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Report for CCDS3476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3476.1 Public Homo sapiens 4 ATP10D 24 110 108 CCDS HistoryNCBI Gene:57205Re-query CCDS DB by CCDS ID:3476.1Re-query CCDS DB by GeneID:57205See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3476.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273859.8 ENSP00000273859.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273859.8Link to Ensembl Protein Viewer:ENSP00000273859.3Re-query CCDS DB by Nucleotide ID:ENST00000273859Re-query CCDS DB by Protein ID:ENSP00000273859
Original member Current member NCBI NM_020453.4 NP_065186.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020453.4Link to Protein Sequence:NP_065186.3Re-query CCDS DB by Nucleotide ID:NM_020453Re-query CCDS DB by Protein ID:NP_065186Link to BLAST:NP_065186.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065186.3 1426 Q9P241-1 1426 100% 0 0

Chromosomal Locations for CCDS 3476.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 47512541 47512830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47515476 47515670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47523012 47523216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47525557 47525642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47535509 47535615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47535902 47536033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47536437 47536564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47536686 47536938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47546624 47546862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47554726 47554914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47557664 47558273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47558923 47559029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47560949 47561075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47563581 47563765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47568837 47569146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47572154 47572230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47572872 47572997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47576773 47576973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47580398 47580478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47581960 47582064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47587019 47587206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 47591042 47591381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4281 nt):
ATGACTGAGGCTCTCCAATGGGCCAGATATCACTGGCGACGGCTGATCAGAGGTGCAACCAGGGATGATG
ATTCAGGGCCATACAACTATTCCTCGTTGCTCGCCTGTGGGCGCAAGTCCTCTCAGACCCCTAAACTGTC
AGGAAGGCACCGGATTGTTGTTCCCCACATCCAGCCCTTCAAGGATGAGTATGAGAAGTTCTCCGGAGCC
TATGTGAACAATCGAATACGAACAACAAAGTACACACTTCTGAATTTTGTGCCAAGAAATTTATTTGAAC
AATTTCACAGAGCTGCCAATTTATATTTCCTGTTCCTAGTTGTCCTGAACTGGGTACCTTTGGTAGAAGC
CTTCCAAAAGGAAATCACCATGTTGCCTCTGGTGGTGGTCCTTACAATTATCGCAATTAAAGATGGCCTG
GAAGATTATCGGAAATACAAAATTGACAAACAGATCAATAATTTAATAACTAAAGTTTATAGTAGGAAAG
AGAAAAAATACATTGACCGATGCTGGAAAGACGTTACTGTTGGGGACTTTATTCGCCTCTCCTGCAACGA
GGTCATCCCTGCAGACATGGTACTACTCTTTTCCACTGATCCAGATGGAATCTGTCACATTGAGACTTCT
GGTCTTGATGGAGAGAGCAATTTAAAACAGAGGCAGGTGGTTCGGGGATATGCAGAACAGGACTCTGAAG
TTGATCCTGAGAAGTTTTCCAGTAGGATAGAATGTGAAAGCCCAAACAATGACCTCAGCAGATTCCGAGG
CTTCCTAGAACATTCCAACAAAGAACGCGTGGGTCTCAGTAAAGAAAATTTGTTGCTTAGAGGATGCACC
ATTAGAAACACAGAGGCTGTTGTGGGCATTGTGGTTTATGCAGGCCATGAAACCAAAGCAATGCTGAACA
ACAGTGGGCCACGGTATAAGCGCAGCAAATTAGAAAGAAGAGCAAACACAGATGTCCTCTGGTGTGTCAT
GCTTCTGGTCATAATGTGCTTAACTGGCGCAGTAGGTCATGGAATCTGGCTGAGCAGGTATGAAAAGATG
CATTTTTTCAATGTTCCCGAGCCTGATGGACATATCATATCACCACTGTTGGCAGGATTTTATATGTTTT
GGACCATGATCATTTTGTTACAGGTCTTGATTCCTATTTCTCTCTATGTTTCCATCGAAATTGTGAAGCT
TGGACAAATATATTTCATTCAAAGTGATGTGGATTTCTACAATGAAAAAATGGATTCTATTGTTCAGTGC
CGAGCCCTGAACATCGCCGAGGATCTGGGACAGATTCAGTACCTCTTTTCCGATAAGACAGGAACCCTCA
CTGAGAATAAGATGGTTTTTCGAAGATGTAGTGTGGCAGGATTTGATTACTGCCATGAAGAAAATGCCAG
GAGGTTGGAGTCCTATCAGGAAGCTGTCTCTGAAGATGAAGATTTTATAGACACAGTCAGTGGTTCCCTC
AGCAATATGGCAAAACCGAGAGCCCCCAGCTGCAGGACAGTTCATAATGGGCCTTTGGGAAATAAGCCCT
CAAATCATCTTGCTGGGAGCTCTTTTACTCTAGGAAGTGGAGAAGGAGCCAGTGAAGTGCCTCATTCCAG
ACAGGCTGCTTTCAGTAGCCCCATTGAAACAGACGTGGTACCAGACACCAGGCTTTTAGACAAATTTAGT
CAGATTACACCTCGGCTCTTTATGCCACTAGATGAGACCATCCAAAATCCACCAATGGAAACTTTGTACA
TTATCGACTTTTTCATTGCATTGGCAATTTGCAACACAGTAGTGGTTTCTGCTCCTAACCAACCCCGACA
AAAGATCAGACACCCTTCACTGGGGGGGTTGCCCATTAAGTCTTTGGAAGAGATTAAAAGTCTTTTCCAG
AGATGGTCTGTCCGAAGATCAAGTTCTCCATCGCTTAACAGTGGGAAAGAGCCATCTTCTGGAGTTCCAA
ACGCCTTTGTGAGCAGACTCCCTCTCTTTAGTCGAATGAAACCAGCTTCACCTGTGGAGGAAGAGGTCTC
CCAGGTGTGTGAGAGCCCCCAGTGCTCCAGTAGCTCAGCTTGCTGCACAGAAACAGAGAAACAACACGGT
GATGCAGGCCTCCTGAATGGCAAGGCAGAGTCCCTCCCTGGACAGCCATTGGCCTGCAACCTGTGTTATG
AGGCCGAGAGCCCAGACGAAGCGGCCTTAGTGTATGCCGCCAGGGCTTACCAATGCACTTTACGGTCTCG
GACACCAGAGCAGGTCATGGTGGACTTTGCTGCTTTGGGACCATTAACATTTCAACTCCTACACATCCTG
CCCTTTGACTCAGTAAGAAAAAGAATGTCTGTTGTGGTCCGACACCCTCTTTCCAATCAAGTTGTGGTGT
ATACGAAAGGCGCTGATTCTGTGATCATGGAGTTACTGTCGGTGGCTTCCCCAGATGGAGCAAGTCTGGA
GAAACAACAGATGATAGTAAGGGAGAAAACCCAGAAGCACTTGGATGACTATGCCAAACAAGGCCTTCGT
ACTTTATGTATAGCAAAGAAGGTCATGAGTGACACTGAATATGCAGAGTGGCTGAGGAATCATTTTTTAG
CTGAAACCAGCATTGACAACAGGGAAGAATTACTACTTGAATCTGCCATGAGGTTGGAGAACAAACTTAC
ATTACTTGGTGCTACTGGCATTGAAGACCGTCTGCAGGAGGGAGTCCCTGAATCTATAGAAGCTCTTCAC
AAAGCGGGCATCAAGATCTGGATGCTGACAGGGGACAAGCAGGAGACAGCTGTCAACATAGCTTATGCAT
GCAAACTACTGGAGCCAGATGACAAGCTTTTTATCCTCAATACCCAAAGTAAAGATGCCTGTGGGATGCT
GATGAGCACAATTTTGAAAGAACTTCAGAAGAAAACTCAAGCCCTGCCAGAGCAAGTGTCATTAAGTGAA
GATTTACTTCAGCCTCCTGTCCCCCGGGACTCAGGGTTACGAGCTGGACTCATTATCACTGGGAAGACCC
TGGAGTTTGCCCTGCAAGAAAGTCTGCAAAAGCAGTTCCTGGAACTGACATCTTGGTGTCAAGCTGTGGT
CTGCTGCCGAGCCACACCGCTGCAGAAAAGTGAAGTGGTGAAATTGGTCCGCAGCCATCTCCAGGTGATG
ACCCTTGCTATTGGTGATGGTGCCAATGATGTTAGCATGATACAAGTGGCAGACATTGGGATAGGGGTCT
CAGGTCAAGAAGGCATGCAGGCTGTGATGGCCAGTGACTTTGCCGTTTCTCAGTTCAAACATCTCAGCAA
GCTCCTTCTTGTCCATGGACACTGGTGTTATACACGGCTTTCCAACATGATTCTCTATTTTTTCTATAAG
AATGTGGCCTATGTGAACCTCCTTTTCTGGTACCAGTTCTTTTGTGGATTTTCAGGAACATCCATGACTG
ATTACTGGGTTTTGATCTTCTTCAACCTCCTCTTCACATCTGCCCCTCCTGTCATTTATGGTGTTTTGGA
GAAAGATGTGTCTGCAGAGACCCTCATGCAACTGCCTGAACTTTACAGAAGTGGTCAGAAATCAGAGGCA
TACTTACCCCATACCTTCTGGATCACCTTATTGGATGCTTTTTATCAAAGCCTGGTCTGCTTCTTTGTGC
CTTATTTTACCTACCAGGGCTCAGATACTGACATCTTTGCATTTGGAAACCCCCTGAACACAGCCGCTCT
GTTCATCGTTCTCCTCCATCTGGTCATTGAAAGCAAGAGTTTGACTTGGATTCACTTGCTGGTCATCATT
GGTAGCATCTTGTCTTATTTTTTATTTGCCATAGTTTTTGGAGCCATGTGTGTAACTTGCAACCCACCAT
CCAACCCTTACTGGATTATGCAGGAGCACATGCTGGATCCAGTATTCTACTTAGTTTGTATCCTCACGAC
GTCCATTGCTCTTCTGCCCAGGTTTGTATACAGAGTTCTTCAGGGATCCCTGTTTCCATCTCCAATTCTG
AGAGCTAAGCACTTTGACAGACTAACTCCAGAGGAGAGGACTAAAGCTCTCAAGAAGTGGAGAGGGGCTG
GAAAGATGAATCAAGTGACATCAAAGTATGCTAACCAATCAGCTGGCAAGTCAGGAAGAAGACCCATGCC
TGGCCCTTCTGCTGTATTTGCAATGAAGTCAGCAAGTTCCTGTGCTATTGAGCAAGGAAACTTATCTCTG
TGTGAAACTGCTTTAGATCAAGGCTACTCTGAAACTAAGGCCTTTGAGATGGCTGGACCCTCCAAAGGTA
AAGAAAGCTAG

Translation (1426 aa):
MTEALQWARYHWRRLIRGATRDDDSGPYNYSSLLACGRKSSQTPKLSGRHRIVVPHIQPFKDEYEKFSGA
YVNNRIRTTKYTLLNFVPRNLFEQFHRAANLYFLFLVVLNWVPLVEAFQKEITMLPLVVVLTIIAIKDGL
EDYRKYKIDKQINNLITKVYSRKEKKYIDRCWKDVTVGDFIRLSCNEVIPADMVLLFSTDPDGICHIETS
GLDGESNLKQRQVVRGYAEQDSEVDPEKFSSRIECESPNNDLSRFRGFLEHSNKERVGLSKENLLLRGCT
IRNTEAVVGIVVYAGHETKAMLNNSGPRYKRSKLERRANTDVLWCVMLLVIMCLTGAVGHGIWLSRYEKM
HFFNVPEPDGHIISPLLAGFYMFWTMIILLQVLIPISLYVSIEIVKLGQIYFIQSDVDFYNEKMDSIVQC
RALNIAEDLGQIQYLFSDKTGTLTENKMVFRRCSVAGFDYCHEENARRLESYQEAVSEDEDFIDTVSGSL
SNMAKPRAPSCRTVHNGPLGNKPSNHLAGSSFTLGSGEGASEVPHSRQAAFSSPIETDVVPDTRLLDKFS
QITPRLFMPLDETIQNPPMETLYIIDFFIALAICNTVVVSAPNQPRQKIRHPSLGGLPIKSLEEIKSLFQ
RWSVRRSSSPSLNSGKEPSSGVPNAFVSRLPLFSRMKPASPVEEEVSQVCESPQCSSSSACCTETEKQHG
DAGLLNGKAESLPGQPLACNLCYEAESPDEAALVYAARAYQCTLRSRTPEQVMVDFAALGPLTFQLLHIL
PFDSVRKRMSVVVRHPLSNQVVVYTKGADSVIMELLSVASPDGASLEKQQMIVREKTQKHLDDYAKQGLR
TLCIAKKVMSDTEYAEWLRNHFLAETSIDNREELLLESAMRLENKLTLLGATGIEDRLQEGVPESIEALH
KAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQSKDACGMLMSTILKELQKKTQALPEQVSLSE
DLLQPPVPRDSGLRAGLIITGKTLEFALQESLQKQFLELTSWCQAVVCCRATPLQKSEVVKLVRSHLQVM
TLAIGDGANDVSMIQVADIGIGVSGQEGMQAVMASDFAVSQFKHLSKLLLVHGHWCYTRLSNMILYFFYK
NVAYVNLLFWYQFFCGFSGTSMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQLPELYRSGQKSEA
YLPHTFWITLLDAFYQSLVCFFVPYFTYQGSDTDIFAFGNPLNTAALFIVLLHLVIESKSLTWIHLLVII
GSILSYFLFAIVFGAMCVTCNPPSNPYWIMQEHMLDPVFYLVCILTTSIALLPRFVYRVLQGSLFPSPIL
RAKHFDRLTPEERTKALKKWRGAGKMNQVTSKYANQSAGKSGRRPMPGPSAVFAMKSASSCAIEQGNLSL
CETALDQGYSETKAFEMAGPSKGKES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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