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Report for CCDS4052.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4052.1 Public Homo sapiens 5 RASGRF2 24 110 108 CCDS HistoryNCBI Gene:5924Re-query CCDS DB by CCDS ID:4052.1Re-query CCDS DB by GeneID:5924See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4052.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265080.9 ENSP00000265080.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265080.9Link to Ensembl Protein Viewer:ENSP00000265080.4Re-query CCDS DB by Nucleotide ID:ENST00000265080Re-query CCDS DB by Protein ID:ENSP00000265080
Original member Current member NCBI NM_006909.3 NP_008840.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006909.3Link to Protein Sequence:NP_008840.1Re-query CCDS DB by Nucleotide ID:NM_006909Re-query CCDS DB by Protein ID:NP_008840Link to BLAST:NP_008840.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008840.1 1237 O14827 1237 100% 0 0

Chromosomal Locations for CCDS 4052.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 80960739 80961026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81042877 81042983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81068032 81068179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81070492 81070581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81073199 81073452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81080121 81080200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81080596 81080789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81085802 81085911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81086835 81086953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81092801 81092961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81094296 81094362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81094856 81094992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81108996 81109078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81112610 81112858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81113538 81113920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81123642 81123767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81127074 81127163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81180175 81180281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81201330 81201442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81206845 81206905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81207246 81207349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81208354 81208438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81212366 81212563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81215876 81215955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81217356 81217473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81219710 81219778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81225678 81225770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3714 nt):
ATGCAGAAGAGCGTGCGCTACAACGAGGGGCACGCCCTGTACCTGGCCTTTCTGGCGCGCAAGGAGGGCA
CCAAGCGCGGCTTCCTGAGTAAGAAGACGGCCGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGCCCTCTA
CCAGAATGTGCTCTTCTACTTCGAGGGCGAGCAGAGCTGCCGCCCGGCGGGCATGTACCTCCTGGAGGGC
TGCAGCTGCGAACGAACGCCCGCGCCACCCAGGGCCGGCGCCGGGCAGGGAGGCGTCCGAGACGCGCTGG
ACAAGCAGTATTACTTTACTGTTCTTTTTGGCCATGAAGGTCAGAAGCCACTGGAGCTGCGCTGTGAGGA
GGAGCAGGATGGTAAAGAGTGGATGGAGGCCATTCACCAAGCCAGTTATGCAGACATTTTGATTGAGAGG
GAAGTATTAATGCAGAAGTACATTCATCTAGTTCAGATCGTAGAGACAGAAAAAATTGCAGCTAACCAAC
TCCGACATCAACTTGAAGATCAAGACACAGAAATCGAAAGGCTTAAATCAGAGATTATTGCTCTTAATAA
AACCAAAGAACGAATGCGACCTTACCAAAGCAACCAAGAAGACGAAGATCCAGACATCAAGAAGATTAAA
AAGGTTCAGAGCTTCATGCGAGGATGGTTGTGCAGAAGGAAATGGAAGACCATCGTGCAGGATTACATTT
GTTCTCCTCATGCTGAAAGTATGAGGAAGAGAAACCAGATTGTGTTCACCATGGTGGAGGCAGAGTCAGA
GTACGTTCACCAGCTCTACATCCTGGTCAATGGCTTTCTCCGGCCCCTGCGTATGGCCGCCAGCTCCAAG
AAGCCCCCCATCAGCCACGACGACGTCAGCAGTATTTTTCTTAACAGTGAAACAATCATGTTTCTTCATG
AAATATTTCATCAAGGACTAAAGGCAAGGATAGCAAACTGGCCCACTTTAATTTTAGCTGATCTGTTTGA
TATTTTGCTCCCCATGCTGAACATTTATCAAGAATTTGTGCGTAATCACCAGTACAGCCTGCAAGTTCTC
GCCAATTGTAAGCAAAACAGAGATTTTGACAAACTCTTAAAACAGTATGAAGCCAATCCAGCCTGTGAGG
GGAGGATGCTGGAGACATTCTTGACCTATCCCATGTTTCAGATCCCCAGATATATCATCACACTCCATGA
GCTCCTTGCTCACACACCCCATGAGCATGTGGAAAGGAAAAGCCTGGAGTTTGCCAAATCAAAGCTAGAG
GAACTATCCAGAGTAATGCACGATGAAGTCAGCGACACTGAAAACATAAGGAAAAACCTTGCCATCGAAA
GAATGATCGTGGAGGGCTGTGACATCTTGCTGGACACCAGCCAAACGTTCATCCGCCAAGGTTCTCTTAT
TCAAGTACCTTCCGTTGAGAGGGGGAAACTTAGTAAAGTTCGCCTGGGTTCGTTGTCTTTGAAAAAGGAA
GGAGAGAGACAATGCTTCTTATTTACAAAACACTTTTTAATATGTACAAGAAGTTCAGGAGGGAAGCTTC
ATCTGCTCAAGACAGGTGGGGTTCTGTCTCTAATAGACTGCACATTGATTGAGGAGCCAGATGCAAGCGA
TGATGACTCTAAAGGTTCTGGGCAAGTGTTTGGGCACCTGGATTTTAAAATAGTGGTGGAGCCTCCTGAC
GCTGCCGCCTTCACTGTTGTCTTGTTAGCACCCTCACGCCAGGAGAAAGCTGCCTGGATGAGTGACATCA
GTCAGTGTGTGGACAATATACGATGTAATGGTTTAATGACTATAGTGTTTGAAGAGAATTCCAAAGTCAC
TGTGCCACATATGATTAAGTCTGATGCCCGTCTTCATAAAGACGACACTGACATTTGCTTCAGTAAAACA
CTCAACTCCTGCAAAGTGCCCCAGATCCGTTATGCCAGCGTGGAGCGCCTCTTGGAACGACTGACAGACT
TGCGGTTTCTTAGTATTGATTTCCTCAACACCTTTCTGCACACCTATCGTATTTTCACTACTGCCGCTGT
GGTGCTGGGGAAACTCTCCGACATATACAAGAGGCCTTTCACCTCCATCCCTGTCAGGTCATTGGAATTG
TTTTTTGCTACCAGCCAGAACAACAGAGGTGAACATTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCA
AATTCTCTTCCCCGCCACCACTGGCTGTGTCCAGAACATCTTCCCCAGTGAGGGCCAGAAAGCTGTCTTT
GACTTCTCCCTTGAACTCAAAGATAGGAGCATTGGACCTGACAACTTCCAGCAGTCCCACCACCACCACC
CAGAGTCCCGCTGCGTCTCCACCACCACACACTGGTCAGATACCACTGGATCTCAGCAGAGGCCTCTCTT
CTCCAGAGCAAAGCCCGGGAACGGTAGAAGAGAATGTCGATAACCCACGCGTGGATCTGTGTAACAAGCT
AAAACGAAGTATTCAAAAAGCAGTCCTAGAGTCTGCACCAGCGGACCGAGCAGGAGTGGAAAGCTCCCCT
GCAGCGGACACCACAGAACTTTCACCTTGCAGATCCCCCTCAACTCCTCGGCACCTCCGCTATCGACAGC
CTGGAGGACAGACGGCGGACAATGCCCACTGCTCTGTTTCACCGGCTTCTGCTTTTGCAATAGCCACAGC
TGCAGCAGGACATGGGAGTCCACCAGGCTTTAACAACACCGAGAGAACATGTGATAAAGAGTTTATTATA
CGGAGAACGGCTACCAATCGAGTTCTGAACGTCCTCCGTCACTGGGTCTCAAAGCACGCACAGGATTTCG
AACTCAACAATGAACTAAAGATGAATGTCCTAAATTTGCTAGAAGAAGTTTTGCGAGACCCAGACCTTCT
TCCCCAAGAAAGGAAAGCCGCCGCGAATATCCTCAGGGCCCTTTCACAAGATGACCAAGATGACATCCAC
CTAAAATTAGAGGATATAATTCAAATGACTGACTGCATGAAGGCCGAATGCTTTGAGTCCTTGTCGGCCA
TGGAGCTGGCAGAACAGATCACCCTCCTGGACCATGTCATTTTCAGAAGCATTCCCTACGAGGAGTTTCT
TGGGCAGGGGTGGATGAAGCTGGATAAAAACGAAAGAACTCCTTACATTATGAAAACCAGCCAACACTTC
AATGACATGAGTAACCTGGTGGCCTCCCAGATAATGAACTATGCTGATGTCAGCTCCCGTGCCAACGCCA
TCGAGAAATGGGTGGCAGTGGCGGACATCTGCCGATGCCTGCACAACTACAACGGCGTGCTGGAGATCAC
CTCGGCCTTAAACAGAAGTGCCATCTACAGGCTGAAGAAAACCTGGGCCAAGGTCTCTAAGCAGACAAAA
GCTCTAATGGACAAACTTCAAAAGACTGTTTCCTCTGAAGGAAGATTTAAAAATCTTAGAGAAACCCTTA
AAAATTGTAACCCTCCTGCAGTTCCTTATCTTGGGATGTACTTGACAGACCTGGCATTTATTGAAGAAGG
AACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTCTCCAAAATGAGAATGATATCACACATCATCAGA
GAGATACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTTG
ACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACTAAAAATTGAACCTCGACTCCCTGC
TTGA

Translation (1237 aa):
MQKSVRYNEGHALYLAFLARKEGTKRGFLSKKTAEASRWHEKWFALYQNVLFYFEGEQSCRPAGMYLLEG
CSCERTPAPPRAGAGQGGVRDALDKQYYFTVLFGHEGQKPLELRCEEEQDGKEWMEAIHQASYADILIER
EVLMQKYIHLVQIVETEKIAANQLRHQLEDQDTEIERLKSEIIALNKTKERMRPYQSNQEDEDPDIKKIK
KVQSFMRGWLCRRKWKTIVQDYICSPHAESMRKRNQIVFTMVEAESEYVHQLYILVNGFLRPLRMAASSK
KPPISHDDVSSIFLNSETIMFLHEIFHQGLKARIANWPTLILADLFDILLPMLNIYQEFVRNHQYSLQVL
ANCKQNRDFDKLLKQYEANPACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLE
ELSRVMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFIRQGSLIQVPSVERGKLSKVRLGSLSLKKE
GERQCFLFTKHFLICTRSSGGKLHLLKTGGVLSLIDCTLIEEPDASDDDSKGSGQVFGHLDFKIVVEPPD
AAAFTVVLLAPSRQEKAAWMSDISQCVDNIRCNGLMTIVFEENSKVTVPHMIKSDARLHKDDTDICFSKT
LNSCKVPQIRYASVERLLERLTDLRFLSIDFLNTFLHTYRIFTTAAVVLGKLSDIYKRPFTSIPVRSLEL
FFATSQNNRGEHLVDGKSPRLCRKFSSPPPLAVSRTSSPVRARKLSLTSPLNSKIGALDLTTSSSPTTTT
QSPAASPPPHTGQIPLDLSRGLSSPEQSPGTVEENVDNPRVDLCNKLKRSIQKAVLESAPADRAGVESSP
AADTTELSPCRSPSTPRHLRYRQPGGQTADNAHCSVSPASAFAIATAAAGHGSPPGFNNTERTCDKEFII
RRTATNRVLNVLRHWVSKHAQDFELNNELKMNVLNLLEEVLRDPDLLPQERKAAANILRALSQDDQDDIH
LKLEDIIQMTDCMKAECFESLSAMELAEQITLLDHVIFRSIPYEEFLGQGWMKLDKNERTPYIMKTSQHF
NDMSNLVASQIMNYADVSSRANAIEKWVAVADICRCLHNYNGVLEITSALNRSAIYRLKKTWAKVSKQTK
ALMDKLQKTVSSEGRFKNLRETLKNCNPPAVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMRMISHIIR
EIRQFQQTSYRIDHQPKVAQYLLDKDLIIDEDTLYELSLKIEPRLPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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