAAAGGCTCCTATCCAGCAGTTTGCAGACAAACTCAGTGGCTACTTTGTTC
CTTTCATCGTCTTGGTTTCCATTGTTACCCTCTTGGTGTGGATTATAATTGGATTTCAAAATTTTGAAAT
TGTGGAAACCTACTTTCCCGGCTATAATAGAAGCATCTCCCGAACAGAAACCATAATACGCTTTGCTTTC
CAAGCCTCTATCACGGTTCTGTGTATCGCATGTCCCTGTTCACTGGGACTAGCCACTCCAACTGCTGTGA
TGGTGGGCACAGGAGTAGGTGCTCAGAATGGCATACTTATCAAAGGTGGGGAGCCACTGGAAATGGCTCA
TAAGGTAAAGGTAGTGGTATTTGATAAGACTGGAACCATCACCCATGGAACCCCAGTAGTGAATCAAGTG
AAGGTTCTCGTGGAAAGTAACAAGATATCACGCAATAAGATCCTGGCCATTGTGGGGACTGCAGAAAGTA
ACAGTGAACATCCTTTAGGAGCAGCTGTAACCAAATATTGCAAAAAGGAGCTGGACACTGAAACCCTGGG
TACCTGTACAGATTTCCAGGTTGTACCAGGCTGTGGTATTAGCTGTAAAGTCACCAATATTGAAGGTTTG
CTACATAAGAGTAACTTGAAGATAGAAGAAAATAACATTAAAAATGCATCCCTGGTTCAAATTGATGCAA
TTAATGAACAGTCATCAACTTCATCTTCTATGATTATTGATGCTCATCTCTCAAATGCTGTTAATACTCA
GCAGTACAAAGTCCTCATTGGTAACCGGGAATGGATGATTAGAAATGGTCTTGTCATAAGTAATGATGTA
GATGAATCTATGATTGAACATGAAAGAAGAGGTCGGACTGCTGTCTTGGTGACAATCGATGATGAGCTGT
GTGGCTTGATTGCTATTGCTGATACTGTGAAACCTGAGGCCGAGTTGGCTGTACACATTCTGAAATCTAT
GGGTTTAGAAGTAGTTCTGATGACTGGAGACAACAGTAAAACTGCTCGGTCTATTGCTTCTCAGGTTGGC
ATTACTAAGGTGTTTGCTGAAGTTCTACCTTCCCACAAAGTTGCTAAGGTGAAGCAGCTCCAAGAGGAGG
GCAAACGTGTAGCAATGGTAGGAGATGGAATCAATGACTCCCCAGCTCTGGCAATGGCAAACGTTGGAAT
TGCCATAGGCACAGGCACAGATGTAGCCATTGAAGCAGCTGATGTGGTTTTGATAAGGAATGACCTTCTG
GATGTTGTGGCAAGTATTGACTTGTCAAGGAAAACAGTCAAGAGGATTCGAATCAATTTTGTCTTTGCTC
TAATTTATAATCTGGTTGGAATTCCCATCGCTGCTGGAGTTTTCCTGCCCATCGGTTTGGTTTTACAACC
CTGGATGGGATCCGCAGCAATGGCCGCTTCATCTGTCTCTGTAGTCCTTTCTTCCCTTTTCCTCAAGCTT
TACAGGAAACCTACGTATGACAATTATGAGTTGCATCCCCGGAGCCACACAGGACAGAGGAGTCCTTCAG
AAATCAGTGTTCACGTTGGAATAGATGACACCTCAAGAAATTCTCCAAGGCTGGGTTTGCTGGACCGGAT
TGTCAACTATAGCAGAGCCTCCATAAATTCACTGCTGTCTGACAAGCGCTCCCTGAACAGCGTTGTTACT
AGTGAACCTGACAAGCACTCGCTTCTGGTGGGCGACTTCCGGGAAGATGATGACACCACACTGTAA

Translation (1491 aa):
MEPSVDANSITITVEGMTCISCVRTIEQQIGKVNGVHHIKVSLEEKSATIIYDPKLQTPKTLQEAIDDMG
FDALLHNANPLPVLTNTVFLTVTAPLTLPWDHIQSTLLKTKGVTGVKISPQQRSAVVTIIPSVVSASQIV
ELVPDLSLDMGTQEKKSGACEEHSTPQAGEVMLKMKVEGMTCHSCTSTIEGKVGKLQGVQRIKVSLDNQE
ATIVFQPHLITAEEIKKQIEAVGFPAFIKKQPKYLKLGAIDVERLKNTPVKSSEGSQQKSPSYPSDSTTM
FTIEGMHCKSCVSNIESALSTLQYVSSIVVSLENRSAIVKYNASLVTPEMLRKAIEAISPGQYRVSIASE
VESTASSPSSSSLQKMPLNIVSQPLTQEAVININGMTCNSCVQSIEGVISKKPGVKSIHVSLANSTGTIE
FDPLLTSPETLREAIEDMGFDAALPDMKEPLVVIAQPSLETPLLPSSNELENVMTSVQNKCYIQVSGMTC
ASCVANIERNLRREEGIYSVLVALMAGKAEVRYNPAVIQPRVIAEFIRELGFGAMVMENAGEGNGILELV
VRGMTCASCVHKIESTLTKHKGIFYCSVALATNKAHIKYDPEIIGPRDIIHTIGSLGFEASLVKKDRSAN
HLDHKREIKQWRGSFLVSLFFCIPVMGLMVYMMVMDHHLATLHHNQNMSNEEMINMHSAMFLERQILPGL
SIMNLLSLLLCLPVQFCGGWYFYIQAYKALKHKTANMDVLIVLATTIAFAYSLVILLVAMFERAKVNPIT
FFDTPPMLFVFIALGRWLEHIAKGKTSEALAKLISLQATEATIVTLNSENLLLSEEQVDVELVQRGDIIK
VVPGGKFPVDGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLIRATHVGADTTLSQIVKL
VEEAQTSKAPIQQFADKLSGYFVPFIVLVSIVTLLVWIIIGFQNFEIVETYFPGYNRSISRTETIIRFAF
QASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQV
KVLVESNKISRNKILAIVGTAESNSEHPLGAAVTKYCKKELDTETLGTCTDFQVVPGCGISCKVTNIEGL
LHKSNLKIEENNIKNASLVQIDAINEQSSTSSSMIIDAHLSNAVNTQQYKVLIGNREWMIRNGLVISNDV
DESMIEHERRGRTAVLVTIDDELCGLIAIADTVKPEAELAVHILKSMGLEVVLMTGDNSKTARSIASQVG
ITKVFAEVLPSHKVAKVKQLQEEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRNDLL
DVVASIDLSRKTVKRIRINFVFALIYNLVGIPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLFLKL
YRKPTYDNYELHPRSHTGQRSPSEISVHVGIDDTSRNSPRLGLLDRIVNYSRASINSLLSDKRSLNSVVT
SEPDKHSLLVGDFREDDDTTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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