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Report for CCDS35196.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35196.1 Public Homo sapiens X ARSD 24 110 108 CCDS HistoryNCBI Gene:414Re-query CCDS DB by CCDS ID:35196.1Re-query CCDS DB by GeneID:414See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35196.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381154.6 ENSP00000370546.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381154.6Link to Ensembl Protein Viewer:ENSP00000370546.1Re-query CCDS DB by Nucleotide ID:ENST00000381154Re-query CCDS DB by Protein ID:ENSP00000370546
Original member Current member NCBI NM_001669.4 NP_001660.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001669.4Link to Protein Sequence:NP_001660.2Re-query CCDS DB by Nucleotide ID:NM_001669Re-query CCDS DB by Protein ID:NP_001660Link to BLAST:NP_001660.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001660.2 593 P51689-1 593 100% 0 0

Chromosomal Locations for CCDS 35196.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 2907271 2907632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2908721 2908842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2909817 2909979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2910659 2910793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2915556 2915692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2917804 2918227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2920601 2920723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2921903 2922024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2925616 2925765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 2929232 2929275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1782 nt):
ATGCGATCCGCCGCGCGGAGGGGACGCGCCGCGCCCGCCGCCAGGGACTCTTTGCCGGTGCTACTGTTTT
TATGCTTGCTTCTGAAGACGTGTGAACCTAAAACTGCAAATGCCTTTAAACCAAATATCCTACTGATCAT
GGCGGATGATCTAGGCACTGGGGATCTCGGTTGCTACGGGAACAATACACTGAGAACGCCGAATATTGAC
CAGCTTGCAGAGGAAGGTGTGAGGCTCACTCAGCACCTGGCGGCCGCCCCGCTCTGCACCCCAAGCCGAG
CTGCATTCCTCACAGGGAGACATTCCTTCAGATCAGGCATGGACGCCAGCAATGGATACCGGGCCCTTCA
GTGGAACGCAGGCTCAGGTGGACTCCCTGAGAACGAAACCACTTTTGCAAGAATCTTGCAGCAGCATGGC
TATGCAACCGGCCTCATAGGAAAATGGCACCAGGGTGTGAATTGTGCATCCCGCGGGGATCACTGCCACC
ACCCCCTGAACCACGGATTTGACTATTTCTACGGCATGCCCTTCACGCTCACAAACGACTGTGACCCAGG
CAGGCCCCCCGAAGTGGACGCCGCCCTGAGGGCGCAGCTCTGGGGTTACACCCAGTTCCTGGCGCTGGGG
ATTCTCACCCTGGCTGCCGGCCAGACCTGCGGTTTCTTCTCTGTCTCCGCGAGAGCAGTCACCGGCATGG
CCGGCGTGGGCTGCCTGTTTTTCATCTCTTGGTACTCCTCCTTCGGGTTTGTGCGACGCTGGAACTGTAT
CCTGATGAGAAACCATGACGTCACGGAGCAACCCATGGTTCTGGAGAAAACAGCGAGTCTTATGCTAAAG
GAAGCTGTTTCCTATATTGAAAGACACAAGCATGGGCCATTTCTCCTCTTCCTTTCTTTGCTGCATGTGC
ACATTCCCCTTGTGACCACGAGTGCATTCCTGGGGAAAAGTCAGCATGGCTTATATGGTGATAATGTGGA
GGAGATGGACTGGCTCATAGGTAAGGTTCTTAATGCCATCGAAGACAATGGTTTAAAGAACTCAACATTC
ACGTATTTCACCTCTGACCATGGAGGACATTTAGAGGCAAGAGATGGACACAGCCAGTTAGGGGGATGGA
ACGGAATTTACAAAGGTGGGAAGGGCATGGGAGGATGGGAAGGTGGGATCCGCGTGCCCGGGATCTTCCA
CTGGCCGGGGGTGCTCCCGGCCGGCCGAGTGATTGGAGAGCCCACGAGCCTGATGGACGTGTTCCCTACT
GTGGTCCAGCTGGTGGGTGGCGAGGTGCCCCAGGACAGGGTGATTGATGGCCACAGCCTGGTACCCTTGC
TGCAGGGAGCTGAGGCACGCTCGGCACATGAGTTCCTGTTTCATTACTGTGGGCAGCATCTTCACGCAGC
ACGCTGGCACCAGAAGGACAGTGGAAGCGTCTGGAAGGTTCATTACACGACCCCGCAGTTCCACCCCGAG
GGAGCGGGGGCCTGCTACGGCCGAGGCGTCTGCCCATGCTCCGGGGAGGGCGTGACCCATCACAGACCCC
CTTTGCTCTTTGACCTCTCCAGGGACCCCTCCGAGGCACGGCCCCTGACCCCCGACTCCGAGCCCCTGTA
CCACGCCGTGATAGCAAGGGTAGGTGCCGCGGTGTCGGAGCATCGGCAGACCCTGAGTCCTGTGCCCCAG
CAGTTTTCCATGAGCAACATCCTGTGGAAGCCGTGGCTGCAGCCGTGCTGCGGACATTTCCCGTTCTGTT
CATGCCACGAGGATGGGGATGGCACCCCCTGA

Translation (593 aa):
MRSAARRGRAAPAARDSLPVLLFLCLLLKTCEPKTANAFKPNILLIMADDLGTGDLGCYGNNTLRTPNID
QLAEEGVRLTQHLAAAPLCTPSRAAFLTGRHSFRSGMDASNGYRALQWNAGSGGLPENETTFARILQQHG
YATGLIGKWHQGVNCASRGDHCHHPLNHGFDYFYGMPFTLTNDCDPGRPPEVDAALRAQLWGYTQFLALG
ILTLAAGQTCGFFSVSARAVTGMAGVGCLFFISWYSSFGFVRRWNCILMRNHDVTEQPMVLEKTASLMLK
EAVSYIERHKHGPFLLFLSLLHVHIPLVTTSAFLGKSQHGLYGDNVEEMDWLIGKVLNAIEDNGLKNSTF
TYFTSDHGGHLEARDGHSQLGGWNGIYKGGKGMGGWEGGIRVPGIFHWPGVLPAGRVIGEPTSLMDVFPT
VVQLVGGEVPQDRVIDGHSLVPLLQGAEARSAHEFLFHYCGQHLHAARWHQKDSGSVWKVHYTTPQFHPE
GAGACYGRGVCPCSGEGVTHHRPPLLFDLSRDPSEARPLTPDSEPLYHAVIARVGAAVSEHRQTLSPVPQ
QFSMSNILWKPWLQPCCGHFPFCSCHEDGDGTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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