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Report for CCDS3530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3530.1 Public Homo sapiens 4 SULT1B1 24 110 108 CCDS HistoryNCBI Gene:27284Re-query CCDS DB by CCDS ID:3530.1Re-query CCDS DB by GeneID:27284See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3530.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310613.8 ENSP00000308770.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310613.8Link to Ensembl Protein Viewer:ENSP00000308770.2Re-query CCDS DB by Nucleotide ID:ENST00000310613Re-query CCDS DB by Protein ID:ENSP00000308770
Original member Current member NCBI NM_014465.4 NP_055280.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014465.4Link to Protein Sequence:NP_055280.2Re-query CCDS DB by Nucleotide ID:NM_014465Re-query CCDS DB by Protein ID:NP_055280Link to BLAST:NP_055280.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055280.2 296 O43704 296 100% 0 0

Chromosomal Locations for CCDS 3530.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 69727088 69727200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69730501 69730681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69733413 69733507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69734138 69734264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69749721 69749818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69754670 69754798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69755070 69755217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGCTTTCCCCAAAAGATATTCTGCGAAAAGATCTGAAGTTGGTCCATGGTTATCCCATGACCTGTGCTT
TTGCAAGCAACTGGGAAAAAATTGAACAGTTCCATAGCAGACCAGATGACATTGTGATAGCCACTTATCC
TAAATCAGGTACTACTTGGGTTAGTGAAATTATAGACATGATTCTAAATGATGGAGATATTGAAAAATGT
AAGCGAGGTTTTATTACTGAAAAAGTTCCAATGTTGGAAATGACTCTCCCTGGATTAAGAACATCAGGTA
TAGAACAATTGGAGAAGAATCCATCACCCCGGATTGTGAAAACACATCTACCGACTGATCTTCTTCCTAA
ATCTTTCTGGGAAAACAATTGCAAGATGATTTATCTGGCTCGTAATGCCAAGGATGTTTCAGTCTCATAT
TACCATTTTGACTTAATGAATAATTTACAGCCTTTTCCTGGTACCTGGGAAGAATATCTGGAGAAATTCT
TAACTGGAAAAGTGGCCTATGGTTCCTGGTTTACTCATGTTAAAAACTGGTGGAAGAAAAAGGAAGAACA
CCCAATACTTTTTTTGTACTATGAAGATATGAAAGAGAATCCAAAGGAGGAAATCAAGAAGATCATTAGA
TTTCTAGAGAAGAACCTGAATGATGAGATCTTGGATAGGATCATCCATCACACCTCATTTGAAGTGATGA
AGGACAATCCTTTGGTAAATTATACACATCTACCAACTACAGTGATGGATCATAGCAAATCCCCTTTTAT
GCGTAAAGGGACGGCTGGTGACTGGAAGAATTACTTCACCGTGGCCCAAAATGAGAAATTTGATGCTATT
TATGAGACAGAAATGTCCAAAACTGCACTTCAATTCCGCACAGAGATTTAA

Translation (296 aa):
MLSPKDILRKDLKLVHGYPMTCAFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKC
KRGFITEKVPMLEMTLPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSY
YHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKKKEEHPILFLYYEDMKENPKEEIKKIIR
FLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTHLPTTVMDHSKSPFMRKGTAGDWKNYFTVAQNEKFDAI
YETEMSKTALQFRTEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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