NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS34595.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34595.1 Public Homo sapiens 7 RNF216 24 110 108 CCDS HistoryNCBI Gene:54476Re-query CCDS DB by CCDS ID:34595.1Re-query CCDS DB by GeneID:54476See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34595.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000425013.6 ENSP00000404602.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425013.6Link to Ensembl Protein Viewer:ENSP00000404602.2Re-query CCDS DB by Nucleotide ID:ENST00000425013Re-query CCDS DB by Protein ID:ENSP00000404602
Original member Current member NCBI NM_001377156.1 NP_001364085.1 Accepted alive Link to Nucleotide Sequence:NM_001377156.1Link to Protein Sequence:NP_001364085.1Re-query CCDS DB by Nucleotide ID:NM_001377156Re-query CCDS DB by Protein ID:NP_001364085Link to BLAST:NP_001364085.1
Original member Current member NCBI NM_207116.3 NP_996999.1 Accepted alive Link to Nucleotide Sequence:NM_207116.3Link to Protein Sequence:NP_996999.1Re-query CCDS DB by Nucleotide ID:NM_207116Re-query CCDS DB by Protein ID:NP_996999Link to BLAST:NP_996999.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001364085.1 866 Q9NWF9-2 866 100% 0 0
NP_996999.1 866 Q9NWF9-2 866 100% 0 0

Chromosomal Locations for CCDS 34595.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 5622860 5623179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5624056 5624125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5641154 5641376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5652413 5652510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5711761 5711839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5712715 5712863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5715053 5715190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5716716 5716766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5721033 5721172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5725324 5725438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5729432 5729596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5730715 5730817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5739276 5739352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5740973 5741644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5752846 5752979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5761003 5761069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2601 nt):
ATGGAAGAGGGAAACAACAATGAAGAGGTAATTCACTTGAACAACTTTCACTGCCATCGGGGACAAGAGT
GGATCAATCTCCGAGATGGGCCCATCACCATATCTGACTCCTCAGATGAGGAAAGGATTCCAATGCTGGT
CACCCCAGCTCCTCAGCAGCATGAAGAAGAGGACCTGGATGATGATGTCATCCTGACAGAAGATGATTCT
GAGGATGACTACGGTGAATTTCTGGATCTTGGGCCTCCTGGAATCTCTGAATTCACTAAGCCAAGTGGCC
AAACAGAAAGAGAACCCAAGCCTGGACCGAGTCATAACCAAGCAGCAAATGACATTGTCAACCCCAGATC
AGAGCAGAAAGTCATCATCTTGGAAGAAGGTAGCCTTCTTTACACAGAAAGCGATCCTTTGGAAACTCAG
AACCAGTCATCCGAAGACTCAGAGACAGAGCTGTTATCAAATCTAGGAGAGTCAGCTGCTCTAGCAGATG
ATCAGGCCATCGAAGAAGACTGCTGGTTAGATCATCCTTACTTCCAGTCTCTGAACCAACAGCCCCGTGA
AATAACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGAAGCAGAACTGGGCCGCTTGTTGTTTCAGCAT
GAATTCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAGCAAGGTGGGATTTCAGGCCCCTCTTCTCCTC
AGCCTGCCCATCCTCTAGGAGAGTTTGAAGACCAGCAGTTAGCAAGTGATGATGAAGAGCCAGGTCCAGC
CTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTAGAT
CAAGAGCTCGTTGAACTACTAGTGAAAGAAACGGAAGCAAGATTTCCAGATGTAGCAAATGGGTTTATTG
AGGAAATAATTCATTTTAAGAATTATTATGATCTGAATGTACTTTGTAATTTTCTTCTGGAAAACCCAGA
TTATCCAAAGAGAGAAGACAGAATCATTATAAATCCCAGTAGCAGTCTGCTGGCCAGCCAAGATGAGACA
AAGTTGCCTAAAATAGACTTTTTTGACTATTCTAAATTGACCCCTCTTGACCAGCGCTGCTTCATCCAAG
CTGCTGACCTCCTCATGGCCGACTTCAAAGTGCTCAGTAGTCAGGACATCAAGTGGGCCCTGCACGAGCT
CAAAGGACACTATGCAATCACCCGAAAGGCCTTGTCTGATGCCATTAAAAAATGGCAGGAGCTGTCACCA
GAAACCAGTGGAAAAAGGAAGAAGAGAAAACAAATGAACCAGTATTCTTACATTGATTTCAAGTTTGAAC
AAGGTGACATAAAAATAGAAAAGAGGATGTTCTTTCTTGAAAATAAGCGACGACATTGTAGGTCCTATGA
CCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTATGAGCAGAAAATCAAAGAGATGGCA
GAGCATGAAGACTTTTTGCTTGCCCTACAGATGAATGAAGAACAGTATCAAAAGGATGGCCAGCTGATTG
AGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTG
CAAAGAGTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGAAAGTTGGAGCTCAGCTGCATG
GAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGGTGCTCCCCCAGACCATCCTGTATA
AGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGCTTGTCAGGTGCCCGTC
CTGTAGCTTTCCGGCTCTGTTGGACAGTGATGTGAAGAGGTTCAGCTGTCCTAATCCTCACTGCCGAAAG
GAAACCTGTAGGAAGTGTCAGGGACTCTGGAAAGAACATAATGGCCTCACCTGTGAAGAGCTGGCTGAAA
AAGACGACATCAAGTACCGTACCTCTATTGAAGAAAAAATGACTGCTGCCCGCATTAGAAAATGCCACAA
GTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAACCGCATGTCTTGCCGCTGTGGTGCCCAGATGTGC
TACCTCTGTCGAGTTTCTATTAATGGATATGACCATTTCTGCCAACATCCCCGCTCACCAGGAGCCCCTT
GCCAGGAGTGTTCAAGATGCTCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAAT
CCAGAAGGAGGCTGAAGAGGAACAGAAAAGAAAGAATGGAGAGAACACCTTCAAACGCATTGGACCCCCG
CTGGAGAAGCCTGTGGAGAAGGTGCAGAGGGTGGAGGCCCTCCCGAGGCCCGTTCCGCAGAACCTGCCAC
AGCCACAGATGCCACCCTATGCCTTCGCGCACCCACCCTTCCCCCTGCCTCCCGTGCGGCCTGTGTTCAA
CAACTTCCCACTCAACATGGGGCCTATCCCAGCCCCGTACGTGCCCCCTCTGCCCAACGTGCGGGTCAAC
TATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTGCCCATGCACTTTGGCCCCCAGCCGCGGC
ATCGCTTCTGA

Translation (866 aa):
MEEGNNNEEVIHLNNFHCHRGQEWINLRDGPITISDSSDEERIPMLVTPAPQQHEEEDLDDDVILTEDDS
EDDYGEFLDLGPPGISEFTKPSGQTEREPKPGPSHNQAANDIVNPRSEQKVIILEEGSLLYTESDPLETQ
NQSSEDSETELLSNLGESAALADDQAIEEDCWLDHPYFQSLNQQPREITNQVVPQERQPEAELGRLLFQH
EFPGPAFPRPEPQQGGISGPSSPQPAHPLGEFEDQQLASDDEEPGPAFPMQESQEPNLENIWGQEAAEVD
QELVELLVKETEARFPDVANGFIEEIIHFKNYYDLNVLCNFLLENPDYPKREDRIIINPSSSLLASQDET
KLPKIDFFDYSKLTPLDQRCFIQAADLLMADFKVLSSQDIKWALHELKGHYAITRKALSDAIKKWQELSP
ETSGKRKKRKQMNQYSYIDFKFEQGDIKIEKRMFFLENKRRHCRSYDRRALLPAVQQEQEFYEQKIKEMA
EHEDFLLALQMNEEQYQKDGQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKLELSCM
EGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPHCRK
ETCRKCQGLWKEHNGLTCEELAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMC
YLCRVSINGYDHFCQHPRSPGAPCQECSRCSLWTDPTEDDEKLIEEIQKEAEEEQKRKNGENTFKRIGPP
LEKPVEKVQRVEALPRPVPQNLPQPQMPPYAFAHPPFPLPPVRPVFNNFPLNMGPIPAPYVPPLPNVRVN
YDFGPIHMPLEHNLPMHFGPQPRHRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH