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Report for CCDS33895.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33895.1 Public Homo sapiens 3 DNAJC19 24 110 108 CCDS HistoryNCBI Gene:131118Re-query CCDS DB by CCDS ID:33895.1Re-query CCDS DB by GeneID:131118See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33895.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382564.8 ENSP00000372005.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382564.8Link to Ensembl Protein Viewer:ENSP00000372005.2Re-query CCDS DB by Nucleotide ID:ENST00000382564Re-query CCDS DB by Protein ID:ENSP00000372005
Original member Current member NCBI NM_145261.4 NP_660304.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145261.4Link to Protein Sequence:NP_660304.1Re-query CCDS DB by Nucleotide ID:NM_145261Re-query CCDS DB by Protein ID:NP_660304Link to BLAST:NP_660304.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660304.1 116 Q96DA6-1 116 100% 0 0

Chromosomal Locations for CCDS 33895.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 180984640 180984710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180985926 180985996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180986943 180987022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180988023 180988096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180988178 180988229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180989600 180989602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGCCAGTACAGTGGTAGCAGTTGGACTGACCATTGCTGCTGCAGGATTTGCAGGCCGTTACGTTTTGC
AAGCCATGAAGCATATGGAGCCTCAAGTAAAACAAGTTTTTCAAAGCCTACCAAAATCTGCCTTCAGTGG
TGGCTATTATAGAGGTGGGTTTGAACCCAAAATGACAAAACGGGAAGCAGCATTAATACTAGGTGTAAGC
CCTACTGCCAATAAAGGGAAAATAAGAGATGCTCATCGACGAATTATGCTTTTAAATCATCCTGACAAAG
GAGGATCTCCTTATATAGCAGCCAAAATCAATGAAGCTAAAGATTTACTAGAAGGTCAAGCTAAAAAATG
A

Translation (116 aa):
MASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKREAALILGVS
PTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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