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Report for CCDS33931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33931.1 Public Homo sapiens 4 ZNF141 24 110 108 CCDS HistoryNCBI Gene:7700Re-query CCDS DB by CCDS ID:33931.1Re-query CCDS DB by GeneID:7700See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33931.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000240499.8 ENSP00000240499.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000240499.8Link to Ensembl Protein Viewer:ENSP00000240499.7Re-query CCDS DB by Nucleotide ID:ENST00000240499Re-query CCDS DB by Protein ID:ENSP00000240499
Original member Current member NCBI NM_003441.4 NP_003432.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003441.4Link to Protein Sequence:NP_003432.1Re-query CCDS DB by Nucleotide ID:NM_003441Re-query CCDS DB by Protein ID:NP_003432Link to BLAST:NP_003432.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003432.1 474 Q15928 474 100% 0 0

Chromosomal Locations for CCDS 33931.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 337984 337986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 343782 343908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 344335 344430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 372664 373862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGGAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTG
ACCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTGTTGCTAT
CTCTAACCCAGACCTGGTCACCTGTCTGGAGCAAAGAAAAGAGCCCTACAATGTGAAGATACATAAGATC
GTAGCCAGACCCCCAGCTATGTGTTCTCATTTCACCCAAGACCATTGGCCAGTGCAGGGCATAGAAGATT
CATTCCACAAACTTATACTGAGAAGATATGAGAAATGTGGACATGATAATTTACAATTAAGAAAAGGCTG
TAAAAGTTTGAATGAGTGTAAGTTGCAGAAAGGAGGTTATAATGAATTTAATGAATGCTTGTCAACTACC
CAGAGCAAAATACTTCAGTGTAAAGCAAGTGTCAAAGTTGTTAGTAAATTTTCAAATTCAAACAAACGTA
AGACAAGACATACTGGAGAGAAACACTTTAAAGAATGTGGCAAATCATTTCAGAAGTTTTCACACCTAAC
TCAACATAAGGTAATTCATGCTGGAGAGAAACCCTACACTTGTGAAGAATGTGGCAAAGCCTTTAAATGG
TCTTTAATATTTAATGAACATAAGAGAATTCATACTGGAGAGAAACCTTTTACTTGTGAAGAATGTGGCA
GCATCTTTACCACATCCTCACACTTTGCTAAGCATAAAATAATTCATACTGGAGAAAAACCCTATAAATG
TGAAGAATGTGGCAAAGCCTTTAATAGGTTCACAACCCTTACTAAACATAAGAGAATTCATGCTGGAGAG
AAACCCATCACATGTGAAGAATGTAGGAAAATCTTTACCTCATCCTCAAACTTTGCCAAACATAAGCGAA
TTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAATAGGTCCACAACCCTTAC
TAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCTTTTAGACAG
TCCTCAAAACTGAATGAACATAAGAAAGTTCATACTGGAGAGCGGCCCTACAAATGTGATGAATGTGGCA
AAGCCTTTGGACGGTCCAGGGTCCTGAATGAACATAAAAAAATTCATACTGGAGAGAAACCCTACAAATG
TGAAGAATGTGGCAAAGCCTTTAGACGGTCCACAGATCGGAGTCAACATAAGAAAATTCATAGTGCAGAT
AAACCCTACAAATGTAAAGAATGTGACAAAGCCTTTAAACAATTTTCGCTCCTGAGTCAACATAAGAAAA
TTCATACTGTAGATAAACCCTACAAATGTAAAGATTGTGACAAAGCCTTTAAACGGTTCTCACACCTGAA
TAAACATAAGAAAATTCATACTTGA

Translation (474 aa):
MELLTFRDVAIEFSPEEWKCLDPDQQNLYRDVMLENYRNLVSLGVAISNPDLVTCLEQRKEPYNVKIHKI
VARPPAMCSHFTQDHWPVQGIEDSFHKLILRRYEKCGHDNLQLRKGCKSLNECKLQKGGYNEFNECLSTT
QSKILQCKASVKVVSKFSNSNKRKTRHTGEKHFKECGKSFQKFSHLTQHKVIHAGEKPYTCEECGKAFKW
SLIFNEHKRIHTGEKPFTCEECGSIFTTSSHFAKHKIIHTGEKPYKCEECGKAFNRFTTLTKHKRIHAGE
KPITCEECRKIFTSSSNFAKHKRIHTGEKPYKCEECGKAFNRSTTLTKHKRIHTGEKPYTCEECGKAFRQ
SSKLNEHKKVHTGERPYKCDECGKAFGRSRVLNEHKKIHTGEKPYKCEECGKAFRRSTDRSQHKKIHSAD
KPYKCKECDKAFKQFSLLSQHKKIHTVDKPYKCKDCDKAFKRFSHLNKHKKIHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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