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Report for CCDS33836.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33836.1 Public Homo sapiens 3 IQCB1 24 110 108 CCDS HistoryNCBI Gene:9657Re-query CCDS DB by CCDS ID:33836.1Re-query CCDS DB by GeneID:9657See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33836.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349820.10 ENSP00000323756.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000349820.10Link to Ensembl Protein Viewer:ENSP00000323756.7Re-query CCDS DB by Nucleotide ID:ENST00000349820Re-query CCDS DB by Protein ID:ENSP00000323756
Original member Current member NCBI NM_001023571.4 NP_001018865.2 Accepted alive Link to Nucleotide Sequence:NM_001023571.4Link to Protein Sequence:NP_001018865.2Re-query CCDS DB by Nucleotide ID:NM_001023571Re-query CCDS DB by Protein ID:NP_001018865Link to BLAST:NP_001018865.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018865.2 465 Q15051-2 465 100% 0 0

Chromosomal Locations for CCDS 33836.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 121770345 121770574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121772557 121772713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121781743 121781874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121788284 121788432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121790073 121790215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121807344 121807443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121808916 121809009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121826051 121826180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121828470 121828632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121828861 121828960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1398 nt):
ATGAAGCCAACAGGTACAGACCCAAGGATCTTATCTATAGCTGCTGAAGTTGCAAAAAGCCCTGAGCAGA
ATGTCCCTGTTATACTGTTGAAGTTAAAAGAAATAATAAACATCACACCTTTAGGAAGCTCAGAGTTGAA
GAAAATCAAACAAGATATATATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTAT
TCTCGAATCCAGGGTGGTTGGACTACAATTTCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGGCT
TGGAGCCAGGAGAAGATGCAGAGGAATTTTACAATGAATTACTTCCATCAGCTGCAGAAAATTTTCTAGT
TTTGGGGAGACAATTACAAACATGTTTTATCAATGCAGCTAAGGCTGAAGAAAAAGATGAATTACTACAC
TTTTTCCAAATTGTGACTGATTCTCTCTTCTGGCTTTTGGGAGGCCATGTTGAACTTATTCAGAATGTAC
TACAAAGTGATCATTTCTTACATTTACTGCAAGCTGACAATGTCCAAATAGGATCTGCAGTCATGATGAT
GCTACAGAATATACTACAGATCAACAGATCCAAACGATCAAAGATGTTGCTGGAGATAAATAGGCAGAAG
GAAGAAGAGGACCTCAAATTACAATTGCAACTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGC
AGCTGAGTATGCTCGAAATAGTTCATCCAGGTCAGGTGGAGAAACACTATCGGGAAATGGAAGAGAAATC
AGCACTGATTATCCAGAAACATTGGAGAGGGTACAGGGAAAGGAAAAATTTTCACCAACAGAGGCAGTCT
CTCATAGAGTATAAAGCAGCTGTCACACTTCAAAGAGCAGCGCTTAAATTCCTAGCGAAGTGCCGTAAGA
AAAAGAAACTATTTGCTCCTTGGCGAGGACTCCAAGAACTCACTGATGCACGCCGAGTTGAACTGAAGAA
ACGAGTGGATGACTATGTCAGAAGACATTTGGGCTCTCCAATGTCAGATGTGGTCAGTAGGGAGCTCCAT
GCCCAAGCTCAAGAACGACTGCAACACTACTTTATGGGCAGGGCCCTAGAAGAGCGAGCCCAGCAGCACA
GAGAAGCTCTGATAGCACAGATCAGCACCAACGTTGAACAGCTAATGAAGGCACCAAGTCTGAAGGAGGC
AGAAGGGAAAGAACCTGAGCTCTTCCTAAGTAGATCCAGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCAT
CTCACAACCCTGAAGCACATACAAGCACCCTGGTGGAAGAAGCTTGGAGAAGAATCTGGAGATGAGATTG
ATGTTCCAAAGGATGAGCTTAGTATAGAATTAGAAAATTTATTCATTGGTGGAACCAAACCACCTTAG

Translation (465 aa):
MKPTGTDPRILSIAAEVAKSPEQNVPVILLKLKEIINITPLGSSELKKIKQDIYCYDLIQYCLLVLSQDY
SRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKAEEKDELLH
FFQIVTDSLFWLLGGHVELIQNVLQSDHFLHLLQADNVQIGSAVMMMLQNILQINRSKRSKMLLEINRQK
EEEDLKLQLQLQRQRAMRLSRELQLSMLEIVHPGQVEKHYREMEEKSALIIQKHWRGYRERKNFHQQRQS
LIEYKAAVTLQRAALKFLAKCRKKKKLFAPWRGLQELTDARRVELKKRVDDYVRRHLGSPMSDVVSRELH
AQAQERLQHYFMGRALEERAQQHREALIAQISTNVEQLMKAPSLKEAEGKEPELFLSRSRPVAAKAKQAH
LTTLKHIQAPWWKKLGEESGDEIDVPKDELSIELENLFIGGTKPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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